BLASTX nr result
ID: Dioscorea21_contig00018021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00018021
(2915 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 244 1e-61
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 228 7e-57
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 226 4e-56
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 225 6e-56
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga... 224 8e-56
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 244 bits (622), Expect = 1e-61
Identities = 187/688 (27%), Positives = 311/688 (45%), Gaps = 29/688 (4%)
Frame = +3
Query: 582 KMNFPSVWIAWIESCLRSTSFSFLINGQPSPWIKSCRGVRQGDPLSSSIFILVSQNLTSI 761
KM F WI+WI C+ + + LINGQP I RG+RQGDPLS +FIL ++ L +
Sbjct: 379 KMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIAN 438
Query: 762 LNYALAVGMIPGYDSGLRSN-FNHLMFADDLVIISNASRKAVRAIKLALDYYKSFSGQSL 938
+ A +I G S +HL+FADD + A+++ I L Y+S SGQ +
Sbjct: 439 IRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQI 498
Query: 939 NASKSSIYFPTWANTIVAASISSILHIPRASFPFKYLGVYISTRRLAKGVFDPLVDSVRL 1118
N SKSSI F + A I IL I YLG+ S VF + D ++
Sbjct: 499 NFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQS 558
Query: 1119 RCARWTNSKLSPAAKAILINSTLLSLPIYYLSVYPIHDSVLAEINRIVRRFFWSKSSNGK 1298
R W+ LS K ++I S +LP Y +S + + ++ +++ V +F+WS + + +
Sbjct: 559 RINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSR 618
Query: 1299 GIHSVSWSDLINSKPEGGLAIRNLFLMKHALMAKNVMKYINSEDSIWVDILHLKYGTLNF 1478
G+H ++W L +SK +GGL RN+ AL+AK + + I + DS++ + +Y +
Sbjct: 619 GMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKS- 677
Query: 1479 WHNPIPA----GCSWFFRGLCRSALKIIPDVRLLSLNPLNTSIWHHPWCSDIPFAW-SPS 1643
NP+ + S+ +R + + + + + + S+W+ PW IP + P+
Sbjct: 678 --NPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPW---IPAQFPRPA 732
Query: 1644 CFNINLCSTLNFVSDL--TGHNGWDLDNLGLLFGAHMDDYMLRLGFLVDNEPNHWIWSHK 1817
+ ++ V L + N W++D L LF + L N + W
Sbjct: 733 KYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFT 792
Query: 1818 AIHGSLSASVYHHLNVHATGSDTWIG------WKQLWDLNVAPKVKHFLWLVFKGRVSTF 1979
S YH + T IG +W + PK++HFLW + G V
Sbjct: 793 KAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVS 852
Query: 1980 EFLSSINLGPRNACVMCNLENESIEHLLYSCHKSKEIWETVGVKLAINVVFPDG--FCSG 2153
E L + CV C ESI H L+ CH +++IW + A +FP F +
Sbjct: 853 ENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPG-IFPSNSIFTNL 911
Query: 2154 SWLTGTHFTGFAKSIFASTAWFIWKNRCDIIFRNL-RAPCSVIV-----------SRAFA 2297
L +G + + W+IWK R + +F N+ + P +++ ++
Sbjct: 912 DHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEAQVEL 971
Query: 2298 HSRGYSRGSLDRRGLRFVINNSPSFNGNLLFIS*FWSEATEVGGSGFICVSTNGSYVLAG 2477
HS + S+D R ++ +F+G FI W + + G+G+ C+S+ G G
Sbjct: 972 HSERHGSLSIDSRIRVRDVSQDTTFSGFRCFIDGSWKASDQFSGTGWFCLSSLGESPTMG 1031
Query: 2478 AIPFRAANRAV-AELLAIYFALHALIDA 2558
A R + + E+ A+ +A+ +I A
Sbjct: 1032 AANVRRSLSPLHTEMEALLWAMKCMIGA 1059
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 228 bits (581), Expect = 7e-57
Identities = 172/663 (25%), Positives = 307/663 (46%), Gaps = 34/663 (5%)
Frame = +3
Query: 585 MNFPSVWIAWIESCLRSTSFSFLINGQPSPWIKSCRGVRQGDPLSSSIFILVSQNLTSIL 764
