BLASTX nr result

ID: Dioscorea21_contig00017754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017754
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55360.1| hypothetical protein OsJ_03403 [Oryza sativa Japo...    78   7e-13
gb|EEC71457.1| hypothetical protein OsI_03683 [Oryza sativa Indi...    78   7e-13
ref|XP_003567102.1| PREDICTED: uncharacterized protein LOC100844...    73   2e-11
ref|XP_002299738.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002458464.1| hypothetical protein SORBIDRAFT_03g034160 [S...    69   4e-10

>gb|EEE55360.1| hypothetical protein OsJ_03403 [Oryza sativa Japonica Group]
          Length = 687

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/65 (58%), Positives = 44/65 (67%)
 Frame = +3

Query: 6   HSSKFPYGWVIGSMGVALFLIAVVFLSCIAFKTLHCCGQQRTNRTKDPDQPTSHKFHILK 185
           HS+KFPYGWVIGSMGVAL LIA+  L+ +  K      Q   N+ K PDQ  SHKF +LK
Sbjct: 255 HSTKFPYGWVIGSMGVALALIAIALLALVLCKLSQYNPQAPNNQGKSPDQSISHKFQLLK 314

Query: 186 STSFC 200
           S SFC
Sbjct: 315 SGSFC 319


>gb|EEC71457.1| hypothetical protein OsI_03683 [Oryza sativa Indica Group]
          Length = 687

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/65 (58%), Positives = 44/65 (67%)
 Frame = +3

Query: 6   HSSKFPYGWVIGSMGVALFLIAVVFLSCIAFKTLHCCGQQRTNRTKDPDQPTSHKFHILK 185
           HS+KFPYGWVIGSMGVAL LIA+  L+ +  K      Q   N+ K PDQ  SHKF +LK
Sbjct: 255 HSTKFPYGWVIGSMGVALALIAIALLALVLCKLSQYNPQAPNNQGKSPDQSISHKFQLLK 314

Query: 186 STSFC 200
           S SFC
Sbjct: 315 SGSFC 319


>ref|XP_003567102.1| PREDICTED: uncharacterized protein LOC100844975 [Brachypodium
           distachyon]
          Length = 675

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/65 (53%), Positives = 41/65 (63%)
 Frame = +3

Query: 6   HSSKFPYGWVIGSMGVALFLIAVVFLSCIAFKTLHCCGQQRTNRTKDPDQPTSHKFHILK 185
           H ++FPYGWVIGSMGVA  LIA+  L  +  K      Q   N+ K PDQP SH F +LK
Sbjct: 243 HPARFPYGWVIGSMGVAFALIAIALLVVVMCKFFQYNHQVPDNQRKSPDQPMSHDFRLLK 302

Query: 186 STSFC 200
           S SFC
Sbjct: 303 SGSFC 307


>ref|XP_002299738.1| predicted protein [Populus trichocarpa] gi|222846996|gb|EEE84543.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = +3

Query: 6   HSSKFPYGWVIGSMGVALFLIAVVFLSCIAFKTLHCCGQQRTNRTKDPDQPTSHKFHILK 185
           H ++ PYGW+IG +G+ L LI +  + C++ K+  C  + R +  K PD   S KFHIL+
Sbjct: 234 HKARVPYGWIIGGLGIGLALIVLCIIICVSLKSSSCLSESRGSHAKPPDGKISQKFHILR 293

Query: 186 STSFC 200
             SFC
Sbjct: 294 KQSFC 298


>ref|XP_002458464.1| hypothetical protein SORBIDRAFT_03g034160 [Sorghum bicolor]
           gi|241930439|gb|EES03584.1| hypothetical protein
           SORBIDRAFT_03g034160 [Sorghum bicolor]
          Length = 664

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +3

Query: 6   HSSKFPYGWVIGSMGVALFLIAVVFLSCIAFKTLHCCGQQRTNRTKDPDQPTSHKFHILK 185
           H +KFPYGWVIGSMGVAL LIA+  L+ + +K      Q   N+ K PD+   HKF +LK
Sbjct: 246 HLTKFPYGWVIGSMGVALALIAIAVLALVLWKFFGYNPQDPNNQGKSPDR---HKFQLLK 302

Query: 186 STSFC 200
           S SFC
Sbjct: 303 SGSFC 307


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