BLASTX nr result
ID: Dioscorea21_contig00017869
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00017869
(1211 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi... 371 e-100
emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera] 371 e-100
ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|2... 367 2e-99
ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group] g... 362 1e-97
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,... 356 6e-96
>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
protein product [Vitis vinifera]
Length = 513
Score = 371 bits (952), Expect = e-100
Identities = 178/313 (56%), Positives = 237/313 (75%)
Frame = +3
Query: 3 FNALLRALCSQKRMAEAKTVFHKMHARCSANVRTMNILLLGFKDSGNVLAMELFYHEMVV 182
FN LLRA C+Q++M EA++VFHKMH+R S N +TMNILLLGFK+SG+V A+ELFYHEM+
Sbjct: 189 FNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIR 248
Query: 183 RGFEPNVASYNIRMDAYCKKGRFSDAMEVLEEMEMKHCVPTVETFTTLIHGAGVVRNSVR 362
RGF+PN +YNIR+DAYCKKG F D + +LEEME +C PT+ET TTLIHGAGV +N R
Sbjct: 249 RGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISR 308
Query: 363 AHELLDEMRRRGLSPDVAVYNALLSSFLRCRDLNSAMQLMCEMEEKGIGLDDVSYYTMFC 542
A EL +E+ R L PD+ VYNA +SS +R R++ SA+ LM EMEE+GIG D ++Y+TMF
Sbjct: 309 ARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFR 368
Query: 543 ALKRFGEIDKVYNLYGKMVDRNFVPKMRTVVMLMKCFCEDRRPEMGLELWEYMVDNGFCP 722
L R I+ V LY KM+ RNFVPK RT+VMLMK FC++++ ++ L+LW Y++D G+CP
Sbjct: 369 GLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCP 428
Query: 723 HGHALDLLVTSMCCKGRVEDAYKCFKQLTERGRCPPERSFQVLEGFLVRRKDTEKLEELC 902
HGHALDLLVT +C G+V++A +C KQ ERGR E F++LE +LV + E L +L
Sbjct: 429 HGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLD 488
Query: 903 KMMKGLQSLVPQS 941
+M+K L +++P S
Sbjct: 489 QMIKKLHTVLPPS 501
>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 371 bits (952), Expect = e-100
Identities = 178/313 (56%), Positives = 237/313 (75%)
Frame = +3
Query: 3 FNALLRALCSQKRMAEAKTVFHKMHARCSANVRTMNILLLGFKDSGNVLAMELFYHEMVV 182
FN LLRA C+Q++M EA++VFHKMH+R S N +TMNILLLGFK+SG+V A+ELFYHEM+
Sbjct: 189 FNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIR 248
Query: 183 RGFEPNVASYNIRMDAYCKKGRFSDAMEVLEEMEMKHCVPTVETFTTLIHGAGVVRNSVR 362
RGF+PN +YNIR+DAYCKKG F D + +LEEME +C PT+ET TTLIHGAGV +N R
Sbjct: 249 RGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISR 308
Query: 363 AHELLDEMRRRGLSPDVAVYNALLSSFLRCRDLNSAMQLMCEMEEKGIGLDDVSYYTMFC 542
A EL +E+ R L PD+ VYNA +SS +R R++ SA+ LM EMEE+GIG D ++Y+TMF
Sbjct: 309 ARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFR 368
Query: 543 ALKRFGEIDKVYNLYGKMVDRNFVPKMRTVVMLMKCFCEDRRPEMGLELWEYMVDNGFCP 722
L R I+ V LY KM+ RNFVPK RT+VMLMK FC++++ ++ L+LW Y++D G+CP
Sbjct: 369 GLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCP 428
Query: 723 HGHALDLLVTSMCCKGRVEDAYKCFKQLTERGRCPPERSFQVLEGFLVRRKDTEKLEELC 902
HGHALDLLVT +C G+V++A +C KQ ERGR E F++LE +LV + E L +L
Sbjct: 429 HGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLD 488
Query: 903 KMMKGLQSLVPQS 941
+M+K L +++P S
Sbjct: 489 QMIKKLHTVLPPS 501
>ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|222834094|gb|EEE72571.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 367 bits (943), Expect = 2e-99
Identities = 179/313 (57%), Positives = 235/313 (75%)
Frame = +3
Query: 3 FNALLRALCSQKRMAEAKTVFHKMHARCSANVRTMNILLLGFKDSGNVLAMELFYHEMVV 182
FN LLRA C+ +++ EAK+VF KMH R NV+TMNILLLGFK+S +V AMELFYHEMV
Sbjct: 187 FNVLLRAFCTVRKLKEAKSVFVKMHERFPPNVKTMNILLLGFKESRDVTAMELFYHEMVK 246
Query: 183 RGFEPNVASYNIRMDAYCKKGRFSDAMEVLEEMEMKHCVPTVETFTTLIHGAGVVRNSVR 362
RGF+P+ +SY IR+DAYCKKG F+DA+ + EEME +C+PT+ET TTLIHGAGV RN+++
Sbjct: 247 RGFKPSSSSYGIRIDAYCKKGYFADALRIFEEMERANCLPTLETVTTLIHGAGVARNAMK 306