+ F + WI+WI +C+ S S+S LINGQP I RG+RQGDPLS ++F+L ++ L IL
Sbjct: 595 LGFNNKWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHIL 654
Query: 765 NYALAVGMIPGYD-SGLRSNFNHLMFADDLVIISNASRKAVRAIKLALDYYKSFSGQSLN 941
N A G I G + + NHL+FADD +++ A+++ + L Y SGQ +N
Sbjct: 655 NKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMIN 714
Query: 942 ASKSSIYFPTWANTIVAASISSILHIPRASFPFKYLGVYISTRRLAKGVFDPLVDSVRLR 1121
+KS+I F + + I S I KYLG+ + +F + + ++ R
Sbjct: 715 LNKSAITFGKNVDIQIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSR 774
Query: 1122 CARWTNSKLSPAAKAILINSTLLSLPIYYLSVYPIHDSVLAEINRIVRRFFWSKSSNGKG 1301
W LS K +L+ S L+LP+Y +S + + ++ ++ ++ F+W+ +
Sbjct: 775 LTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRK 834
Query: 1302 IHSVSWSDLINSKPEGGLAIRNLFLMKHALMAKNVMKYINSEDSIWVDILHLKY-GTLNF 1478
IH +SW L K +GG ++L AL+AK + + + S++ + +Y +F
Sbjct: 835 IHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDF 894
Query: 1479 WHNPIPAGCSWFFRGLCRSALKIIPDVRLLSLNPLNTSIWHHPWCSDIPFAWSPSCFN-- 1652
+ S+ +R + ++ +R + N T +W W D + N
Sbjct: 895 LSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHD---GSNRRPLNRR 951
Query: 1653 --INLCSTLNFVSDLTGHNGWDLDNLGLLFGAHMDDYMLRLGFLVDNEPNH-WIWSHKAI 1823
IN+ ++ + D T N W+L+ L LF + +L+ L E + W+ SH +
Sbjct: 952 RFINVDLKVSQLIDPTSRN-WNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGL 1010
Query: 1824 HG------SLSASVYHHLNVHATGSDTWIG-WKQLWDLNVAPKVKHFLWLVFKGRVSTFE 1982
+ LS V+H L A + + ++W+L+ APK++ FLW G + +
Sbjct: 1011 YSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVED 1070
Query: 1983 FLSSINLGPRNACVMCNLENESIEHLLYSCHKSKEIWETVGVKLAINVVFPDGFCSGSWL 2162
L + + + C+MC+ ENE+I H+L+ C ++++W + A GS
Sbjct: 1071 RLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSA-----------GSEF 1119
Query: 2163 TGTHFTGFAKSI-------------FAS--TAWFIWKNRCDIIFRNLRAPCSVIVSRAF- 2294
+ + +T ++ I F S WF+WKNR ++F + + +V +A+
Sbjct: 1120 SNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYE 1179
Query: 2295 AHSRGYSRGS---LDRRGLRFVINNSPSFNGNL-LFIS*FWSEATEVGGSGFICVSTNGS 2462
A+ +S + D + L+ + P G L I WS+ G+ ++ + G
Sbjct: 1180 AYHEWFSAQTHMQNDEKHLK-ITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGK 1238
Query: 2463 YVL 2471
+L
Sbjct: 1239 VLL 1241
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 226 bits (575), Expect = 4e-56
Identities = 171/684 (25%), Positives = 302/684 (44%), Gaps = 15/684 (2%)
Frame = +3
Query: 591 FPSVWIAWIESCLRSTSFSFLINGQPSPWIKSCRGVRQGDPLSSSIFILVSQNLT-SILN 767
FP I I L+ +S + L NG P K RG+RQGDPL+ +F LV + L I
Sbjct: 602 FPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQT 661
Query: 768 YALAVGMIPGYDSGLRSNFNHLMFADDLVIISNASRKAVRAIKLALDYYKSFSGQSLNAS 947
A P + + + +HL FADDL++ AS + + LD + + SG +N S
Sbjct: 662 RVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFS 721
Query: 948 KSSIYFPTWANTIVAASISSILHIPRASFPFKYLGVYISTRRLAKGVFDPLVDSVRLRCA 1127
KS ++ + N + +I SIL +P A YLG+ + R+++ F+ ++D +R + +
Sbjct: 722 KSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLS 781
Query: 1128 RWTNSKLSPAAKAILINSTLLSLPIYYLSVYPIHDSVLAEINRIVRRFFWSKSSNGKGIH 1307
W S L+ A + +L+ ++L ++P Y + V + S EI++ R F W +N + +H
