BLASTX nr result

ID: Dioscorea21_contig00017713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017713
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39533.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002279245.1| PREDICTED: F-box protein PP2-B15 [Vitis vini...   126   2e-27
emb|CAN65692.1| hypothetical protein VITISV_022468 [Vitis vinifera]   126   2e-27
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...   122   4e-26

>emb|CBI39533.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/98 (59%), Positives = 78/98 (79%)
 Frame = +2

Query: 245 FSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDDILLRAVDHI 424
           F+KLPEGC+S +LSLTSPP+ C+ ++VS +F +AA SD VWERF+P+D  DIL R V+ +
Sbjct: 6   FNKLPEGCVSIILSLTSPPDACKSSLVSPMFRAAAESDVVWERFLPADYHDILCRLVEPL 65

Query: 425 ECSSKRELYFRLCNPILINDGKMSFFLEKSSGKKCYML 538
            CSS++EL+ RLC+PILI+ G  SF L+K SGKK Y+L
Sbjct: 66  VCSSRKELFLRLCDPILIDGGSKSFRLDKWSGKKSYLL 103



 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/100 (54%), Positives = 73/100 (73%)
 Frame = +2

Query: 239 VDFSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDDILLRAVD 418
           V  + LPEGC+S +LSLTSPP+ C+ ++VS +F +AA SD VWERF+P+D  DIL R  +
Sbjct: 265 VGLNTLPEGCVSTILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDILSRLAE 324

Query: 419 HIECSSKRELYFRLCNPILINDGKMSFFLEKSSGKKCYML 538
            +  SSK+EL+ RLC+P LI+ GK  F L+K SGK  YM+
Sbjct: 325 PLVVSSKKELFLRLCDPSLIDGGKKRFRLDKWSGKNSYMM 364



 Score =  102 bits (253), Expect = 5e-20
 Identities = 47/100 (47%), Positives = 70/100 (70%)
 Frame = +2

Query: 239 VDFSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDDILLRAVD 418
           ++F  LP+ CIS++LS TSP + CR  +VS     A  SD+VWE+F+PSD  +IL R V 
Sbjct: 483 MNFELLPQDCISHILSCTSPRDACRSGLVSTTVRHAGDSDSVWEKFLPSDYQEILSRLVS 542

Query: 419 HIECSSKRELYFRLCNPILINDGKMSFFLEKSSGKKCYML 538
            +  +SK+ELY +LC P+LI++G+ SF + K++G+K Y L
Sbjct: 543 PLVFASKKELYSKLCRPLLIDEGRKSFSISKTTGEKGYTL 582


>ref|XP_002279245.1| PREDICTED: F-box protein PP2-B15 [Vitis vinifera]
          Length = 285

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/98 (59%), Positives = 78/98 (79%)
 Frame = +2

Query: 245 FSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDDILLRAVDHI 424
           F+KLPEGC+S +LSLTSPP+ C+ ++VS +F +AA SD VWERF+P+D  DIL R V+ +
Sbjct: 6   FNKLPEGCVSIILSLTSPPDACKSSLVSPMFRAAAESDVVWERFLPADYHDILCRLVEPL 65

Query: 425 ECSSKRELYFRLCNPILINDGKMSFFLEKSSGKKCYML 538
            CSS++EL+ RLC+PILI+ G  SF L+K SGKK Y+L
Sbjct: 66  VCSSRKELFLRLCDPILIDGGSKSFRLDKWSGKKSYLL 103


>emb|CAN65692.1| hypothetical protein VITISV_022468 [Vitis vinifera]
          Length = 248

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/98 (59%), Positives = 78/98 (79%)
 Frame = +2

Query: 245 FSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDDILLRAVDHI 424
           F+KLPEGC+S +LSLTSPP+ C+ ++VS +F +AA SD VWERF+P+D  DIL R V+ +
Sbjct: 6   FNKLPEGCVSIILSLTSPPDACKSSLVSPMFRAAAESDVVWERFLPADYHDILCRLVEPL 65

Query: 425 ECSSKRELYFRLCNPILINDGKMSFFLEKSSGKKCYML 538
            CSS++EL+ RLC+PILI+ G  SF L+K SGKK Y+L
Sbjct: 66  VCSSRKELFLRLCDPILIDGGSKSFRLDKWSGKKSYLL 103


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 4/111 (3%)
 Frame = +2

Query: 218 AMAEGTGVDFSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDD 397
           A     G  FS LPEGCI++VL+LTSP +VCR + V+ VF SAA SD +WERF+P+D  +
Sbjct: 11  AKHSAAGHGFSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYRE 70

Query: 398 ILLRAVDHI---ECSSKRELYFRLCN-PILINDGKMSFFLEKSSGKKCYML 538
           I+ R+ +       SSK+ELYF LC+ P+LI++GK SF+LEK SGKKCYML
Sbjct: 71  IIARSSESSSWRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYML 121


>ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 349

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 4/111 (3%)
 Frame = +2

Query: 218 AMAEGTGVDFSKLPEGCISNVLSLTSPPEVCRFAMVSQVFFSAAASDTVWERFIPSDIDD 397
           A     G  FS LPEGCI++VL+LTSP +VCR + V+ VF SAA SD +WERF+P+D  +
Sbjct: 11  AKHSAAGHGFSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYRE 70

Query: 398 ILLRAVDHI---ECSSKRELYFRLCN-PILINDGKMSFFLEKSSGKKCYML 538
           I+ R+ +       SSK+ELYF LC+ P+LI++GK SF+LEK SGKKCYML
Sbjct: 71  IIARSSESSSWRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYML 121


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