BLASTX nr result

ID: Dioscorea21_contig00017952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017952
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001131685.1| hypothetical protein [Zea mays] gi|194692242...   177   6e-43
ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [S...   177   1e-42
ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indi...   173   1e-41
dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica G...   173   1e-41

>ref|NP_001131685.1| hypothetical protein [Zea mays] gi|194692242|gb|ACF80205.1| unknown
           [Zea mays] gi|414879040|tpg|DAA56171.1| TPA:
           hypothetical protein ZEAMMB73_730680 [Zea mays]
          Length = 590

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/131 (67%), Positives = 103/131 (78%)
 Frame = -1

Query: 395 SACTHAGLVDEGVSIFERMIIDFRIAPKVEHYGCVVDXXXXXXXXXXXXXXXETMPMKPT 216
           +ACTHAGLV EG+ IF RM  DF I PKVEHYG +VD               ETMPM+PT
Sbjct: 420 TACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPT 479

Query: 215 PTLWGSLLAACRTHRYVQLAELSVKRLAELGADDAGVYVLMSNIYADEGMWDDVLRIRRL 36
           P LWGSLLAACR+H  V+LAELSV+RLA+LGADD+GVYVL+SNIYADEGMW DVLRIR+L
Sbjct: 480 PELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKL 539

Query: 35  MSEKGMKKESG 3
           MS++GM+K+ G
Sbjct: 540 MSDEGMRKDIG 550


>ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
           gi|241930950|gb|EES04095.1| hypothetical protein
           SORBIDRAFT_03g043630 [Sorghum bicolor]
          Length = 590

 Score =  177 bits (448), Expect = 1e-42
 Identities = 88/131 (67%), Positives = 102/131 (77%)
 Frame = -1

Query: 395 SACTHAGLVDEGVSIFERMIIDFRIAPKVEHYGCVVDXXXXXXXXXXXXXXXETMPMKPT 216
           +ACTHAGLV EG+ IF RM  DF I PKVEHYG +VD               ETMPM+PT
Sbjct: 420 TACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPT 479

Query: 215 PTLWGSLLAACRTHRYVQLAELSVKRLAELGADDAGVYVLMSNIYADEGMWDDVLRIRRL 36
           P LWGSLLAACR+H  V+LAELSV+RLA LGADD+GVYVL+SNIYADEGMW DVLRIR+L
Sbjct: 480 PELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKL 539

Query: 35  MSEKGMKKESG 3
           MS++GM+K+ G
Sbjct: 540 MSDEGMRKDIG 550


>ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Brachypodium distachyon]
          Length = 582

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/131 (67%), Positives = 100/131 (76%)
 Frame = -1

Query: 395 SACTHAGLVDEGVSIFERMIIDFRIAPKVEHYGCVVDXXXXXXXXXXXXXXXETMPMKPT 216
           +ACTHAGL+ EG+ IF RM  DF + PKVEHYG +VD               ETMPM+PT
Sbjct: 412 TACTHAGLISEGLGIFHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPT 471

Query: 215 PTLWGSLLAACRTHRYVQLAELSVKRLAELGADDAGVYVLMSNIYADEGMWDDVLRIRRL 36
           P LWGSLLAACR+HR V+LAELSV+RLA LGADD GVYVL+SNIYADEGMWD V RIRRL
Sbjct: 472 PELWGSLLAACRSHRCVELAELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRL 531

Query: 35  MSEKGMKKESG 3
           MS +GMKK+ G
Sbjct: 532 MSAEGMKKDIG 542


>gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
          Length = 589

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/131 (64%), Positives = 100/131 (76%)
 Frame = -1

Query: 395 SACTHAGLVDEGVSIFERMIIDFRIAPKVEHYGCVVDXXXXXXXXXXXXXXXETMPMKPT 216
           ++CTHAGLV EG+ IF RM  D  + PKVEHYG ++D               ETMPM+PT
Sbjct: 419 TSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPT 478

Query: 215 PTLWGSLLAACRTHRYVQLAELSVKRLAELGADDAGVYVLMSNIYADEGMWDDVLRIRRL 36
           P LWGSLLA+CR+HR V+LAELSV+RLA LGADD+GVYVL+SNIYADEGMWDDV RIR+L
Sbjct: 479 PELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKL 538

Query: 35  MSEKGMKKESG 3
           MS +GMKK  G
Sbjct: 539 MSAEGMKKNIG 549


>dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 483

 Score =  173 bits (439), Expect = 1e-41
 Identities = 85/131 (64%), Positives = 100/131 (76%)
 Frame = -1

Query: 395 SACTHAGLVDEGVSIFERMIIDFRIAPKVEHYGCVVDXXXXXXXXXXXXXXXETMPMKPT 216
           ++CTHAGLV EG+ IF RM  D  + PKVEHYG ++D               ETMPM+PT
Sbjct: 313 TSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPT 372

Query: 215 PTLWGSLLAACRTHRYVQLAELSVKRLAELGADDAGVYVLMSNIYADEGMWDDVLRIRRL 36
           P LWGSLLA+CR+HR V+LAELSV+RLA LGADD+GVYVL+SNIYADEGMWDDV RIR+L
Sbjct: 373 PELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKL 432

Query: 35  MSEKGMKKESG 3
           MS +GMKK  G
Sbjct: 433 MSAEGMKKNIG 443


Top