BLASTX nr result

ID: Dioscorea21_contig00018056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018056
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454197.1| hypothetical protein SORBIDRAFT_04g026480 [S...   274   2e-71
ref|NP_001106008.1| transcription factor MYB39 [Zea mays] gi|891...   272   6e-71
ref|NP_001152064.1| myb-related protein Myb4 [Zea mays] gi|19565...   269   6e-70
gb|AFW63053.1| putative MYB DNA-binding domain superfamily prote...   268   8e-70
gb|AFW72399.1| putative MYB DNA-binding domain superfamily prote...   265   7e-69

>ref|XP_002454197.1| hypothetical protein SORBIDRAFT_04g026480 [Sorghum bicolor]
           gi|241934028|gb|EES07173.1| hypothetical protein
           SORBIDRAFT_04g026480 [Sorghum bicolor]
          Length = 258

 Score =  274 bits (700), Expect = 2e-71
 Identities = 144/276 (52%), Positives = 183/276 (66%), Gaps = 14/276 (5%)
 Frame = -3

Query: 815 MVRAPCCEKMGLKKGPWTSEEDQILITHIQRFGHGNWRALPKQAGLLRCGKSCRLRWINY 636
           M RAPCCEKMGLK+GPWT EED++L+ HI+R GH NWRALPKQAGLLRCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDRVLVAHIERHGHSNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 635 LRPDIKRGNFSREEEETIISLHQLLGNKWSAIASRLPGRTDNEIKNVWHTHLKKRVK--- 465
           LRPDIKRGNF+ EEE+ II LHQ+LGN+WSAIA+RLPGRTDNEIKNVWHTHLKKR++   
Sbjct: 61  LRPDIKRGNFTAEEEDAIIQLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEPTT 120

Query: 464 QEAGQTLKQEPKRIKGTDQDNKKLM----NVNDIHPVSPERSYSTDISSSCTELSNFASK 297
           + A Q  K++PK+ +   +              + PVSPE+S ST  +S+ T+ S  +S 
Sbjct: 121 KPASQAPKRKPKKQQQQPETTAVTALEGPTTGAVVPVSPEQSLSTSTTSTTTDYSAASSM 180

Query: 296 EQCMDSS------EEVPVIEDSFWSEALSMDTSTNSTAAVEYTPFGCGFGYGYDQNYITA 135
           E   DSS      EE   I+DSFWSE L+M   ++                  D + + A
Sbjct: 181 ENNADSSTSEEEEEEDYQIDDSFWSETLAMTVDSS------------------DDSGMQA 222

Query: 134 PFNDPFNCTDVSYNDHMSFWLKM-LESGDLQELPEI 30
            F    +    + +D M FWLK+ +++GD+Q LP+I
Sbjct: 223 AFGGAPSSVTSTNDDDMDFWLKLFMQAGDMQNLPQI 258


>ref|NP_001106008.1| transcription factor MYB39 [Zea mays] gi|89143147|emb|CAJ42203.1|
           transcription factor MYB39 [Zea mays]
           gi|323388601|gb|ADX60105.1| ZmMYB39 transcription factor
           [Zea mays]
          Length = 256

 Score =  272 bits (696), Expect = 6e-71
 Identities = 150/272 (55%), Positives = 182/272 (66%), Gaps = 10/272 (3%)
 Frame = -3

Query: 815 MVRAPCCEKMGLKKGPWTSEEDQILITHIQRFGHGNWRALPKQAGLLRCGKSCRLRWINY 636
           M R+PCCEKMGLK+GPWT+EED+IL+ H++R GH NWRALPKQAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKMGLKRGPWTAEEDRILVVHVERHGHSNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 635 LRPDIKRGNFSREEEETIISLHQLLGNKWSAIASRLPGRTDNEIKNVWHTHLKKRVKQEA 456
           LRPDIKRGNFSREEE+ II LHQ+LGN+WS IA+RLPGRTDNEIKNVWHTHLKKR+  EA
Sbjct: 61  LRPDIKRGNFSREEEDAIIQLHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRL--EA 118

Query: 455 GQTLKQEPKRIKGTDQDNKKLMNVND----IHPVSPERSYSTDIS--SSCTELSNFASKE 294
               +Q PKR     Q  + +  +      + PVSPERS ST  S  +S  + S  +S E
Sbjct: 119 QPASQQAPKRKPTKKQQPEPVTTLEGPAGAVPPVSPERSLSTTTSTTTSTADYSAASSLE 178

Query: 293 QCMD---SSEEVPVIEDSFWSEALSMDTSTNSTAAVEYTPFGCGFGYGYDQNYITAPFND 123
              D   S E+   I+DSFWSE L+M T+ +S  +      G  FG         AP   
Sbjct: 179 NADDSFTSEEDYYQIDDSFWSETLAMTTTVDSFESGVQQAEG-SFGAS-----AAAP--- 229

Query: 122 PFNCTDVSYNDHMSFWLKM-LESGDLQELPEI 30
                  S ND M FWLK+ +++ D+Q LP+I
Sbjct: 230 ------SSTNDDMDFWLKLFMQASDMQNLPQI 255


>ref|NP_001152064.1| myb-related protein Myb4 [Zea mays] gi|195652243|gb|ACG45589.1|
           myb-related protein Myb4 [Zea mays]
          Length = 257

 Score =  269 bits (687), Expect = 6e-70
 Identities = 149/271 (54%), Positives = 182/271 (67%), Gaps = 9/271 (3%)
 Frame = -3

