BLASTX nr result

ID: Dioscorea21_contig00017717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017717
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB38796.1| farnesyltransferase beta subunit, partial [Nicoti...   129   2e-28
emb|CBI34928.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   124   1e-26
tpg|DAA57747.1| TPA: hypothetical protein ZEAMMB73_136151 [Zea m...   120   1e-25
tpg|DAA57746.1| TPA: hypothetical protein ZEAMMB73_136151 [Zea m...   120   1e-25

>gb|AAB38796.1| farnesyltransferase beta subunit, partial [Nicotiana glutinosa]
          Length = 446

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = -2

Query: 241 KLGPNFDVLDANRPWLCYWIVHSIALLGEHVDSELENNVVDFLSRCQDEDXXXXXXXGQM 62
           KLGP+F VLDANRPWLCYWI+HSIALLGE +D++LEN+ +DFLSRCQDED       GQM
Sbjct: 51  KLGPSFSVLDANRPWLCYWILHSIALLGESIDAQLENDAIDFLSRCQDEDGGYGGGPGQM 110

Query: 61  PHLATTYAAVNTLVTLGSER 2
           PHLATTYAAVN+L+TLGS +
Sbjct: 111 PHLATTYAAVNSLITLGSPK 130


>emb|CBI34928.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/80 (71%), Positives = 65/80 (81%)
 Frame = -2

Query: 241 KLGPNFDVLDANRPWLCYWIVHSIALLGEHVDSELENNVVDFLSRCQDEDXXXXXXXGQM 62
           +LGP+F VLDANRPWLCYWI+HSIALLG+ VD ELENN +DFLSRCQD +       GQM
Sbjct: 42  QLGPSFCVLDANRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQM 101

Query: 61  PHLATTYAAVNTLVTLGSER 2
           PHLATTYAA+N L+TLG  R
Sbjct: 102 PHLATTYAAINALITLGGHR 121


>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
           [Vitis vinifera]
          Length = 438

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/80 (71%), Positives = 65/80 (81%)
 Frame = -2

Query: 241 KLGPNFDVLDANRPWLCYWIVHSIALLGEHVDSELENNVVDFLSRCQDEDXXXXXXXGQM 62
           +LGP+F VLDANRPWLCYWI+HSIALLG+ VD ELENN +DFLSRCQD +       GQM
Sbjct: 59  QLGPSFCVLDANRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQM 118

Query: 61  PHLATTYAAVNTLVTLGSER 2
           PHLATTYAA+N L+TLG  R
Sbjct: 119 PHLATTYAAINALITLGGHR 138


>tpg|DAA57747.1| TPA: hypothetical protein ZEAMMB73_136151 [Zea mays]
          Length = 169

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -2

Query: 238 LGPNFDVLDANRPWLCYWIVHSIALLGEHVDSELENNVVDFLSRCQDEDXXXXXXXGQMP 59
           +GP F VLDANRPWLCYW+VH +ALL E +D +LEN+++DFL+RCQD+D       GQ+P
Sbjct: 44  MGPAFHVLDANRPWLCYWMVHPLALLDEALDDDLENDIIDFLARCQDKDGGYSGGPGQLP 103

Query: 58  HLATTYAAVNTLVTLGSER 2
           HLATTYAAVNTLVT+GSER
Sbjct: 104 HLATTYAAVNTLVTIGSER 122


>tpg|DAA57746.1| TPA: hypothetical protein ZEAMMB73_136151 [Zea mays]
          Length = 343

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -2

Query: 238 LGPNFDVLDANRPWLCYWIVHSIALLGEHVDSELENNVVDFLSRCQDEDXXXXXXXGQMP 59
           +GP F VLDANRPWLCYW+VH +ALL E +D +LEN+++DFL+RCQD+D       GQ+P
Sbjct: 44  MGPAFHVLDANRPWLCYWMVHPLALLDEALDDDLENDIIDFLARCQDKDGGYSGGPGQLP 103

Query: 58  HLATTYAAVNTLVTLGSER 2
           HLATTYAAVNTLVT+GSER
Sbjct: 104 HLATTYAAVNTLVTIGSER 122


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