BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017880
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   141   2e-70
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   142   1e-66
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   139   2e-64
gb|EEC82118.1| hypothetical protein OsI_26143 [Oryza sativa Indi...   136   5e-64
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   140   9e-64

>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1269

 Score =  141 bits (356), Expect(5) = 2e-70
 Identities = 67/80 (83%), Positives = 73/80 (91%)
 Frame = -2

Query: 242 QWEDRQLLRYGAIRGTEVQMKFEVEDERSVILLVHDTKPPFLDGRAVYTKQVEPVMPIKD 63
           QWEDRQLLR GA+RGTEVQ +F+ EDER VILLVHDTKPPFLDGR V+TKQ EP+MPIKD
Sbjct: 412 QWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVFTKQAEPIMPIKD 471

Query: 62  PTSDMAIISRKGSTLVRDIH 3
           PTSDMAIISRKGS LVR+IH
Sbjct: 472 PTSDMAIISRKGSALVREIH 491



 Score = 91.7 bits (226), Expect(5) = 2e-70
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = -1

Query: 411 EEISTMFDADSSSIFLGDDASYQKKEAELAKKLTRRDGSLMALAQSKKLSQLTADNS 241
           EE STMFDADSSS +LGD+AS+QKKEAELAK+L RRDGS M LAQSK+LSQLTADN+
Sbjct: 355 EEGSTMFDADSSSFYLGDEASFQKKEAELAKRLVRRDGSRMTLAQSKRLSQLTADNA 411



 Score = 51.6 bits (122), Expect(5) = 2e-70
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = -2

Query: 650 PGHNQMHASPWDQIALYPVPLRASGSSRKASESISGRRMHQPTSSSVT 507
           P      ASPWD IA  PVP+RASGSS K+S S  G R HQ T SS +
Sbjct: 266 PSSTGSAASPWDHIAPSPVPIRASGSSAKSSGSRHGERSHQLTFSSTS 313



 Score = 40.4 bits (93), Expect(5) = 2e-70
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = -3

Query: 484 EQTYNVTDEMRQEMDYNADRAWYDR 410
           E  + +T+ MR EM+YN+DRAWYDR
Sbjct: 330 EHHHEITENMRLEMEYNSDRAWYDR 354



 Score = 29.3 bits (64), Expect(5) = 2e-70
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -1

Query: 705 DSHSISYKLNHFSPSPMLAGA*PDA 631
           DS S S + N  SPSPM  GA PDA
Sbjct: 230 DSRSNSSRHNQPSPSPMFVGASPDA 254


>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355486522|gb|AES67725.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1269

 Score =  142 bits (358), Expect(5) = 1e-66
 Identities = 67/80 (83%), Positives = 73/80 (91%)
 Frame = -2

Query: 242 QWEDRQLLRYGAIRGTEVQMKFEVEDERSVILLVHDTKPPFLDGRAVYTKQVEPVMPIKD 63
           QWEDRQLLR GA+RGTEVQ +F+ EDER VILLVHDTKPPFLDGR VYTKQ EP+MPIKD
Sbjct: 412 QWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVYTKQAEPIMPIKD 471

Query: 62  PTSDMAIISRKGSTLVRDIH 3
           PTSDMA+ISRKGS LVR+IH
Sbjct: 472 PTSDMALISRKGSALVREIH 491



 Score = 88.6 bits (218), Expect(5) = 1e-66
 Identities = 43/57 (75%), Positives = 53/57 (92%)
 Frame = -1

Query: 411 EEISTMFDADSSSIFLGDDASYQKKEAELAKKLTRRDGSLMALAQSKKLSQLTADNS 241
           EE S +FD+DSSS+FLGD+AS+QKKEAELAK+L RRDG+ M+L+QSKKLSQLTADN+
Sbjct: 355 EEGSALFDSDSSSLFLGDEASFQKKEAELAKRLVRRDGTKMSLSQSKKLSQLTADNA 411



 Score = 44.7 bits (104), Expect(5) = 1e-66
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -3

