BLASTX nr result

ID: Dioscorea21_contig00017765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017765
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37124.3| unnamed protein product [Vitis vinifera]               90   4e-16
ref|XP_002278050.1| PREDICTED: uncharacterized protein LOC100251...    90   4e-16
ref|NP_563762.1| ENTH/VHS/GAT family protein [Arabidopsis thalia...    78   2e-12
ref|XP_002889591.1| VHS domain-containing protein [Arabidopsis l...    76   7e-12
ref|XP_002307648.1| predicted protein [Populus trichocarpa] gi|2...    75   9e-12

>emb|CBI37124.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 48/117 (41%), Positives = 80/117 (68%)
 Frame = +3

Query: 15  QQKPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDER 194
           Q +P  ++D+LT++++EKCK +QP++QRI+E+T++DE +L EAL LHDELQQV++K +E 
Sbjct: 392 QTEPKPIKDDLTVSMVEKCKQSQPVVQRIVESTINDEGMLFEALYLHDELQQVISKYEEM 451

Query: 195 DFASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEK 365
           +  S   +  NP+ +G   ++P    +E K A+S P+G +     GEA +  +N +K
Sbjct: 452 EAKSTAQLPENPNTAGGNSAEPVE-LNEAKTAES-PKGES-----GEASNEASNDQK 501


>ref|XP_002278050.1| PREDICTED: uncharacterized protein LOC100251552 [Vitis vinifera]
          Length = 359

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 48/117 (41%), Positives = 80/117 (68%)
 Frame = +3

Query: 15  QQKPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDER 194
           Q +P  ++D+LT++++EKCK +QP++QRI+E+T++DE +L EAL LHDELQQV++K +E 
Sbjct: 248 QTEPKPIKDDLTVSMVEKCKQSQPVVQRIVESTINDEGMLFEALYLHDELQQVISKYEEM 307

Query: 195 DFASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEK 365
           +  S   +  NP+ +G   ++P    +E K A+S P+G +     GEA +  +N +K
Sbjct: 308 EAKSTAQLPENPNTAGGNSAEPVE-LNEAKTAES-PKGES-----GEASNEASNDQK 357


>ref|NP_563762.1| ENTH/VHS/GAT family protein [Arabidopsis thaliana]
           gi|8844126|gb|AAF80218.1|AC025290_7 Contains similarity
           to an ADP-ribosylation factor binding protein GGA1 from
           Homo sapiens gb|AF190862 and contains a VHS PF|00790
           domain. EST gb|BE037588 comes from this gene
           [Arabidopsis thaliana] gi|15450711|gb|AAK96627.1|
           At1g06210/F9P14_4 [Arabidopsis thaliana]
           gi|23308355|gb|AAN18147.1| At1g06210/F9P14_4
           [Arabidopsis thaliana] gi|332189839|gb|AEE27960.1|
           ENTH/VHS/GAT family protein [Arabidopsis thaliana]
          Length = 383

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 44/123 (35%), Positives = 73/123 (59%)
 Frame = +3

Query: 21  KPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDERDF 200
           KP   +D+LT++++EKCK +QP++Q IIE+T DDE +L EAL L+DELQQVL+   + D 
Sbjct: 251 KPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLNDELQQVLSSYKKPDE 310

Query: 201 ASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEKKA*ER 380
              +A     + SG+  + P     EE++   +   +   +    +GS+   V++   E+
Sbjct: 311 TEKKASIVEQESSGSKDTGPKPTEQEEQEPVKKTGADDDKKHSEASGSSNKTVKE---EK 367

Query: 381 QAL 389
           QA+
Sbjct: 368 QAV 370


>ref|XP_002889591.1| VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335433|gb|EFH65850.1| VHS domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 42/116 (36%), Positives = 69/116 (59%)
 Frame = +3

Query: 21  KPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDERDF 200
           KP   +D+LT++++EKCK +QP++Q IIE+T DDE +L EAL L+DELQ+VL+   + D 
Sbjct: 251 KPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLNDELQRVLSSYKKPDE 310

Query: 201 ASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEKK 368
              +A     + SG+  + P   T EE++   +  G+    +  EA  ++    K+
Sbjct: 311 TEKKASIVEQESSGSKEAGPKP-TEEEEEQPVKKTGDDDDTKHSEASGSSNKTVKE 365


>ref|XP_002307648.1| predicted protein [Populus trichocarpa] gi|222857097|gb|EEE94644.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 34/63 (53%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   NSVPQQKPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAK 182
           N+  + KP+K  D+LT+++++KCK +QP++QRIIE+T DDE +L EAL+LHDELQQV+ +
Sbjct: 66  NAETEPKPVK--DDLTVSLVDKCKQSQPVIQRIIESTTDDEAMLFEALNLHDELQQVILR 123

Query: 183 CDE 191
            +E
Sbjct: 124 YNE 126


Top