Query: 815 MVRAPCCEKMGLKKGPWTSEEDQILITHIQRFGHGNWRALPKQAGLLRCGKSCRLRWINY 636
           M R+PCCEKMGLK+GPWT+EED+IL+ H++R GH NWRALPKQAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKMGLKRGPWTAEEDRILVAHVERHGHSNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 635 LRPDIKRGNFSREEEETIISLHQLLGNKWSAIASRLPGRTDNEIKNVWHTHLKKRV--KQ 462
           LRPDIKRGNFSREEE+ II LHQ+LGN+WS IA+RLPGRTDNEIKNVWHTHLKKR+  K 
Sbjct: 61  LRPDIKRGNFSREEEDAIIQLHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLEPKP 120

Query: 461 EAGQTLKQEP-KRIKGTDQDNKKLMNVNDIHPVSPERSYSTDIS--SSCTELSNFASKEQ 291
            + Q  K++P K+ +   +    L       PVSPERS ST  S  +S  + S  +S E 
Sbjct: 121 ASQQAPKRKPTKKQQPQPEPVTALEGPTGAVPVSPERSLSTTTSTTTSTADYSAASSLEN 180

Query: 290 CMD---SSEEVPVIEDSFWSEALSMDTSTNSTAAVEYTPFGCGFGYGYDQNYITAPFNDP 120
             D   S E+   I+DSFWSE L+M T+ +S  +      G  FG         AP    
Sbjct: 181 AGDSFTSEEDYYQIDDSFWSETLAMTTTVDSFESGVQQAEG-SFGKS------AAP---- 229

Query: 119 FNCTDVSYNDHMSFWLKM-LESGDLQELPEI 30
                 S ND M FWLK+ +++ D+Q LP+I
Sbjct: 230 ----PSSTNDDMDFWLKLFMQASDMQNLPQI 256


>gb|AFW63053.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 260

 Score =  268 bits (686), Expect = 8e-70
 Identities = 145/274 (52%), Positives = 183/274 (66%), Gaps = 12/274 (4%)
 Frame = -3

Query: 815 MVRAPCCEKMGLKKGPWTSEEDQILITHIQRFGHGNWRALPKQAGLLRCGKSCRLRWINY 636
           M R+PCCEKMGLK+GPWT+EED+IL+ H++R GH NWRALPKQAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKMGLKRGPWTAEEDRILVAHVERHGHSNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 635 LRPDIKRGNFSREEEETIISLHQLLGNKWSAIASRLPGRTDNEIKNVWHTHLKKRV--KQ 462
           LRPDIKRGNFSREEE+ II LHQ+LGN+WS IA+RLPGRTDNEIKNVWHTHLKKR+  K 
Sbjct: 61  LRPDIKRGNFSREEEDAIIQLHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLEPKP 120

Query: 461 EAGQTLKQEPKRIKGTDQDNKKLMNVND----IHPVSPERSYSTDIS--SSCTELSNFAS 300
            + Q  K++P + +    + + +  +      + PV+PERS ST  S  +S  + S  +S
Sbjct: 121 ASQQAPKRKPTKKQQPQPEPEPVTTLEGPAGAVPPVAPERSLSTTTSTTTSTADYSPASS 180

Query: 299 KEQCMD---SSEEVPVIEDSFWSEALSMDTSTNSTAAVEYTPFGCGFGYGYDQNYITAPF 129
            E   D   S E+   I+DSFWSE L+M T+ +S  +      G     G       AP 
Sbjct: 181 LENAGDSFTSEEDYYQIDDSFWSETLAMTTTVDSFES------GVQQAEGSFGKSAAAP- 233

Query: 128 NDPFNCTDVSYNDHMSFWLKM-LESGDLQELPEI 30
                    S ND M FWLK+ +++ D+Q LP+I
Sbjct: 234 --------SSTNDDMDFWLKLFMQASDMQNLPQI 259


>gb|AFW72399.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 244

 Score =  265 bits (678), Expect = 7e-69
 Identities = 146/266 (54%), Positives = 177/266 (66%), Gaps = 4/266 (1%)
 Frame = -3

Query: 815 MVRAPCCEKMGLKKGPWTSEEDQILITHIQRFGHGNWRALPKQAGLLRCGKSCRLRWINY 636
           M RAPCCEKMGLK+GPWT EED+IL+ HI+R GH NWRALPKQAGL RCGKSCRLRWINY
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDRILVAHIERHGHSNWRALPKQAGLPRCGKSCRLRWINY 60

Query: 635 LRPDIKRGNFSREEEETIISLHQLLGNKWSAIASRLPGRTDNEIKNVWHTHLKKRVKQEA 456
           LRPDIKRGNF+REEE+ +I LHQ+LGN+WSAIA+RLPGRTDNEIKNVWHTHLKKR++   
Sbjct: 61  LRPDIKRGNFTREEEDAVIQLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEP-- 118

Query: 455 GQTLKQEPKRIKGTDQDNKKLMNVNDIHPVSPERSYSTDISSSCTELSNFASKEQCMD-- 282
            +T  Q PKR     Q  +    V    PVSPE+S ST  +S+ T+ S  +S  +  D  
Sbjct: 119 -KTATQAPKRKPKKQQQPEA---VTLAAPVSPEQSVSTSTTSTTTDYSAASSSLENADSF 174

Query: 281 -SSEEVPVIEDSFWSEALSMDTSTNSTAAVEYTPFGCGFGYGYDQNYITAPFNDPFNCTD 105
            S EE   I+DSFWSE L+M        AV+ +  G     G       AP         
Sbjct: 175 TSEEEDYQIDDSFWSETLAM--------AVDSSDSGMEEAEGAFGASPPAP--------- 217

Query: 104 VSYNDHMSFWLKM-LESGDLQELPEI 30
            S ND + FWLK+ +++ D+Q  P+I
Sbjct: 218 -STNDDVDFWLKLFMQASDMQNSPQI 242


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