BLASTX nr result

ID: Dioscorea21_contig00017902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017902
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513087.1| U3 small nucleolar ribonucleoprotein protein...   129   2e-28
ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprot...   129   2e-28
ref|XP_002886385.1| hypothetical protein ARALYDRAFT_893060 [Arab...   127   1e-27
ref|XP_002297757.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002304782.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27

>ref|XP_002513087.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
           [Ricinus communis] gi|223548098|gb|EEF49590.1| U3 small
           nucleolar ribonucleoprotein protein imp4, putative
           [Ricinus communis]
          Length = 293

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/72 (83%), Positives = 69/72 (95%)
 Frame = +2

Query: 2   IDDEYADTTVRDPKILLTTSRNPSAPLVQFVKELKFVFPNSTRINRGGQVISEIIETCRS 181
           IDDEYA+ T +DPKILLTTSRNPSAPL+QFVKELKFVFPN+ RINRGGQVISEIIE+CR+
Sbjct: 71  IDDEYANATEKDPKILLTTSRNPSAPLIQFVKELKFVFPNAERINRGGQVISEIIESCRA 130

Query: 182 HEFTEVILVHEH 217
           H++T+VILVHEH
Sbjct: 131 HDYTDVILVHEH 142


>ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis
           vinifera] gi|147790699|emb|CAN61017.1| hypothetical
           protein VITISV_041221 [Vitis vinifera]
           gi|296081284|emb|CBI17728.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/72 (83%), Positives = 68/72 (94%)
 Frame = +2

Query: 2   IDDEYADTTVRDPKILLTTSRNPSAPLVQFVKELKFVFPNSTRINRGGQVISEIIETCRS 181
           IDDEYA+ T +DPKILLTTSRNPSAPL QFVKELKFVFPN+ R+NRGGQVISEIIETCR+
Sbjct: 71  IDDEYANATEKDPKILLTTSRNPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRA 130

Query: 182 HEFTEVILVHEH 217
           H+FT+V+LVHEH
Sbjct: 131 HDFTDVVLVHEH 142


>ref|XP_002886385.1| hypothetical protein ARALYDRAFT_893060 [Arabidopsis lyrata subsp.
           lyrata] gi|297332226|gb|EFH62644.1| hypothetical protein
           ARALYDRAFT_893060 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +2

Query: 2   IDDEYADTTVRDPKILLTTSRNPSAPLVQFVKELKFVFPNSTRINRGGQVISEIIETCRS 181
           IDDEYA+ T  DPKILLTTSRNPSAPL++F KELKFVFPNS RINRGGQVISEIIET RS
Sbjct: 71  IDDEYANATEADPKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGGQVISEIIETARS 130

Query: 182 HEFTEVILVHEH 217
           H+FT+VILVHEH
Sbjct: 131 HDFTDVILVHEH 142


>ref|XP_002297757.1| predicted protein [Populus trichocarpa] gi|222845015|gb|EEE82562.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = +2

Query: 2   IDDEYADTTVRDPKILLTTSRNPSAPLVQFVKELKFVFPNSTRINRGGQVISEIIETCRS 181
           IDDEYA  T RDPKILLTTSR+PSAPL QFVKELKFVFPN+ RINRGGQVISEIIE+CR+
Sbjct: 71  IDDEYAKATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRA 130

Query: 182 HEFTEVILVHEH 217
           H++T+VILVHEH
Sbjct: 131 HDYTDVILVHEH 142


>ref|XP_002304782.1| predicted protein [Populus trichocarpa] gi|222842214|gb|EEE79761.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = +2

Query: 2   IDDEYADTTVRDPKILLTTSRNPSAPLVQFVKELKFVFPNSTRINRGGQVISEIIETCRS 181
           IDDEYA  T RDPKILLTTSR+PSAPL QFVKELKFVFPN+ RINRGGQVISEIIE+CR+
Sbjct: 71  IDDEYAKATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAERINRGGQVISEIIESCRA 130

Query: 182 HEFTEVILVHEH 217
           H++T+VILVHEH
Sbjct: 131 HDYTDVILVHEH 142


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