BLASTX nr result

ID: Dioscorea21_contig00017851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017851
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569647.1| PREDICTED: RNA polymerase II transcriptional...   166   3e-39
emb|CBI34506.3| unnamed protein product [Vitis vinifera]              166   3e-39
ref|NP_192830.1| RNA polymerase II transcriptional coactivator K...   162   4e-38
dbj|BAB41214.1| putative transcriptional coactivator [Brassica r...   159   3e-37
ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arab...   158   7e-37

>ref|XP_003569647.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Brachypodium distachyon]
          Length = 183

 Score =  166 bits (420), Expect = 3e-39
 Identities = 90/177 (50%), Positives = 111/177 (62%), Gaps = 8/177 (4%)
 Frame = +1

Query: 112 KKISDVVLDILSTADMEKTTEFKVRTAAAERLGIDLSHPDRKRFVRSVVESFLKS----- 276
           KK+   VL+IL  +D E +TE+KVR+AA +RLGIDLS PDRK FVR +V+ +L+S     
Sbjct: 7   KKVEATVLEILRGSDRESSTEYKVRSAATDRLGIDLSLPDRKLFVRRIVDGYLRSLVEED 66

Query: 277 ---KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEKEFDDDGDLIVCRLSNKRRVT 447
              +                                 G KEFDD+GDLI+CRLS  RRVT
Sbjct: 67  EQKQQAGSDEEGDKKPQEEEKEVVEKEEEEDEKEGGAGNKEFDDNGDLILCRLSTHRRVT 126

Query: 448 LQEFRGKTLVSIREFFEKDGKQFPTSKGISLSIDQWEVFRNLVPEIEDAIKKLESGE 618
           LQEFRG TLVSIRE++ KDGK+ PTSKGIS++++QWE FRN VP IEDAIK L   E
Sbjct: 127 LQEFRGMTLVSIREYYLKDGKEMPTSKGISMTVEQWETFRNSVPAIEDAIKNLGESE 183


>emb|CBI34506.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score =  166 bits (420), Expect = 3e-39
 Identities = 87/167 (52%), Positives = 113/167 (67%)
 Frame = +1

Query: 112 KKISDVVLDILSTADMEKTTEFKVRTAAAERLGIDLSHPDRKRFVRSVVESFLKSKXXXX 291
           ++I   VL+IL +ADM++ TEFKVR  A+++LGI+LS PD KRFVR VVE+FL S     
Sbjct: 7   RRIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLHS----- 61

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEKEFDDDGDLIVCRLSNKRRVTLQEFRGKT 471
                                        G KE+DDDGDLI+CRLS++RRVT+Q+FRGKT
Sbjct: 62  -----------------------------GVKEYDDDGDLIICRLSDRRRVTIQDFRGKT 92

Query: 472 LVSIREFFEKDGKQFPTSKGISLSIDQWEVFRNLVPEIEDAIKKLES 612
           LVSIREF+ KDGK+ P+SKGISL+ +QW  F+  VP IE+AI+K+ES
Sbjct: 93  LVSIREFYRKDGKELPSSKGISLTAEQWSAFKKNVPAIEEAIQKMES 139


>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana] gi|145333013|ref|NP_001078372.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
          Length = 165

 Score =  162 bits (411), Expect = 4e-38
 Identities = 85/167 (50%), Positives = 111/167 (66%)
 Frame = +1

Query: 112 KKISDVVLDILSTADMEKTTEFKVRTAAAERLGIDLSHPDRKRFVRSVVESFLKSKXXXX 291
           +KI   V++ILS +DM++ TEFKVR  A+E+L IDLS    K FVRSVVE FL  +    
Sbjct: 7   EKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERARE 66

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEKEFDDDGDLIVCRLSNKRRVTLQEFRGKT 471
                                       +G KEFDDDGDLI+CRLS+KRRVT+QEF+GK+
Sbjct: 67  YENSQVNKEEEDGDKDCG----------KGNKEFDDDGDLIICRLSDKRRVTIQEFKGKS 116

Query: 472 LVSIREFFEKDGKQFPTSKGISLSIDQWEVFRNLVPEIEDAIKKLES 612
           LVSIRE+++KDGK+ PTSKGISL+ +QW  F+  +P IE+A+KK+ES
Sbjct: 117 LVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMES 163


>dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
          Length = 165

 Score =  159 bits (403), Expect = 3e-37
 Identities = 84/166 (50%), Positives = 107/166 (64%)
 Frame = +1

Query: 115 KISDVVLDILSTADMEKTTEFKVRTAAAERLGIDLSHPDRKRFVRSVVESFLKSKXXXXX 294
           KI + V +IL  +DM + TEFKVR  A+ERLGIDLS    K FVR +V+SFL+       
Sbjct: 8   KIEETVREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFLEE------ 61

Query: 295 XXXXXXXXXXXXXXXXXXXXXXXXXXXRGEKEFDDDGDLIVCRLSNKRRVTLQEFRGKTL 474
                                       G KEFDDDGDLI+CRLS+KRRVT+QEFRGK+L
Sbjct: 62  ----VESKQQQQQDKEEEEEEEEERAKEGNKEFDDDGDLIICRLSDKRRVTIQEFRGKSL 117

Query: 475 VSIREFFEKDGKQFPTSKGISLSIDQWEVFRNLVPEIEDAIKKLES 612
           VSIRE+++KDGK+ P+SKGISL+ +QW  F+  +P IE A+KK+ES
Sbjct: 118 VSIREYYKKDGKELPSSKGISLTDEQWSTFKKNIPAIEAAVKKMES 163


>ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
           lyrata] gi|297320491|gb|EFH50913.1| hypothetical protein
           ARALYDRAFT_489930 [Arabidopsis lyrata subsp. lyrata]
          Length = 165

 Score =  158 bits (400), Expect = 7e-37
 Identities = 85/167 (50%), Positives = 109/167 (65%)
 Frame = +1

Query: 112 KKISDVVLDILSTADMEKTTEFKVRTAAAERLGIDLSHPDRKRFVRSVVESFLKSKXXXX 291
           +KI   V +IL+ +DM++ TEFKVR  A+E LGIDLS    K FVRSVVE FL  +    
Sbjct: 7   EKIERTVREILNESDMKEMTEFKVRQLASEGLGIDLSEKSHKAFVRSVVEKFLHEERARD 66

Query: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEKEFDDDGDLIVCRLSNKRRVTLQEFRGKT 471
                                       +G KEFDDDGDLI+ RLS+KRRVT+QEF+GKT
Sbjct: 67  YEKSQVNKEEEDGDKDCG----------KGNKEFDDDGDLIIWRLSDKRRVTIQEFKGKT 116

Query: 472 LVSIREFFEKDGKQFPTSKGISLSIDQWEVFRNLVPEIEDAIKKLES 612
           LVSIRE+++KDGK+ PTSKGISL+ +QW  F+  +P IE+A+KK+ES
Sbjct: 117 LVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNIPAIENAVKKMES 163


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