BLASTX nr result

ID: Dioscorea21_contig00017693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017693
         (1881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ...   479   e-132
ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi...   476   e-131
ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131
ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Gly...   456   e-125
ref|XP_002451957.1| hypothetical protein SORBIDRAFT_04g011030 [S...   451   e-124

>ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 351

 Score =  479 bits (1233), Expect = e-132
 Identities = 231/343 (67%), Positives = 283/343 (82%)
 Frame = -2

Query: 1835 DPAWGKDTVAGVLANVXXXXXXXXXXXXXXXXXXCYRDLLAQSTLWEVLDLREMSRAGER 1656
            +  W ++T+  V+  V                   +  L++  +LW  LD REM++AG+R
Sbjct: 9    EQTWSRETIPKVMKIVSTTISQKDVISLLLVSPWLHHSLISYPSLWLALDFREMNKAGDR 68

Query: 1655 LISALSLARYQNVKRINLEFARDIEDEHFLLLRNKVMKSLHGLESLNLNGCQKITDKGVE 1476
            LISALSL RY++VK+INLEFA+DIED H  ++++K   SL  LESLNLNGCQKI+DKG+E
Sbjct: 69   LISALSLPRYRHVKQINLEFAQDIEDRHLQVIQSKASSSLQNLESLNLNGCQKISDKGIE 128

Query: 1475 AVTSCCPNLKAFSIYWNVRVTDLGIKQLIANCRQIVDLNLSGCKNISDRSLQMIAESYQE 1296
            A+TS CPNLK FSIYWNVRVTD+GIKQL+ NC+ IVDLNLSGCKNISD+SLQ++A+ YQ+
Sbjct: 129  AITSACPNLKVFSIYWNVRVTDVGIKQLVENCKHIVDLNLSGCKNISDKSLQLVADLYQD 188

Query: 1295 LKVLNLTRCIKLTDVGLQQILLKCSYLESLNLYALSSLTDKAYKSIASLANLRFLDLCGA 1116
            +++L+LTRCIKLTD GLQQIL KCS L+SLNLYALS+ TDKAY++I++LA+LR LDLCGA
Sbjct: 189  IELLDLTRCIKLTDDGLQQILSKCSSLKSLNLYALSTFTDKAYRNISNLAHLRILDLCGA 248

Query: 1115 QNLSDEGLSCIAKCKNLVSLNLTWCVRITDTGVLALAQGCPSLEFLSLFGIVGVTDASLE 936
            QNLSDEGLSCIAKCKNL SLNLTWCVR+T+ GV+A+A+GC  LEFLSLFGIVGVTD  LE
Sbjct: 249  QNLSDEGLSCIAKCKNLTSLNLTWCVRVTNAGVIAIAEGCTYLEFLSLFGIVGVTDKCLE 308

Query: 935  ALSKSCSNTLTTFDVNGCIGIKRRSREDLLLLFPYLRCFKVHS 807
            ALS+SCSNT+TT DVNGCIGIKRRSR++LL LFP+LRCFKVHS
Sbjct: 309  ALSRSCSNTITTLDVNGCIGIKRRSRDELLQLFPHLRCFKVHS 351


>ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera]
          Length = 353

 Score =  476 bits (1224), Expect = e-131
 Identities = 236/350 (67%), Positives = 280/350 (80%)
 Frame = -2

Query: 1856 SEMAAGNDPAWGKDTVAGVLANVXXXXXXXXXXXXXXXXXXCYRDLLAQSTLWEVLDLRE 1677
            +E  AG D  W ++T+  VL  V                   +R L++ S+LW VLD RE
Sbjct: 4    TEARAGGDLKWSRETIPKVLRIVGTRLPQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRE 63

Query: 1676 MSRAGERLISALSLARYQNVKRINLEFARDIEDEHFLLLRNKVMKSLHGLESLNLNGCQK 1497
             + AG RL++ALSL RYQ+VK+INLEFA+DIED+H  LL+ K + SL  LESLNLN CQK
Sbjct: 64   TNNAGNRLVAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTKCLDSLQELESLNLNVCQK 123

Query: 1496 ITDKGVEAVTSCCPNLKAFSIYWNVRVTDLGIKQLIANCRQIVDLNLSGCKNISDRSLQM 1317
            I+D+GVE +TS CP LK FSIYWNVRVTD+G+  L+ NC+ IVDLNLSGCKNI+D+SLQ+
Sbjct: 124  ISDRGVETITSACPKLKVFSIYWNVRVTDIGMTHLVKNCKHIVDLNLSGCKNITDKSLQL 183