Query: 484 EQTYNVTDEMRQEMDYNADRAWYDR 410
           E  Y +T+ MRQEM+Y+ADRAWYDR
Sbjct: 330 EHKYEITESMRQEMEYDADRAWYDR 354



 Score = 42.4 bits (98), Expect(5) = 1e-66
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = -2

Query: 626 SPWDQIALYPVPLRASGSSRKASESISGRRMHQPTSSS 513
           SPWD ++  PVP+RASGSS K+S S   RR H+   SS
Sbjct: 274 SPWDHVSPSPVPIRASGSSVKSSVSGYNRRSHKLAFSS 311



 Score = 23.9 bits (50), Expect(5) = 1e-66
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 669 SPSPMLAGA*PDA 631
           SPSPM  GA PDA
Sbjct: 245 SPSPMFVGASPDA 257


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Glycine max]
          Length = 1270

 Score =  139 bits (350), Expect(5) = 2e-64
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = -2

Query: 242 QWEDRQLLRYGAIRGTEVQMKFEVEDERSVILLVHDTKPPFLDGRAVYTKQVEPVMPIKD 63
           QWEDRQLLR GA+RGTEVQ +F+ E+E  VILLVHDTKPPFLDGR V+TKQ EP+MP+KD
Sbjct: 413 QWEDRQLLRSGAVRGTEVQTEFDDEEEHKVILLVHDTKPPFLDGRVVFTKQAEPIMPLKD 472

Query: 62  PTSDMAIISRKGSTLVRDIH 3
           PTSDMAIISRKGSTLVR+IH
Sbjct: 473 PTSDMAIISRKGSTLVREIH 492



 Score = 84.7 bits (208), Expect(5) = 2e-64
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -1

Query: 411 EEISTMFDADSSSIFLGDDASYQKKEAELAKKLTRRDGSLMALAQSKKLSQLTADNS 241
           EE ST FD D+SS+FLGD+AS+QKKEAELAK+L RRDG+ M+LAQSKKLSQLTADN+
Sbjct: 357 EEGST-FDGDNSSLFLGDEASFQKKEAELAKRLVRRDGTKMSLAQSKKLSQLTADNA 412



 Score = 44.7 bits (104), Expect(5) = 2e-64
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -2

Query: 629 ASPWDQIALYPVPLRASGSSRKASESISGRRMHQPTSSSVT 507
           +SPWD ++  PVP+RASGSS K+S S    R HQ + SS T
Sbjct: 275 SSPWDHVSPSPVPIRASGSSTKSSVSKHNGRSHQLSFSSET 315



 Score = 42.0 bits (97), Expect(5) = 2e-64
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = -3

Query: 484 EQTYNVTDEMRQEMDYNADRAWYDR 410
           E  Y +T+ MR EM+Y+ADRAWYDR
Sbjct: 332 EHKYEITESMRLEMEYDADRAWYDR 356



 Score = 23.9 bits (50), Expect(5) = 2e-64
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 669 SPSPMLAGA*PDA 631
           SPSPM  GA PDA
Sbjct: 244 SPSPMFVGASPDA 256


>gb|EEC82118.1| hypothetical protein OsI_26143 [Oryza sativa Indica Group]
          Length = 1287

 Score =  136 bits (343), Expect(5) = 5e-64
 Identities = 64/79 (81%), Positives = 72/79 (91%)
 Frame = -2

Query: 242 QWEDRQLLRYGAIRGTEVQMKFEVEDERSVILLVHDTKPPFLDGRAVYTKQVEPVMPIKD 63
           QWEDRQLLR GA+RGTEVQ +F+ EDER VILLVHDTKPPFLDGR V+TKQ EPVMP+KD
Sbjct: 430 QWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKD 489

Query: 62  PTSDMAIISRKGSTLVRDI 6
           PTSDMAI++RKGS LVR+I
Sbjct: 490 PTSDMAIVARKGSALVREI 508



 Score = 79.0 bits (193), Expect(5) = 5e-64
 Identities = 39/57 (68%), Positives = 51/57 (89%)
 Frame = -1

