BLASTX nr result

ID: Dioscorea21_contig00017981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017981
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...   404   e-110
emb|CBI24106.3| unnamed protein product [Vitis vinifera]              404   e-110
emb|CBI27495.3| unnamed protein product [Vitis vinifera]              400   e-109
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...   400   e-109
ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106

>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
            chloroplastic-like [Vitis vinifera]
          Length = 609

 Score =  404 bits (1039), Expect = e-110
 Identities = 189/305 (61%), Positives = 252/305 (82%)
 Frame = -3

Query: 1097 SLYASLISSFAVIREAEMAESLFQEAKKKAMVKDLAVFLKLVVMYVDVGLEEKAVGVVEA 918
            ++Y+SLI SFA IRE ++AE LF+EA++K +++D  VFLKLV+MYV+ GL E+ + +V+A
Sbjct: 296  AVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKA 355

Query: 917  MVEMKIWVTDCILCAIVNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLGL 738
            M  +KI V+DCI CAIVNG+ ++RGL+A+  VY+ LI  GCEPGQVTYAS+I++Y R+ L
Sbjct: 356  MKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMEL 415

Query: 737  PLKAEALFLEMMEKGFNRCLVAYSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYNT 558
              KAE +F EM +KGFN+C+VAYS+M+ MYGK GR  +AM+L+AKMKE GCKPNVWVYN+
Sbjct: 416  YSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNS 475

Query: 557  LLDMHGRLVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECIKYYHEFKMNG 378
            L+DMHGR+ NLRQVEK+WKEMKR+K+  D+ SYTS+I AY+KAG+FE C+++YHEF+MNG
Sbjct: 476  LMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNG 535

Query: 377  GKLDRALCGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQVE 198
            G +DR + GIM  +FSKS R+DEL+KLLQ+MK+EG   DERLY+SALNALRDA L +Q  
Sbjct: 536  GVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQAR 595

Query: 197  WFQKN 183
            W Q++
Sbjct: 596  WLQES 600


>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  404 bits (1039), Expect = e-110
 Identities = 189/305 (61%), Positives = 252/305 (82%)
 Frame = -3

Query: 1097 SLYASLISSFAVIREAEMAESLFQEAKKKAMVKDLAVFLKLVVMYVDVGLEEKAVGVVEA 918
            ++Y+SLI SFA IRE ++AE LF+EA++K +++D  VFLKLV+MYV+ GL E+ + +V+A
Sbjct: 219  AVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIVKA 278

Query: 917  MVEMKIWVTDCILCAIVNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLGL 738
            M  +KI V+DCI CAIVNG+ ++RGL+A+  VY+ LI  GCEPGQVTYAS+I++Y R+ L
Sbjct: 279  MKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMEL 338

Query: 737  PLKAEALFLEMMEKGFNRCLVAYSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYNT 558
              KAE +F EM +KGFN+C+VAYS+M+ MYGK GR  +AM+L+AKMKE GCKPNVWVYN+
Sbjct: 339  YSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYNS 398

Query: 557  LLDMHGRLVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECIKYYHEFKMNG 378
            L+DMHGR+ NLRQVEK+WKEMKR+K+  D+ SYTS+I AY+KAG+FE C+++YHEF+MNG
Sbjct: 399  LMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNG 458

Query: 377  GKLDRALCGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQVE 198
            G +DR + GIM  +FSKS R+DEL+KLLQ+MK+EG   DERLY+SALNALRDA L +Q  
Sbjct: 459  GVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQAR 518

Query: 197  WFQKN 183
            W Q++
Sbjct: 519  WLQES 523


>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  400 bits (1028), Expect = e-109
 Identities = 187/305 (61%), Positives = 252/305 (82%)
 Frame = -3

Query: 1097 SLYASLISSFAVIREAEMAESLFQEAKKKAMVKDLAVFLKLVVMYVDVGLEEKAVGVVEA 918
            ++Y+SLI SFA IRE ++AE LF+EA++K +++D  VFLKLV+MYV+ GL E+ + +V+A
Sbjct: 233  AVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKA 292