Query: 1316 IAESYQELKVLNLTRCIKLTDVGLQQILLKCSYLESLNLYALSSLTDKAYKSIASLANLR 1137
            IA++Y +L++LNLTRCIKLTD GLQQILLKCS L+SLNLYALSS TD+AYK I+ L +LR
Sbjct: 184  IADNYPDLELLNLTRCIKLTDGGLQQILLKCSSLQSLNLYALSSFTDEAYKKISLLTDLR 243

Query: 1136 FLDLCGAQNLSDEGLSCIAKCKNLVSLNLTWCVRITDTGVLALAQGCPSLEFLSLFGIVG 957
            FLDLCGAQNLSD+GL CIAKCKNLVSLNLTWCVR+TD GV+A+AQGC SLEFLSLFGIVG
Sbjct: 244  FLDLCGAQNLSDQGLCCIAKCKNLVSLNLTWCVRVTDVGVIAIAQGCTSLEFLSLFGIVG 303

Query: 956  VTDASLEALSKSCSNTLTTFDVNGCIGIKRRSREDLLLLFPYLRCFKVHS 807
            VTD  LEALS+SCSN +TT DVNGCIGIK RSR++LL  FPYLRCFKVHS
Sbjct: 304  VTDKCLEALSRSCSNMITTLDVNGCIGIKGRSRDELLQYFPYLRCFKVHS 353


>ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|222854326|gb|EEE91873.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  474 bits (1221), Expect = e-131
 Identities = 236/340 (69%), Positives = 274/340 (80%)
 Frame = -2

Query: 1826 WGKDTVAGVLANVXXXXXXXXXXXXXXXXXXCYRDLLAQSTLWEVLDLREMSRAGERLIS 1647
            W  +T+  V+  V                   YR L +   LW  LD REM++AG+RLI+
Sbjct: 2    WNTETIPKVMKIVSTKLPQRDLISLLLVSPWLYRTLTSFPPLWMALDFREMNKAGDRLIA 61

Query: 1646 ALSLARYQNVKRINLEFARDIEDEHFLLLRNKVMKSLHGLESLNLNGCQKITDKGVEAVT 1467
            A SL RYQ+VK INLEFA+DIEDEH  +L++K   SL  LESLNLNGCQKI+DKG+EA+T
Sbjct: 62   ATSLPRYQHVKEINLEFAQDIEDEHLEVLQSKCFVSLQKLESLNLNGCQKISDKGIEAIT 121

Query: 1466 SCCPNLKAFSIYWNVRVTDLGIKQLIANCRQIVDLNLSGCKNISDRSLQMIAESYQELKV 1287
            S C  LK FSIYWNVRVTD+GIK ++ NC+QIVDLNLSGCKNISD++LQ+IAE+YQEL+ 
Sbjct: 122  STCSKLKVFSIYWNVRVTDIGIKHVVENCKQIVDLNLSGCKNISDKALQLIAENYQELES 181

Query: 1286 LNLTRCIKLTDVGLQQILLKCSYLESLNLYALSSLTDKAYKSIASLANLRFLDLCGAQNL 1107
            LNLTRCIKLTD GLQQIL KCS L+SLNLYALSS TDKAYK I+SL+ L+FLDLCGAQNL
Sbjct: 182  LNLTRCIKLTDGGLQQILSKCSSLQSLNLYALSSFTDKAYKKISSLSLLKFLDLCGAQNL 241

Query: 1106 SDEGLSCIAKCKNLVSLNLTWCVRITDTGVLALAQGCPSLEFLSLFGIVGVTDASLEALS 927
            SDEGLSCIAKCKN+VSLNLTWCVR+TD G +A+A+GC SLEFLSLFGIVGVTD  LE LS
Sbjct: 242  SDEGLSCIAKCKNIVSLNLTWCVRVTDVGAVAIAEGCTSLEFLSLFGIVGVTDKCLEVLS 301

Query: 926  KSCSNTLTTFDVNGCIGIKRRSREDLLLLFPYLRCFKVHS 807
            + CSNT+TT DVNGCIGIKRRSR++LL LFP LRCFKVHS
Sbjct: 302  RFCSNTVTTLDVNGCIGIKRRSRDELLQLFPRLRCFKVHS 341


>ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Glycine max]
          Length = 353

 Score =  456 bits (1172), Expect = e-125
 Identities = 215/308 (69%), Positives = 260/308 (84%)
 Frame = -2