Sbjct: 782 SWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLH 841
Query: 1308 SVSWSDLINSKPEGGLAIRNLFLMKHALMAKNVMKYINSEDSIWVDILHLKY-GTLNFWH 1484
SV+W+++ + EGGL +R A + K + ++ D +WV +L KY +F H
Sbjct: 842 SVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLH 901
Query: 1485 NPIPAGCSWFFRGLCRSALKIIPDVRLLSLNPLNTSIWHHPWCSDIPFAWSPSCFNINLC 1664
+ CSW +R + + + ++ N + W+ W D P A + C N
Sbjct: 902 LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHM 961
Query: 1665 STLNFVSDLTGHNGWDLDNLGLLFGAHMDDYMLRLGFLVDNEPNHWI-WSHKAIHGSLSA 1841
+ + +T WD L + +M D + +++E ++ W H G ++
Sbjct: 962 TDIKVEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTT-GMVTV 1020
Query: 1842 SVYHHLNVHATGSDTWIGWKQLWDLNVAPKVKHFLWLVFKGRVSTFEFLSSINLGPRNAC 2021
S + L G D W +W K+K F+W + K + L +C
Sbjct: 1021 SSAYSLIAGHDGDDRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASC 1078
Query: 2022 VMCNLENESIEHLLYSCHKSKEIWETVGVKLAINVVFPDGFCSGSWL----TGTHFTGFA 2189
+C E+E+++HL C ++ W++ L + SW+ + G++
Sbjct: 1079 PVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQT--SNHLHMHSWMKAACSSQQKDGYS 1136
Query: 2190 KS---IFASTAWFIWKNRCDIIFRNLRAPCSVIVSRAFAHSRGYSRGSLDRRGLR----- 2345
+ IF W +WK R ++F N S I++R+F S R GL+
Sbjct: 1137 TNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQT 1196
Query: 2346 FVINNSPSFNGNLLFIS*FWSEATEVGGSGFICVSTNGSYVLAGAIPFRAANRAVAELLA 2525
+V+ + P+ L + + +G + + NG +V AN +AEL
Sbjct: 1197 WVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWG 1256
Query: 2526 IYFALHALIDAGTWFDQVFTTSDS 2597
+ L L+ F ++ +DS
Sbjct: 1257 LREGL--LLAKNRGFTKLIAETDS 1278
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 225 bits (573), Expect = 6e-56
Identities = 171/684 (25%), Positives = 301/684 (44%), Gaps = 15/684 (2%)
Frame = +3
Query: 591 FPSVWIAWIESCLRSTSFSFLINGQPSPWIKSCRGVRQGDPLSSSIFILVSQNLT-SILN 767
FP I I L+ +S + L NG P K RG+RQGDPL+ +F LV + L I
Sbjct: 602 FPRRLIDLILFSLQESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQT 661
Query: 768 YALAVGMIPGYDSGLRSNFNHLMFADDLVIISNASRKAVRAIKLALDYYKSFSGQSLNAS 947
A P + + + +HL FADDL++ AS + + LD + + SG +N S
Sbjct: 662 RVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFS 721
Query: 948 KSSIYFPTWANTIVAASISSILHIPRASFPFKYLGVYISTRRLAKGVFDPLVDSVRLRCA 1127
KS ++ + N + +I SIL +P A YLG+ + R+++ F+ ++D +R + +
Sbjct: 722 KSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLS 781
Query: 1128 RWTNSKLSPAAKAILINSTLLSLPIYYLSVYPIHDSVLAEINRIVRRFFWSKSSNGKGIH 1307
W S L+ A + +L+ ++L ++P Y + V + S EI++ R F W +N + +H
Sbjct: 782 SWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLH 841
Query: 1308 SVSWSDLINSKPEGGLAIRNLFLMKHALMAKNVMKYINSEDSIWVDILHLKY-GTLNFWH 1484
SV+W+++ + EGGL +R A + K + ++ D +WV +L KY +F H
Sbjct: 842 SVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLH 901
Query: 1485 NPIPAGCSWFFRGLCRSALKIIPDVRLLSLNPLNTSIWHHPWCSDIPFAWSPSCFNINLC 1664
+ CSW +R + + + ++ N + W+ W D P A + C N
Sbjct: 902 LQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHM 961
Query: 1665 STLNFVSDLTGHNGWDLDNLGLLFGAHMDDYMLRLGFLVDNEPNHWI-WSHKAIHGSLSA 1841
+ + +T WD L + +M D + +++E ++ W H G ++
Sbjct: 962 TDIKVEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTT-GMVTV 1020
