BLASTX nr result

ID: Dioscorea21_contig00017939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017939
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514130.1| casein kinase, putative [Ricinus communis] g...    87   3e-27
ref|XP_002309212.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-27
ref|XP_002456234.1| hypothetical protein SORBIDRAFT_03g032560 [S...    85   2e-26
gb|EAY75552.1| hypothetical protein OsI_03457 [Oryza sativa Indi...    81   4e-26
pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Pr...    80   7e-26

>ref|XP_002514130.1| casein kinase, putative [Ricinus communis]
           gi|223546586|gb|EEF48084.1| casein kinase, putative
           [Ricinus communis]
          Length = 446

 Score = 86.7 bits (213), Expect(2) = 3e-27
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = -1

Query: 552 QMAGAPSRILGSGIGTSSGMAPAVSNMDRQQGYEEGRTNLSSTDPSRRHIFAPAGNTGSS 373
           Q+A  P+R LG GIGTSSGM PA+ + DRQ G EE R    S D +RR +  P  NTGS 
Sbjct: 269 QLANPPARALGPGIGTSSGMPPAIGSADRQTGGEEARQAGQSMDSARRRLSGPILNTGSF 328

Query: 372 SKQKNPVGGESVVSKEAMLSSLTF 301
           +KQK+PV  +S VSK+ +L S TF
Sbjct: 329 AKQKSPVANDSPVSKDPILPSSTF 352



 Score = 60.5 bits (145), Expect(2) = 3e-27
 Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -2

Query: 182 VMAGNEGEQSRSRATEASPGNFRKFSGPQRSSP-VASAEPRRTSSGRHPSNIKTYESTLK 6
           V  G+E +  R+R T+ASPG   K    QRS P + S++PRR+SS R+ +++KTYES LK
Sbjct: 372 VYLGSEADPQRTRTTDASPGAMHKIPSGQRSPPPLGSSDPRRSSSARNATHMKTYESALK 431

Query: 5   G 3
           G
Sbjct: 432 G 432


>ref|XP_002309212.1| predicted protein [Populus trichocarpa] gi|222855188|gb|EEE92735.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 76.3 bits (186), Expect(2) = 4e-27
 Identities = 41/84 (48%), Positives = 54/84 (64%)
 Frame = -1

Query: 552 QMAGAPSRILGSGIGTSSGMAPAVSNMDRQQGYEEGRTNLSSTDPSRRHIFAPAGNTGSS 373
           Q+A  P+R LG G+GTSSGM P + + DRQ G EE R    + + SRR +     N GSS
Sbjct: 299 QLANPPTRGLGLGVGTSSGMPPPIVSADRQTGGEEVRAAGQTMESSRRRLSGQIINAGSS 358

Query: 372 SKQKNPVGGESVVSKEAMLSSLTF 301
           SKQK+ V  ES ++K+AML + TF
Sbjct: 359 SKQKSLVANESPITKDAMLPNSTF 382



 Score = 70.5 bits (171), Expect(2) = 4e-27
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = -2

Query: 182 VMAGNEGEQSRSRATEASPGNFRKFSGPQRSSPVASAEPRRTSSGRHPSNIKTYESTLKG 3
           V  G+E +  RS  TEASPG   K S  QRS P+ S++PRRTSS R+ S++KTYE+TLKG
Sbjct: 402 VFVGSESDPQRSCTTEASPGAIHKISSGQRSPPLGSSDPRRTSSSRNTSHMKTYETTLKG 461


>ref|XP_002456234.1| hypothetical protein SORBIDRAFT_03g032560 [Sorghum bicolor]
           gi|241928209|gb|EES01354.1| hypothetical protein
           SORBIDRAFT_03g032560 [Sorghum bicolor]
          Length = 470

 Score = 84.7 bits (208), Expect(2) = 2e-26
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = -2