Query: 917  MVEMKIWVTDCILCAIVNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLGL 738
            M  ++I V+DCI CAIVNG+ ++RGL+A+  VY+ LI  GCEPGQVTYAS+I++Y R+ L
Sbjct: 293  MKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMEL 352

Query: 737  PLKAEALFLEMMEKGFNRCLVAYSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYNT 558
              KAE +F EM +KGFN+C+VAYS+M+ MYGK GR  +AM+L+AKMKE GC+PNVWVYN+
Sbjct: 353  YSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNS 412

Query: 557  LLDMHGRLVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECIKYYHEFKMNG 378
            L+DMHGR+ NLRQVEK+WKEMKR+K+  D+ SYTS+I AY+KAG+FE C+++YHEF+MNG
Sbjct: 413  LMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNG 472

Query: 377  GKLDRALCGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQVE 198
            G +DR + GIM  +FSKS R+DEL+KLLQ+MK+EG   DERLY+SALNALRDA L +Q  
Sbjct: 473  GVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQAR 532

Query: 197  WFQKN 183
            W Q++
Sbjct: 533  WLQES 537



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 55/293 (18%), Positives = 126/293 (43%), Gaps = 6/293 (2%)
 Frame = -3

Query: 1058 REAEMAESLFQEAKKKAMVKDLAVFLKLVVMYVDVGLEEKAVGVVEAMVEMKIWVTDCIL 879
            R  E+A   +Q+ K++   +     L+ ++  +   +  +   + E+++E+  +  D  L
Sbjct: 65   RSEELAFDYYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEVFSYNDDVAL 124

Query: 878  CAI---VNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLGLPLKAEALFLE 708
                  + GYN+     +++ VY+ + S G  P   +Y  ++  Y ++    K   LF E
Sbjct: 125  LVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQE 184

Query: 707  MMEKGFNRCLVA---YSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYNTLLDMHGR 537
               +  +    +   Y  +    GK+GRA +A++    M + G   +  VY++L+     
Sbjct: 185  FESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSLICSFAS 244

Query: 536  LVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECIKYYHEFKMNGGKLDRAL 357
            +  ++  E++++E + +KI  D   +  ++  Y + G  E  ++     K    ++   +
Sbjct: 245  IREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKAMKNVEIRVSDCI 304

Query: 356  CGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQVE 198
               +   F+K   +    K+  E+  +G    +  Y S +N      L+ + E
Sbjct: 305  FCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMELYSKAE 357


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
            chloroplastic-like [Vitis vinifera]
          Length = 603

 Score =  400 bits (1028), Expect = e-109
 Identities = 187/305 (61%), Positives = 252/305 (82%)
 Frame = -3

Query: 1097 SLYASLISSFAVIREAEMAESLFQEAKKKAMVKDLAVFLKLVVMYVDVGLEEKAVGVVEA 918
            ++Y+SLI SFA IRE ++AE LF+EA++K +++D  VFLKLV+MYV+ GL E+ + +V+A
Sbjct: 295  AVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIVKA 354

Query: 917  MVEMKIWVTDCILCAIVNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLGL 738
            M  ++I V+DCI CAIVNG+ ++RGL+A+  VY+ LI  GCEPGQVTYAS+I++Y R+ L
Sbjct: 355  MKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVYCRMEL 414

Query: 737  PLKAEALFLEMMEKGFNRCLVAYSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYNT 558
              KAE +F EM +KGFN+C+VAYS+M+ MYGK GR  +AM+L+AKMKE GC+PNVWVYN+
Sbjct: 415  YSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYNS 474

Query: 557  LLDMHGRLVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECIKYYHEFKMNG 378
            L+DMHGR+ NLRQVEK+WKEMKR+K+  D+ SYTS+I AY+KAG+FE C+++YHEF+MNG
Sbjct: 475  LMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEFRMNG 534

Query: 377  GKLDRALCGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQVE 198
            G +DR + GIM  +FSKS R+DEL+KLLQ+MK+EG   DERLY+SALNALRDA L +Q  
Sbjct: 535  GVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRSALNALRDAGLQMQAR 594

