BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017800
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004402729.1| hypothetical protein VAB18032_05015 [Verruco...    72   5e-11
ref|YP_004301551.1| gp17 [Brochothrix phage BL3] gi|296245485|gb...    62   4e-08
gb|AAC17170.1| DNA-directed RNA polymerase beta' subunit 2 [Stre...    61   1e-07
gb|AEZ49497.1| RNA polymerase beta'' subunit, partial [Streptoch...    61   1e-07
gb|ADC53595.1| RNA polymerase beta'' subunit [Pharus latifolius]       59   5e-07

>ref|YP_004402729.1| hypothetical protein VAB18032_05015 [Verrucosispora maris
           AB-18-032] gi|328807957|gb|AEB42129.1| hypothetical
           protein VAB18032_05015 [Verrucosispora maris AB-18-032]
          Length = 853

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/92 (35%), Positives = 43/92 (46%)
 Frame = -3

Query: 277 KSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNKSAQK 98
           K +Q +W  A  P Q+E   +  P Q NW  S  PAQ DW     PAQ +W   N  AQ 
Sbjct: 200 KPAQPDWAQANPPSQSERAQSNSPAQPNWTQSSPPAQPDWAQGSAPAQPDWAQGNSPAQP 259

Query: 97  EWGLVKESSQDEWGSIKKPAQDEGGSFKKSAQ 2
           +W   K  +Q +W     PAQ +      +AQ
Sbjct: 260 DWAQAK-PAQPDWAQANPPAQPDWAQTSPAAQ 290



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -3

Query: 271 SQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNKSAQKEW 92
           +Q +W     P Q +W     P Q +W  +K PAQ DW  +  PAQ +W   + +AQ EW
Sbjct: 235 AQPDWAQGSAPAQPDWAQGNSPAQPDWAQAK-PAQPDWAQANPPAQPDWAQTSPAAQPEW 293

Query: 91  GLVKESSQDEWGSIKKPAQDEGGSFKKSAQ 2
                S+Q +W    + A     + + +AQ
Sbjct: 294 AQGGPSAQPDWAQTDQAATRGEPAARATAQ 323


>ref|YP_004301551.1| gp17 [Brochothrix phage BL3] gi|296245485|gb|ADH03098.1| gp17
            [Brochothrix phage BL3]
          Length = 1567

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
 Frame = -3

Query: 286  SVPKSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNKS 107
            +V K + D+W   K  +    G+A+K   + W S KK   N W + KK   + W  + KS
Sbjct: 915  TVKKWTSDKWNDIKNSISESAGNASKKASEKWDSIKKNTSNSWDNVKKVTSEKWNDVKKS 974

Query: 106  AQ-----------KEWGLVKESSQDEWGSIKKPAQDEGGSFK 14
                         ++W  +K+ + D W +IKK   +  G+ K
Sbjct: 975  VSNAVIDATKKTAEKWDSIKKKTSDSWSNIKKSTSETWGNVK 1016



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/86 (27%), Positives = 39/86 (45%)
 Frame = -3

Query: 289  GSVPKSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNK 110
            G+  K + ++W S KK   N W +  K   + W   KK   N    + K   + W S+ K
Sbjct: 936  GNASKKASEKWDSIKKNTSNSWDNVKKVTSEKWNDVKKSVSNAVIDATKKTAEKWDSIKK 995

Query: 109  SAQKEWGLVKESSQDEWGSIKKPAQD 32
                 W  +K+S+ + WG++K    D
Sbjct: 996  KTSDSWSNIKKSTSETWGNVKTKVSD 1021



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
 Frame = -3

Query: 271  SQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNKSAQKEW 92
            +++ W + KK   ++W        ++ G++ K A   W S KK   ++W ++ K   ++W
Sbjct: 909  TKETWNTVKKWTSDKWNDIKNSISESAGNASKKASEKWDSIKKNTSNSWDNVKKVTSEKW 968

Query: 91   GLVKES-----------SQDEWGSIKKPAQDEGGSFKKS 8
              VK+S           + ++W SIKK   D   + KKS
Sbjct: 969  NDVKKSVSNAVIDATKKTAEKWDSIKKKTSDSWSNIKKS 1007