Query: 363 AHELLDEMRRRGLSPDVAVYNALLSSFLRCRDLNSAMQLMCEMEEKGIGLDDVSYYTMFC 542
A EL DE+ +R L D YNAL+SS ++CR++ SA+QLM EME+ I DD++Y+TMF
Sbjct: 307 ARELFDEIPKRNLQADTGAYNALISSLVKCREVKSAIQLMDEMEKNNIHYDDMTYHTMFL 366
Query: 543 ALKRFGEIDKVYNLYGKMVDRNFVPKMRTVVMLMKCFCEDRRPEMGLELWEYMVDNGFCP 722
L + G I+ V LY KM+DRNFVPK RTVVMLMK FC + + ++GL LW Y+V G+CP
Sbjct: 367 GLMKSGSIEGVCELYHKMIDRNFVPKTRTVVMLMKFFCVNSQIDLGLNLWGYLVGKGYCP 426
Query: 723 HGHALDLLVTSMCCKGRVEDAYKCFKQLTERGRCPPERSFQVLEGFLVRRKDTEKLEELC 902
H HALDLLVT +C +GR +A+KC KQ ERG E + +LE FL++ T+KL EL
Sbjct: 427 HHHALDLLVTGLCSRGRSHEAFKCSKQSLERGIHVSEAVYGMLERFLLQSNMTDKLGELN 486
Query: 903 KMMKGLQSLVPQS 941
+M++ LQS++P S
Sbjct: 487 QMIEKLQSVLPPS 499
>ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group]
gi|53791827|dbj|BAD53893.1| pentatricopeptide
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|53792848|dbj|BAD53881.1| pentatricopeptide
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113596484|dbj|BAF20358.1| Os06g0694600 [Oryza
sativa Japonica Group]
Length = 484
Score = 362 bits (929), Expect = 1e-97
Identities = 165/307 (53%), Positives = 234/307 (76%), Gaps = 1/307 (0%)
Frame = +3
Query: 6 NALLRALCSQKRMAEAKTVFHKMHARCSANVRTMNILLLGFKDSGNVLAMELFYHEMVVR 185
NALLRA C++ R+AEA+ +FH+ + RT N LLLGFK++GN A++LFYH+ V+R
Sbjct: 167 NALLRAFCARGRVAEARALFHRYCDAYPPDARTFNTLLLGFKEAGNAQALDLFYHDAVLR 226
Query: 186 GFEPNVASYNIRMDAYCKKGRFSDAMEVLEEMEMK-HCVPTVETFTTLIHGAGVVRNSVR 362
GF P+ SY +RMDAYCKKGRF DA+++L+EM + +C PT++ FTTLI+GAG+VRN++R
Sbjct: 227 GFVPDAVSYCVRMDAYCKKGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRNAIR 286
Query: 363 AHELLDEMRRRGLSPDVAVYNALLSSFLRCRDLNSAMQLMCEMEEKGIGLDDVSYYTMFC 542
A +L DEM + G++PD +NAL+ +++R RDL S M +M EME KGIGLDDVSY TM C
Sbjct: 287 ARQLFDEMGQWGVTPDRGAHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLC 346
Query: 543 ALKRFGEIDKVYNLYGKMVDRNFVPKMRTVVMLMKCFCEDRRPEMGLELWEYMVDNGFCP 722
+R G+++ ++ +Y KMV F+P+ RT ++LMK FCE+ RP++GLELW+Y++ G P
Sbjct: 347 GFQRIGDLEGIWKVYSKMVGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVP 406
Query: 723 HGHALDLLVTSMCCKGRVEDAYKCFKQLTERGRCPPERSFQVLEGFLVRRKDTEKLEELC 902
H HALD+LVT +CC+G V +AY+CF+++ E G P ER+F+VLEGFL R+++ EKLEE+
Sbjct: 407 HRHALDVLVTGLCCRGVVLEAYRCFREMIEMGMTPTERAFRVLEGFLKRKREFEKLEEIR 466
Query: 903 KMMKGLQ 923
+MMK Q
Sbjct: 467 QMMKAAQ 473
>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 530
Score = 356 bits (914), Expect = 6e-96
Identities = 171/313 (54%), Positives = 229/313 (73%)
Frame = +3
Query: 3 FNALLRALCSQKRMAEAKTVFHKMHARCSANVRTMNILLLGFKDSGNVLAMELFYHEMVV 182
FN LL+A CSQ+ + EA++VF KMH + + N +TMNILLLGFK + ++ AMELFYHE+V
Sbjct: 206 FNVLLQAFCSQREVKEARSVFQKMHDQFNPNTKTMNILLLGFKKARDITAMELFYHEIVR 265
Query: 183 RGFEPNVASYNIRMDAYCKKGRFSDAMEVLEEMEMKHCVPTVETFTTLIHGAGVVRNSVR 362
RGF+ +YNIR+DAYCKKG F D + + EEME +C PT+ET TTLIHGAGV RN +
Sbjct: 266 RGFKATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNIHK 325
Query: 363 AHELLDEMRRRGLSPDVAVYNALLSSFLRCRDLNSAMQLMCEMEEKGIGLDDVSYYTMFC 542
A L DE+ +R L PD YNAL+SS ++C+D+ SAM+LM EMEEK IG D V+Y+T+F
Sbjct: 326 ARHLFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFF 385
Query: 543 ALKRFGEIDKVYNLYGKMVDRNFVPKMRTVVMLMKCFCEDRRPEMGLELWEYMVDNGFCP 722
L + + + V +LY +M+ R+FVPK RTVVMLMK FC + R ++GL W+YM+D G+CP
Sbjct: 386 GLMKLNDTEGVCDLYHRMISRDFVPKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGYCP 445
Query: 723 HGHALDLLVTSMCCKGRVEDAYKCFKQLTERGRCPPERSFQVLEGFLVRRKDTEKLEELC 902
HGHALDLLVT +C +GR+ +AY+C KQ ERG E +++LE L + T+KL EL
Sbjct: 446 HGHALDLLVTGLCSRGRLLEAYECSKQFVERGMRMSEVVYRMLERSLQQSDFTDKLRELD 505
Query: 903 KMMKGLQSLVPQS 941
+M+K LQS++P S
Sbjct: 506 QMIKKLQSVLPPS 518