Query: 197  WFQKN 183
            W Q++
Sbjct: 595  WLQES 599



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 49/250 (19%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
 Frame = -3

Query: 929 VVEAMVEMKIWVTDCILCAI---VNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMIS 759
           + E+++E+  +  D  L      + GYN+     +++ VY+ + S G  P   +Y  ++ 
Sbjct: 170 ITESLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIME 229

Query: 758 IYWRLGLPLKAEALFLEMMEKGFNRCLVA---YSTMISMYGKLGRASDAMKLLAKMKEIG 588
            Y ++    K   LF E   +  +    +   Y  +    GK+GRA +A++    M + G
Sbjct: 230 AYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKG 289

Query: 587 CKPNVWVYNTLLDMHGRLVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECI 408
              +  VY++L+     +  ++  E++++E + +KI  D   +  ++  Y + G  E  +
Sbjct: 290 ILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTL 349

Query: 407 KYYHEFKMNGGKLDRALCGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNAL 228
           +     K    ++   +   +   F+K   +    K+  E+  +G    +  Y S +N  
Sbjct: 350 EIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTYASIINVY 409

Query: 227 RDAALHLQVE 198
               L+ + E
Sbjct: 410 CRMELYSKAE 419


>ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
            chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  389 bits (999), Expect = e-106
 Identities = 188/304 (61%), Positives = 241/304 (79%)
 Frame = -3

Query: 1100 HSLYASLISSFAVIREAEMAESLFQEAKKKAMVKDLAVFLKLVVMYVDVGLEEKAVGVVE 921
            +++Y++LI +FA I+E ++AE L+ EAK K +++D A+FLKL++MYV  G  EKA+ +VE
Sbjct: 295  YTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVE 354

Query: 920  AMVEMKIWVTDCILCAIVNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLG 741
             M + KI V+DCI CAIVNGY  RRG +A+V VYE LI  GCEPGQVTYAS I+ Y R+G
Sbjct: 355  VMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVG 414

Query: 740  LPLKAEALFLEMMEKGFNRCLVAYSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYN 561
            L  KAE +F EM EKGF++C+VAYS++ISMYGK GR  DAM+LLAKMKE GC+PNVW+YN
Sbjct: 415  LYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYN 474

Query: 560  TLLDMHGRLVNLRQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFEECIKYYHEFKMN 381
             L++MHG+  NL+QVEK+WKEMKR+KI  DK SYTSII AY KA EFE+C +YY EF+MN
Sbjct: 475  ILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMN 534

Query: 380  GGKLDRALCGIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQV 201
            GG +D+A  GIM  VFSK+ R+DEL+KLL++MK EG   DERLY++ALNAL DA L +Q 
Sbjct: 535  GGTIDKAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQVQA 594

Query: 200  EWFQ 189
            +W Q
Sbjct: 595  KWLQ 598



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
 Frame = -3

Query: 875 AIVNGYNRRRGLKASVMVYESLISLGCEPGQVTYASMISIYWRLGLPLKAEALFLEMMEK 696
           A + GYN+    K+++MV++ L S   E     Y  ++  Y +LG   +   LF E+  +
Sbjct: 192 AAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESR 251

Query: 695 GFNRCLVA---YSTMISMYGKLGRASDAMKLLAKMKEIGCKPNVWVYNTLLDMHGRLVNL 525
             +    +   Y  +     K GR  ++++    M++ G   +  +Y+ L+     +  +
Sbjct: 252 ISDSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEV 311

Query: 524 RQVEKIWKEMKRRKIQADKFSYTSIIGAYNKAGEFE---ECIKYYHEFKMNGGKLDRALC 354
           +  E ++ E K +K+  D   +  +I  Y + G  E   E ++   +FK+  G  D   C
Sbjct: 312 KLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKI--GVSDCIFC 369

Query: 353 GIMAAVFSKSERIDELLKLLQEMKSEGVMFDERLYQSALNALRDAALHLQVE 198
            I+   ++     +  +K+ +++  +G    +  Y SA+NA     L+ + E
Sbjct: 370 AIVNG-YATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAE 420


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