BLASTX nr result
ID: Dioscorea21_contig00017765
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00017765 (689 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37124.3| unnamed protein product [Vitis vinifera] 90 4e-16 ref|XP_002278050.1| PREDICTED: uncharacterized protein LOC100251... 90 4e-16 ref|NP_563762.1| ENTH/VHS/GAT family protein [Arabidopsis thalia... 78 2e-12 ref|XP_002889591.1| VHS domain-containing protein [Arabidopsis l... 76 7e-12 ref|XP_002307648.1| predicted protein [Populus trichocarpa] gi|2... 75 9e-12 >emb|CBI37124.3| unnamed protein product [Vitis vinifera] Length = 503 Score = 90.1 bits (222), Expect = 4e-16 Identities = 48/117 (41%), Positives = 80/117 (68%) Frame = +3 Query: 15 QQKPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDER 194 Q +P ++D+LT++++EKCK +QP++QRI+E+T++DE +L EAL LHDELQQV++K +E Sbjct: 392 QTEPKPIKDDLTVSMVEKCKQSQPVVQRIVESTINDEGMLFEALYLHDELQQVISKYEEM 451 Query: 195 DFASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEK 365 + S + NP+ +G ++P +E K A+S P+G + GEA + +N +K Sbjct: 452 EAKSTAQLPENPNTAGGNSAEPVE-LNEAKTAES-PKGES-----GEASNEASNDQK 501 >ref|XP_002278050.1| PREDICTED: uncharacterized protein LOC100251552 [Vitis vinifera] Length = 359 Score = 90.1 bits (222), Expect = 4e-16 Identities = 48/117 (41%), Positives = 80/117 (68%) Frame = +3 Query: 15 QQKPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDER 194 Q +P ++D+LT++++EKCK +QP++QRI+E+T++DE +L EAL LHDELQQV++K +E Sbjct: 248 QTEPKPIKDDLTVSMVEKCKQSQPVVQRIVESTINDEGMLFEALYLHDELQQVISKYEEM 307 Query: 195 DFASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEK 365 + S + NP+ +G ++P +E K A+S P+G + GEA + +N +K Sbjct: 308 EAKSTAQLPENPNTAGGNSAEPVE-LNEAKTAES-PKGES-----GEASNEASNDQK 357 >ref|NP_563762.1| ENTH/VHS/GAT family protein [Arabidopsis thaliana] gi|8844126|gb|AAF80218.1|AC025290_7 Contains similarity to an ADP-ribosylation factor binding protein GGA1 from Homo sapiens gb|AF190862 and contains a VHS PF|00790 domain. EST gb|BE037588 comes from this gene [Arabidopsis thaliana] gi|15450711|gb|AAK96627.1| At1g06210/F9P14_4 [Arabidopsis thaliana] gi|23308355|gb|AAN18147.1| At1g06210/F9P14_4 [Arabidopsis thaliana] gi|332189839|gb|AEE27960.1| ENTH/VHS/GAT family protein [Arabidopsis thaliana] Length = 383 Score = 77.8 bits (190), Expect = 2e-12 Identities = 44/123 (35%), Positives = 73/123 (59%) Frame = +3 Query: 21 KPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDERDF 200 KP +D+LT++++EKCK +QP++Q IIE+T DDE +L EAL L+DELQQVL+ + D Sbjct: 251 KPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLNDELQQVLSSYKKPDE 310 Query: 201 ASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEKKA*ER 380 +A + SG+ + P EE++ + + + +GS+ V++ E+ Sbjct: 311 TEKKASIVEQESSGSKDTGPKPTEQEEQEPVKKTGADDDKKHSEASGSSNKTVKE---EK 367 Query: 381 QAL 389 QA+ Sbjct: 368 QAV 370 >ref|XP_002889591.1| VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335433|gb|EFH65850.1| VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 383 Score = 75.9 bits (185), Expect = 7e-12 Identities = 42/116 (36%), Positives = 69/116 (59%) Frame = +3 Query: 21 KPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAKCDERDF 200 KP +D+LT++++EKCK +QP++Q IIE+T DDE +L EAL L+DELQ+VL+ + D Sbjct: 251 KPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEGVLFEALHLNDELQRVLSSYKKPDE 310 Query: 201 ASPQAVEHNPDDSGTPCSQPGGCTSEEKDADSQPEGNTAGERVGEAGSTTTNVEKK 368 +A + SG+ + P T EE++ + G+ + EA ++ K+ Sbjct: 311 TEKKASIVEQESSGSKEAGPKP-TEEEEEQPVKKTGDDDDTKHSEASGSSNKTVKE 365 >ref|XP_002307648.1| predicted protein [Populus trichocarpa] gi|222857097|gb|EEE94644.1| predicted protein [Populus trichocarpa] Length = 128 Score = 75.5 bits (184), Expect = 9e-12 Identities = 34/63 (53%), Positives = 52/63 (82%) Frame = +3 Query: 3 NSVPQQKPIKVQDELTLTILEKCKDAQPMLQRIIETTVDDEPLLIEALSLHDELQQVLAK 182 N+ + KP+K D+LT+++++KCK +QP++QRIIE+T DDE +L EAL+LHDELQQV+ + Sbjct: 66 NAETEPKPVK--DDLTVSLVDKCKQSQPVIQRIIESTTDDEAMLFEALNLHDELQQVILR 123 Query: 183 CDE 191 +E Sbjct: 124 YNE 126