Query: 411 EEISTMFDADSSSIFLGDDASYQKKEAELAKKLTRRDGSLMALAQSKKLSQLTADNS 241
           EE +TMFD D+S ++L DD+SY+K+EA+L K+LTR+DGSLM LAQSKKLSQ+TADN+
Sbjct: 374 EEHNTMFDGDNS-MYLEDDSSYKKREAQLPKRLTRKDGSLMTLAQSKKLSQMTADNA 429



 Score = 45.8 bits (107), Expect(5) = 5e-64
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -2

Query: 629 ASPWDQIALYPVPLRASGSSRKASESISGRRMHQPTSSSVT 507
           ASPWD ++  P P+RASGSS+ +S   SG R HQ T SS +
Sbjct: 294 ASPWDNVSPSPAPIRASGSSKGSSYPRSGGRSHQLTFSSTS 334



 Score = 44.3 bits (103), Expect(5) = 5e-64
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = -3

Query: 493 NALEQTYNVTDEMRQEMDYNADRAWYD 413
           +A +  Y +++EM QEMDYNADRAWYD
Sbjct: 346 SAADGNYEISEEMMQEMDYNADRAWYD 372



 Score = 27.3 bits (59), Expect(5) = 5e-64
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -1

Query: 705 DSHSISYKLNHFSPSPMLAGA*PDA 631
           D  S S++  H SPSPMLA A PDA
Sbjct: 255 DDRSNSHR-QHPSPSPMLAAASPDA 278


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cucumis sativus]
          Length = 1298

 Score =  140 bits (353), Expect(5) = 9e-64
 Identities = 66/80 (82%), Positives = 74/80 (92%)
 Frame = -2

Query: 242 QWEDRQLLRYGAIRGTEVQMKFEVEDERSVILLVHDTKPPFLDGRAVYTKQVEPVMPIKD 63
           QWEDRQLLR GA+RGTEVQ +F+ E+ER VILLVHDTKPPFLDGR V+TKQ EP+MPIKD
Sbjct: 441 QWEDRQLLRSGAVRGTEVQTEFDDEEERKVILLVHDTKPPFLDGRVVFTKQAEPIMPIKD 500

Query: 62  PTSDMAIISRKGSTLVRDIH 3
           PTSDMAIISRKGS+LVR+IH
Sbjct: 501 PTSDMAIISRKGSSLVREIH 520



 Score = 89.4 bits (220), Expect(5) = 9e-64
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = -1

Query: 411 EEISTMFDADSSSIFLGDDASYQKKEAELAKKLTRRDGSLMALAQSKKLSQLTADNS 241
           +E +TMFDADSSS F GDDA++QKKEAELAK+L RRDG+ M LAQSKKLSQLTADN+
Sbjct: 384 DEGNTMFDADSSSFFFGDDAAFQKKEAELAKRLVRRDGTKMTLAQSKKLSQLTADNA 440



 Score = 40.4 bits (93), Expect(5) = 9e-64
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 650 PGHNQMHASPWDQIALYPVPLRASGSS-RKASESISGRRMHQPTSS 516
           P      ASPWDQI+  PVP+RASGSS R +S S   +  H   SS
Sbjct: 292 PNSTGSSASPWDQISPSPVPVRASGSSVRSSSTSYLSKTHHLKFSS 337



 Score = 37.7 bits (86), Expect(5) = 9e-64
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = -3

Query: 475 YNVTDEMRQEMDYNADRAWYDR 410
           + +++ MR EM+YN+DRAWYDR
Sbjct: 362 HEISENMRLEMEYNSDRAWYDR 383



 Score = 24.3 bits (51), Expect(5) = 9e-64
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 705 DSHSISYKLNHFSPSPMLAGA*PDA 631
           D  S S +    SPSPM  GA PDA
Sbjct: 256 DGRSNSSRHYQPSPSPMYVGASPDA 280