Query: 182 VMAGNEGEQSRSRATEASPGNFRKFSGPQRSSPVASAEPRRTSSGRHPSNIKTYESTLKG 3
           V+A +  E SR+R T+ASPG FR+ SGPQRSSPV SAE +R+SSGRHPSN+K Y+S LKG
Sbjct: 397 VVATDSSEPSRARTTDASPGAFRRASGPQRSSPVHSAEQKRSSSGRHPSNVKNYDSALKG 456



 Score = 59.3 bits (142), Expect(2) = 2e-26
 Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -1

Query: 552 QMAGAPSRILGSGIGTSSGMAPAVSNMDRQQGYEEGRTN-LSSTDPSRRHIFAPAGNTGS 376
           Q+A AP R+ G G G S G+APA+ N DRQ G EE RT+  SS D  RR    P  + G+
Sbjct: 299 QIATAPPRV-GHGAGPS-GLAPALQN-DRQSGPEEARTSGWSSMD--RRRAPLPITSVGT 353

Query: 375 SSKQKNPVGGESVVSKEAMLSSLTF 301
            SKQK PVG ++ VS++A++S   F
Sbjct: 354 LSKQKAPVGNDATVSRDAVISGPNF 378


>gb|EAY75552.1| hypothetical protein OsI_03457 [Oryza sativa Indica Group]
          Length = 472

 Score = 81.3 bits (199), Expect(2) = 4e-26
 Identities = 39/60 (65%), Positives = 47/60 (78%)
 Frame = -2

Query: 182 VMAGNEGEQSRSRATEASPGNFRKFSGPQRSSPVASAEPRRTSSGRHPSNIKTYESTLKG 3
           VM  +  E SR+RAT+ASPG FR+ SGPQ+SSPV SAEP+ +SS RH SN+K YES LKG
Sbjct: 399 VMPTDTSEPSRTRATDASPGAFRRTSGPQKSSPVNSAEPKHSSSARHSSNVKNYESALKG 458



 Score = 62.0 bits (149), Expect(2) = 4e-26
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = -1

Query: 552 QMAGAPSRILGSGIGTSSGMAPAVSNMDRQQGYEEGRTN-LSSTDPSRRHIFAPAGNTGS 376
           Q+A AP R +G G G S G+AP     DRQ G +EGRT+  SS D  RR    P  + G+
Sbjct: 299 QIASAPPRAVGHGAGPS-GLAPPALQNDRQSGVDEGRTSGWSSMD--RRRAPPPIASVGT 355

Query: 375 SSKQKNPVGGESVVSKEAMLSSLTF 301
            +KQK PVG ++  SKE ++S+  F
Sbjct: 356 LAKQKAPVGNDASFSKEPVISASNF 380


>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
          Length = 483

 Score = 80.5 bits (197), Expect(2) = 7e-26
 Identities = 39/60 (65%), Positives = 47/60 (78%)
 Frame = -2

Query: 182 VMAGNEGEQSRSRATEASPGNFRKFSGPQRSSPVASAEPRRTSSGRHPSNIKTYESTLKG 3
           VM  +  E SR+RAT+ASPG FR+ SGPQ+SSPV SAEP+ +SS RH SN+K YES LKG
Sbjct: 399 VMPIDTSEPSRTRATDASPGAFRRTSGPQKSSPVNSAEPKHSSSARHSSNVKNYESALKG 458



 Score = 62.0 bits (149), Expect(2) = 7e-26
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = -1

Query: 552 QMAGAPSRILGSGIGTSSGMAPAVSNMDRQQGYEEGRTN-LSSTDPSRRHIFAPAGNTGS 376
           Q+A AP R +G G G S G+AP     DRQ G +EGRT+  SS D  RR    P  + G+
Sbjct: 299 QIASAPPRAVGHGAGPS-GLAPPALQNDRQSGVDEGRTSGWSSMD--RRRAPPPIASVGT 355

Query: 375 SSKQKNPVGGESVVSKEAMLSSLTF 301
            +KQK PVG ++  SKE ++S+  F
Sbjct: 356 LAKQKAPVGNDASFSKEPVISASNF 380


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