BLASTX nr result

ID: Dioscorea21_contig00017719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017719
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6...   124   2e-26
ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6...   122   4e-26
ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6...   121   1e-25
gb|AFK37870.1| unknown [Medicago truncatula]                          120   3e-25

>ref|XP_003531564.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
           gi|255628593|gb|ACU14641.1| unknown [Glycine max]
          Length = 69

 Score =  124 bits (310), Expect = 2e-26
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = +3

Query: 30  MEDEDPIDQKRNLEEICKPKCVRPLRAYQACVERIKGDESGSKHCTGQYFDYWTCVDTCV 209
           M DE+P+DQKR LEE CKPKCV+PL  YQAC++RI GDESG KHCTGQYFDYW+C+D CV
Sbjct: 1   MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCV 60

Query: 210 APKLFGKL 233
           APKLF KL
Sbjct: 61  APKLFTKL 68


>ref|XP_002307493.1| predicted protein [Populus trichocarpa] gi|222856942|gb|EEE94489.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  123 bits (308), Expect = 3e-26
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = +3

Query: 30  MEDEDPIDQKRNLEEICKPKCVRPLRAYQACVERIKGDESGSKHCTGQYFDYWTCVDTCV 209
           M DE+P+D K+ LEE CKPKCVRPL  YQACV+RI+GDESG KHCTGQYFDYW+CVD CV
Sbjct: 1   MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 210 APKLFGKL 233
           APKLF KL
Sbjct: 61  APKLFTKL 68


>ref|XP_003547586.1| PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]
           gi|255630456|gb|ACU15586.1| unknown [Glycine max]
          Length = 69

 Score =  122 bits (307), Expect = 4e-26
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +3

Query: 30  MEDEDPIDQKRNLEEICKPKCVRPLRAYQACVERIKGDESGSKHCTGQYFDYWTCVDTCV 209
           M DE+P+DQKR LEE CKPKCV+PL  YQAC++RI GD+SG KHCTGQYFDYW+C+D CV
Sbjct: 1   MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCV 60

Query: 210 APKLFGKL 233
           APKLF KL
Sbjct: 61  APKLFTKL 68


>ref|XP_004140689.1| PREDICTED: cytochrome b-c1 complex subunit 6-like [Cucumis sativus]
           gi|449528698|ref|XP_004171340.1| PREDICTED: cytochrome
           b-c1 complex subunit 6-like [Cucumis sativus]
          Length = 69

 Score =  121 bits (304), Expect = 1e-25
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +3

Query: 30  MEDEDPIDQKRNLEEICKPKCVRPLRAYQACVERIKGDESGSKHCTGQYFDYWTCVDTCV 209
           M DE+P+DQKR LEE CKPKCV+PL  YQACV+RI+GD+SG KHCTGQYFDYW+C+D CV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 210 APKLFGKL 233
           APKL  KL
Sbjct: 61  APKLLTKL 68


>gb|AFK37870.1| unknown [Medicago truncatula]
          Length = 69

 Score =  120 bits (300), Expect = 3e-25
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +3

Query: 30  MEDEDPIDQKRNLEEICKPKCVRPLRAYQACVERIKGDESGSKHCTGQYFDYWTCVDTCV 209
           M DE+P+D K+ LEE CKPKCVRPL  YQAC++RI+GD+SG KHCTGQYFDYW CVD CV
Sbjct: 1   MADEEPVDPKKLLEESCKPKCVRPLLEYQACIKRIQGDDSGQKHCTGQYFDYWYCVDKCV 60

Query: 210 APKLFGKL 233
           APKLF KL
Sbjct: 61  APKLFTKL 68


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