BLASTX nr result

ID: Dioscorea21_contig00017730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017730
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indi...   140   1e-31
ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group] g...   139   2e-31
ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea ma...   133   1e-29
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
          Length = 703

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/97 (70%), Positives = 80/97 (82%)
 Frame = +2

Query: 2   VELIRQRMEEKQIEKNPGSSWIEIKRQTHVFLVGDKSHPRTDEIYLLLKKLHRRMREEGY 181
           VE +R+ ME K I K P SSWIE+ R+ HVFLVGDKSHP+ DEIY LLKKL+ +M EEGY
Sbjct: 491 VEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGY 550

Query: 182 VPDINYVLHDVEDEQKEEDLVHHSEKLAVAFGIIAGP 292
           V DI +VLHDVEDEQKE+D+ +HSE+LAVAFGIIA P
Sbjct: 551 VADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASP 587


>ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
           gi|108707037|gb|ABF94832.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa
           Japonica Group] gi|125585525|gb|EAZ26189.1| hypothetical
           protein OsJ_10058 [Oryza sativa Japonica Group]
           gi|215706461|dbj|BAG93317.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 641

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/97 (70%), Positives = 80/97 (82%)
 Frame = +2

Query: 2   VELIRQRMEEKQIEKNPGSSWIEIKRQTHVFLVGDKSHPRTDEIYLLLKKLHRRMREEGY 181
           VE +R+ ME K I K P SSWIE+ R+ HVFLVGDKSHP+ DEIY LLKKL+ +M EEGY
Sbjct: 491 VEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGY 550

Query: 182 VPDINYVLHDVEDEQKEEDLVHHSEKLAVAFGIIAGP 292
           V DI +VLHDVEDEQKE+D+ +HSE+LAVAFGIIA P
Sbjct: 551 VADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATP 587


>ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
           gi|194705708|gb|ACF86938.1| unknown [Zea mays]
           gi|413956425|gb|AFW89074.1| hypothetical protein
           ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/97 (65%), Positives = 79/97 (81%)
 Frame = +2

Query: 2   VELIRQRMEEKQIEKNPGSSWIEIKRQTHVFLVGDKSHPRTDEIYLLLKKLHRRMREEGY 181
           VE +R+ ME + I K P SSWIE+  + HVFLVGDKSHP+ +EIY LLKKL+ +MREEGY
Sbjct: 485 VENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGY 544

Query: 182 VPDINYVLHDVEDEQKEEDLVHHSEKLAVAFGIIAGP 292
           V D  +VLHDVEDEQK++D+ +HSE+LAVAFGIIA P
Sbjct: 545 VADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATP 581


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/94 (63%), Positives = 77/94 (81%)
 Frame = +2

Query: 11  IRQRMEEKQIEKNPGSSWIEIKRQTHVFLVGDKSHPRTDEIYLLLKKLHRRMREEGYVPD 190
           +R+ M+   I K PG SWIEIKRQ HVFLVGD SHP+T +I+  L +L ++++EEGYVPD
Sbjct: 546 VRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPD 605

Query: 191 INYVLHDVEDEQKEEDLVHHSEKLAVAFGIIAGP 292
            N+VLHDVE+EQKE++LV+HSEKLAV FGII+ P
Sbjct: 606 TNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTP 639


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/95 (64%), Positives = 78/95 (82%)
 Frame = +2

Query: 11  IRQRMEEKQIEKNPGSSWIEIKRQTHVFLVGDKSHPRTDEIYLLLKKLHRRMREEGYVPD 190
           +R+ M+ + + K PG SWIEIKR+ HVFLVGD SH ++ EI+  L KL +RM+EEGYVPD
Sbjct: 140 VRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPD 199

Query: 191 INYVLHDVEDEQKEEDLVHHSEKLAVAFGIIAGPA 295
            N+VLHDVE+EQKE++L +HSEKLAVAFGII+ PA
Sbjct: 200 TNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPA 234


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