Query: 1842 SVYHHLNVHATGSDTWIGWKQLWDLNVAPKVKHFLWLVFKGRVSTFEFLSSINLGPRNAC 2021
S + L G D W +W K+K F+W + K + L +C
Sbjct: 1021 SSAYSLIAGHDGDDRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASC 1078
Query: 2022 VMCNLENESIEHLLYSCHKSKEIWETVGVKLAINVVFPDGFCSGSWL----TGTHFTGFA 2189
+C E+E+++HL C ++ W++ L + SW+ + G+
Sbjct: 1079 PVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQT--SNHLHMHSWMKAACSSQQKDGYG 1136
Query: 2190 KS---IFASTAWFIWKNRCDIIFRNLRAPCSVIVSRAFAHSRGYSRGSLDRRGLR----- 2345
+ IF W +WK R ++F N S I++R+F S R GL+
Sbjct: 1137 TNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQT 1196
Query: 2346 FVINNSPSFNGNLLFIS*FWSEATEVGGSGFICVSTNGSYVLAGAIPFRAANRAVAELLA 2525
+V+ + P+ L + + +G + + NG +V AN +AEL
Sbjct: 1197 WVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWG 1256
Query: 2526 IYFALHALIDAGTWFDQVFTTSDS 2597
+ L L+ F ++ +DS
Sbjct: 1257 LREGL--LLAKNRGFTKLIAETDS 1278
>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1380
Score = 224 bits (572), Expect = 8e-56
Identities = 179/606 (29%), Positives = 282/606 (46%), Gaps = 42/606 (6%)
Frame = +3
Query: 582 KMNFPSVWIAWIESCLRSTSFSFLINGQPSPWIKSCRGVRQGDPLSSSIFILVSQNLTSI 761
KMNFP W WI++C+ + S S LING PSP K +G+RQGDPLS +F+LV + L +
Sbjct: 592 KMNFPIQWRQWIQTCVTTASSSVLINGSPSPPFKLQKGLRQGDPLSPFLFVLVVETLNLL 651
Query: 762 LNYALAVGMIPGYD---SGLRSNFNHLMFADDLVIISNASRKAVRAIKLALDYYKSFSGQ 932
+N A+++G G + GL+ +HL +ADD +I ++ IK L + SG
Sbjct: 652 INKAISLGFWEGVEVSKGGLK--LSHLQYADDTLIFCAPRIDYLQNIKKVLILFHLASGL 709
Query: 933 SLNASKSSIYFPTWANTIVAASISSILHIPRASFPFKYLGVYISTRRLAKGVFDPLVDSV 1112
+N KSS+ +N + + +S+L S PF YLG+ I ++P+++ +
Sbjct: 710 QINFHKSSLIGINVSNQWMKDATASLL-CKGGSLPFNYLGLPIGGDSSRIKTWEPILERI 768
Query: 1113 RLRCARWTNSKLSPAAKAILINSTLLSLPIYYLSVYPIHDSVLAEINRIVRRFFWSKSSN 1292
+ W LS + LI S++ SLP+Y++S++PI SV+ +IN++ R F WS
Sbjct: 769 SKKLDSWKGRLLSIGGRVTLIKSSISSLPLYFMSLFPIPRSVIEQINKLQRHFLWSGDRG 828
Query: 1293 GKGIHSVSWSDLINSKPEGGLAIRNLFLMKHALMAKNVMKYINSEDSIWVDILHLKYG-- 1466
+ + V+W + K GGL I N+F AL+ K + K+ N +W +++ KY
Sbjct: 829 KRALSQVAWKVIELPKAFGGLGIGNIFHRNLALLFKWIWKFFNDTSPLWRELIWHKYKYK 888
Query: 1467 ---TLNFWHNPIPAGCSWFFRGLCRSALKIIPDVRLLSLNPLN--------TSIWHHPWC 1613
T+ P G W SA+ P + +++N + T WH W
Sbjct: 889 QPLTIRDLDPPRQGG-PW---QKIVSAIIKSPTAKAIAINGVRSLVGDGALTLFWHDQWL 944
Query: 1614 SDIPF-AWSPSCFNINLCSTLNFVSDLTGHNGWDLDNLGLLFGAHMD------------- 1751
P A P + + N ++ + H WD GL +
Sbjct: 945 GPKPLKAQFPRLYLL----ATNKMAPVASHCFWD----GLAWAWSFSWARHHRARDLDEK 996
Query: 1752 DYMLRLGFLVDNEPNH---WIWS-HKAIHGSLSASVYHHLNVHATGSDTWIGWKQLWDLN 1919
+ +L L +V +P++ +WS HK+ GS S S + A K +W
Sbjct: 997 EKLLELLDMVHLDPSNQDSLVWSYHKS--GSFSTSSFTAEMAKANLPPHTDAIKGVWVGL 1054
Query: 1920 VAPKVKHFLWLVFKGRVSTFEFLSSINLGPR--NACVMCNLENESIEHLLYSCHKSKEIW 2093
V +V+ F+W+ GR++T L+SI + P+ N CV+CN E HLL C S +W
Sbjct: 1055 VPHRVEIFVWMALLGRINTRCKLASIGIIPQSENICVLCNTSPEQHNHLLLHCPFSLSLW 1114
Query: 2094 ETVGVKLAINVVFPDGF--CSGSWLTGTHFTGFAKSIFAST----AWFIWKNRCDIIFRN 2255
+ V P+ WL+ T F K ++A+T +W IWK R IF N
Sbjct: 1115 NWWLDLWRLKWVLPETLRGLFDQWLSPIK-TPFFKKVWAATFFIISWSIWKERNSRIFEN 1173
Query: 2256 LRAPCS 2273
+P S
Sbjct: 1174 TSSPPS 1179