BLASTX nr result

ID: Dioscorea21_contig00017935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017935
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273082.1| PREDICTED: sorting and assembly machinery co...   237   2e-60
emb|CBI25445.3| unnamed protein product [Vitis vinifera]              237   2e-60
gb|EAY98386.1| hypothetical protein OsI_20297 [Oryza sativa Indi...   235   9e-60
ref|NP_001055810.1| Os05g0470800 [Oryza sativa Japonica Group] g...   235   9e-60
gb|AFW82290.1| hypothetical protein ZEAMMB73_445836 [Zea mays]        233   3e-59

>ref|XP_002273082.1| PREDICTED: sorting and assembly machinery component 50 homolog
           B-like [Vitis vinifera]
          Length = 534

 Score =  237 bits (604), Expect = 2e-60
 Identities = 114/162 (70%), Positives = 134/162 (82%)
 Frame = -3

Query: 756 SPLPDRFFMGGHSSPVCTLAGPTSLLGFKFRGLGPTDSRRHIPSRTGSGSEDSTASPGRD 577
           S LP+RFF+GG+SSPVCTL GPT+LLGFK RGLGPT+ RR I  R  S  E+S  S GRD
Sbjct: 375 SSLPERFFLGGNSSPVCTLGGPTTLLGFKSRGLGPTERRRLI--RDKSNGENSETS-GRD 431

Query: 576 VLGGDIAVTAFADVSFDLPLKLFREAGIHGHAFVCVGNLAKLLPQELKSFSLHKFRETVR 397
           V+GGD+AVTAFAD+SFDLPLKLFR+AGIHGH F C GNL KL   E + FS  KF ++ R
Sbjct: 432 VIGGDLAVTAFADLSFDLPLKLFRDAGIHGHVFACAGNLTKLTENEFRKFSFQKFLDSFR 491

Query: 396 SSAGFGLIIPTKLFRMEINYCYILKQFEHDQGKTGIQFNFSS 271
           SSAGFG+I+PTKLFRME+NYCYILKQFEHD G+TG+QF+FS+
Sbjct: 492 SSAGFGIIVPTKLFRMEVNYCYILKQFEHDHGRTGVQFSFSA 533


>emb|CBI25445.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  237 bits (604), Expect = 2e-60
 Identities = 114/162 (70%), Positives = 134/162 (82%)
 Frame = -3

Query: 756 SPLPDRFFMGGHSSPVCTLAGPTSLLGFKFRGLGPTDSRRHIPSRTGSGSEDSTASPGRD 577
           S LP+RFF+GG+SSPVCTL GPT+LLGFK RGLGPT+ RR I  R  S  E+S  S GRD
Sbjct: 305 SSLPERFFLGGNSSPVCTLGGPTTLLGFKSRGLGPTERRRLI--RDKSNGENSETS-GRD 361

Query: 576 VLGGDIAVTAFADVSFDLPLKLFREAGIHGHAFVCVGNLAKLLPQELKSFSLHKFRETVR 397
           V+GGD+AVTAFAD+SFDLPLKLFR+AGIHGH F C GNL KL   E + FS  KF ++ R
Sbjct: 362 VIGGDLAVTAFADLSFDLPLKLFRDAGIHGHVFACAGNLTKLTENEFRKFSFQKFLDSFR 421

Query: 396 SSAGFGLIIPTKLFRMEINYCYILKQFEHDQGKTGIQFNFSS 271
           SSAGFG+I+PTKLFRME+NYCYILKQFEHD G+TG+QF+FS+
Sbjct: 422 SSAGFGIIVPTKLFRMEVNYCYILKQFEHDHGRTGVQFSFSA 463


>gb|EAY98386.1| hypothetical protein OsI_20297 [Oryza sativa Indica Group]
          Length = 520

 Score =  235 bits (599), Expect = 9e-60
 Identities = 113/166 (68%), Positives = 137/166 (82%)
 Frame = -3

Query: 765 NNCSPLPDRFFMGGHSSPVCTLAGPTSLLGFKFRGLGPTDSRRHIPSRTGSGSEDSTASP 586
           N  S +PDRF++GGHSSPVC+L+G +SLLGF+ RG+GPT+ RR +PS +  GS    ASP
Sbjct: 357 NLSSSVPDRFYLGGHSSPVCSLSGLSSLLGFRTRGIGPTEPRRLVPSESEDGS---AASP 413