>gb|AAC17170.1| DNA-directed RNA polymerase beta' subunit 2 [Streptochaeta
           angustifolia]
          Length = 250

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/93 (26%), Positives = 63/93 (67%)
 Frame = -3

Query: 289 GSVPKSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNK 110
           G + + S++E+G+ ++  ++E+GS  +  +D +GS ++ A++++ S ++ ++D +G+  +
Sbjct: 131 GILEEDSEEEYGNPEEDSEDEYGSPEEDSEDEYGSPEEDAEDEYRSPEEDSEDEYGNPEE 190

Query: 109 SAQKEWGLVKESSQDEWGSIKKPAQDEGGSFKK 11
            +++E+G+++E S++E+GS      +E   FKK
Sbjct: 191 DSEEEYGILEEDSEEEYGS-----TEEDSIFKK 218



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 21/91 (23%), Positives = 61/91 (67%)
 Frame = -3

Query: 277 KSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNKSAQK 98
           + ++ E+G  ++  + E+G+  +  +D +GS ++ +++++GS ++ A+D + S  + ++ 
Sbjct: 124 EETRGEYGILEEDSEEEYGNPEEDSEDEYGSPEEDSEDEYGSPEEDAEDEYRSPEEDSED 183

Query: 97  EWGLVKESSQDEWGSIKKPAQDEGGSFKKSA 5
           E+G  +E S++E+G +++ +++E GS ++ +
Sbjct: 184 EYGNPEEDSEEEYGILEEDSEEEYGSTEEDS 214


>gb|AEZ49497.1| RNA polymerase beta'' subunit, partial [Streptochaeta angustifolia]
          Length = 830

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/93 (26%), Positives = 63/93 (67%)
 Frame = -3

Query: 289 GSVPKSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNK 110
           G + + S++E+G+ ++  ++E+GS  +  +D +GS ++ A++++ S ++ ++D +G+  +
Sbjct: 711 GILEEDSEEEYGNPEEDSEDEYGSPEEDSEDEYGSPEEDAEDEYRSPEEDSEDEYGNPEE 770

Query: 109 SAQKEWGLVKESSQDEWGSIKKPAQDEGGSFKK 11
            +++E+G+++E S++E+GS      +E   FKK
Sbjct: 771 DSEEEYGILEEDSEEEYGS-----TEEDSIFKK 798



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 21/91 (23%), Positives = 61/91 (67%)
 Frame = -3

Query: 277 KSSQDEWGSAKKPVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKPAQDNWGSMNKSAQK 98
           + ++ E+G  ++  + E+G+  +  +D +GS ++ +++++GS ++ A+D + S  + ++ 
Sbjct: 704 EETRGEYGILEEDSEEEYGNPEEDSEDEYGSPEEDSEDEYGSPEEDAEDEYRSPEEDSED 763

Query: 97  EWGLVKESSQDEWGSIKKPAQDEGGSFKKSA 5
           E+G  +E S++E+G +++ +++E GS ++ +
Sbjct: 764 EYGNPEEDSEEEYGILEEDSEEEYGSTEEDS 794


>gb|ADC53595.1| RNA polymerase beta'' subunit [Pharus latifolius]
          Length = 1455

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/106 (23%), Positives = 70/106 (66%), Gaps = 10/106 (9%)
 Frame = -3

Query: 289 GSVPKSSQDEWGSAKK----------PVQNEWGSATKPPQDNWGSSKKPAQNDWGSSKKP 140
           G++ + S+DE+GS +           P+++E+G+     ++ +G  ++ +++++G+ ++ 
Sbjct: 644 GTLEEDSEDEYGSPENEYRTLEEEYGPLEDEYGTL----EEEYGPLEEDSEDEYGTLEED 699

Query: 139 AQDNWGSMNKSAQKEWGLVKESSQDEWGSIKKPAQDEGGSFKKSAQ 2
           ++D +G++ + ++ E+G ++E S+DE+GS ++ ++DE GS ++ ++
Sbjct: 700 SEDEYGTLEEDSEDEYGTLEEDSEDEYGSPEEDSEDEYGSPEEDSE 745