Query: 585 GRDVLGGDIAVTAFADVSFDLPLKLFREAGIHGHAFVCVGNLAKLLPQELKSFSLHKFRE 406
           GRD LGGD+AV+AFAD+SFDLPLK+FR+AGIHGHAF+  GNLAKL   E K FSL +F  
Sbjct: 414 GRDYLGGDLAVSAFADLSFDLPLKIFRDAGIHGHAFLTAGNLAKLSEGEYKKFSLSEFGR 473

Query: 405 TVRSSAGFGLIIPTKLFRMEINYCYILKQFEHDQGKTGIQFNFSSP 268
           T RSSAG G+I+PTKLFR+E+NYCYILKQ EHD G+TGIQF+FSSP
Sbjct: 474 TFRSSAGVGIILPTKLFRVEVNYCYILKQAEHDSGRTGIQFSFSSP 519


>ref|NP_001055810.1| Os05g0470800 [Oryza sativa Japonica Group]
           gi|51038147|gb|AAT93950.1| unknown protein [Oryza sativa
           Japonica Group] gi|51038207|gb|AAT94010.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113579361|dbj|BAF17724.1| Os05g0470800 [Oryza sativa
           Japonica Group] gi|222631920|gb|EEE64052.1| hypothetical
           protein OsJ_18881 [Oryza sativa Japonica Group]
          Length = 520

 Score =  235 bits (599), Expect = 9e-60
 Identities = 113/166 (68%), Positives = 137/166 (82%)
 Frame = -3

Query: 765 NNCSPLPDRFFMGGHSSPVCTLAGPTSLLGFKFRGLGPTDSRRHIPSRTGSGSEDSTASP 586
           N  S +PDRF++GGHSSPVC+L+G +SLLGF+ RG+GPT+ RR +PS +  GS    ASP
Sbjct: 357 NLSSSVPDRFYLGGHSSPVCSLSGLSSLLGFRTRGIGPTEPRRLVPSESEDGS---AASP 413

Query: 585 GRDVLGGDIAVTAFADVSFDLPLKLFREAGIHGHAFVCVGNLAKLLPQELKSFSLHKFRE 406
           GRD LGGD+AV+AFAD+SFDLPLK+FR+AGIHGHAF+  GNLAKL   E K FSL +F  
Sbjct: 414 GRDYLGGDLAVSAFADLSFDLPLKIFRDAGIHGHAFLTAGNLAKLSEGEYKKFSLSEFGR 473

Query: 405 TVRSSAGFGLIIPTKLFRMEINYCYILKQFEHDQGKTGIQFNFSSP 268
           T RSSAG G+I+PTKLFR+E+NYCYILKQ EHD G+TGIQF+FSSP
Sbjct: 474 TFRSSAGVGIILPTKLFRVEVNYCYILKQAEHDSGRTGIQFSFSSP 519


>gb|AFW82290.1| hypothetical protein ZEAMMB73_445836 [Zea mays]
          Length = 527

 Score =  233 bits (595), Expect = 3e-59
 Identities = 110/166 (66%), Positives = 139/166 (83%)
 Frame = -3

Query: 765 NNCSPLPDRFFMGGHSSPVCTLAGPTSLLGFKFRGLGPTDSRRHIPSRTGSGSEDSTASP 586
           N+ S +P+RF++GG+SSPVC+L GP+SLLGF+ RG+GPT++RRH+ + + SGS D    P
Sbjct: 365 NSTSSVPERFYLGGNSSPVCSLGGPSSLLGFRLRGVGPTEARRHVLNNSESGSAD----P 420

Query: 585 GRDVLGGDIAVTAFADVSFDLPLKLFREAGIHGHAFVCVGNLAKLLPQELKSFSLHKFRE 406
           GRD LGGD+AV+AFAD+SFDLPLK+FR+AGIHGHAF+  GNLAKL   E K+FS  +FR+
Sbjct: 421 GRDYLGGDLAVSAFADLSFDLPLKIFRDAGIHGHAFLTAGNLAKLSEGEYKNFSASEFRQ 480

Query: 405 TVRSSAGFGLIIPTKLFRMEINYCYILKQFEHDQGKTGIQFNFSSP 268
           T RSSAG G+I+PTKLFR+E+NYC ILKQ EHD  KTGIQF+FSSP
Sbjct: 481 TFRSSAGVGIILPTKLFRVEVNYCRILKQAEHDSAKTGIQFSFSSP 526


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