Query: 1730 YRDLLAQSTLWEVLDLREMSRAGERLISALSLARYQNVKRINLEFARDIEDEHFLLLRNK 1551
            +R LL    LW+ L+ RE++ AG RLI+ALSL RY NVK+INLEFARD+ED H +L+ +K
Sbjct: 46   HRTLLCSQPLWQSLNFRELNNAGNRLIAALSLPRYCNVKQINLEFARDVEDAHLILIMDK 105

Query: 1550 VMKSLHGLESLNLNGCQKITDKGVEAVTSCCPNLKAFSIYWNVRVTDLGIKQLIANCRQI 1371
               SL  LESLNLNGCQKI+D G+EA+TSCCP LK+FSIYWNVRVTD G++ ++ NC+ I
Sbjct: 106  CFNSLQSLESLNLNGCQKISDTGIEAITSCCPQLKSFSIYWNVRVTDRGLQHIVKNCKHI 165

Query: 1370 VDLNLSGCKNISDRSLQMIAESYQELKVLNLTRCIKLTDVGLQQILLKCSYLESLNLYAL 1191
            +DLN+SGCKNISD+  Q++A++Y EL+ LNLTRCIKLTD GL+ +L KC +L+SLNLYAL
Sbjct: 166  IDLNISGCKNISDQGAQLVADNYPELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNLYAL 225

Query: 1190 SSLTDKAYKSIASLANLRFLDLCGAQNLSDEGLSCIAKCKNLVSLNLTWCVRITDTGVLA 1011
            SS TD+AY+ I  LA L+FLDLCGAQNLSDE LSCI+KCKNL SLNLTWCVR+TD GV++
Sbjct: 226  SSFTDEAYRKICLLARLKFLDLCGAQNLSDEALSCISKCKNLESLNLTWCVRVTDEGVIS 285

Query: 1010 LAQGCPSLEFLSLFGIVGVTDASLEALSKSCSNTLTTFDVNGCIGIKRRSREDLLLLFPY 831
            +A+GC SLEFLSLFGIVGVTD  LE LSKSCSN +TT DVNGCIGIK+RSRE+LL LFPY
Sbjct: 286  IAKGCTSLEFLSLFGIVGVTDKCLEELSKSCSNKITTLDVNGCIGIKKRSREELLQLFPY 345

Query: 830  LRCFKVHS 807
            L+CFKVHS
Sbjct: 346  LKCFKVHS 353


>ref|XP_002451957.1| hypothetical protein SORBIDRAFT_04g011030 [Sorghum bicolor]
            gi|241931788|gb|EES04933.1| hypothetical protein
            SORBIDRAFT_04g011030 [Sorghum bicolor]
          Length = 349

 Score =  451 bits (1161), Expect = e-124
 Identities = 228/347 (65%), Positives = 269/347 (77%)
 Frame = -2

Query: 1847 AAGNDPAWGKDTVAGVLANVXXXXXXXXXXXXXXXXXXCYRDLLAQSTLWEVLDLREMSR 1668
            A   D  W ++TV  V+  V                  CYR L+A   LWEVLDLREM  
Sbjct: 3    APAADETWCRETVPRVMELVSPRLPQRDACALLAVSPWCYRALVANPRLWEVLDLREMKN 62

Query: 1667 AGERLISALSLARYQNVKRINLEFARDIEDEHFLLLRNKVMKSLHGLESLNLNGCQKITD 1488
            AG+RLISALSLARY+++K +NLEFA+DIED HF+ L+     SL  LE LNLN CQKI+D
Sbjct: 63   AGDRLISALSLARYRHLKVLNLEFAQDIEDRHFVHLKEMSGISLENLEFLNLNACQKISD 122

Query: 1487 KGVEAVTSCCPNLKAFSIYWNVRVTDLGIKQLIANCRQIVDLNLSGCKNISDRSLQMIAE 1308
            KG+EAVTS CPNL+  +IYW V +TDL I  +  NC+QIVDLNLSGCKNISD+ +Q+IA 
Sbjct: 123  KGIEAVTSLCPNLQRLAIYWIVGLTDLSIGHITKNCKQIVDLNLSGCKNISDKGMQLIAN 182

Query: 1307 SYQELKVLNLTRCIKLTDVGLQQILLKCSYLESLNLYALSSLTDKAYKSIASLANLRFLD 1128
            +YQELK LN+TRC+KLTD GL+Q+LLKCS LESLNLYALSS TD+ YK I SL+NL FLD
Sbjct: 183  NYQELKKLNITRCVKLTDDGLKQVLLKCSSLESLNLYALSSFTDRVYKEIGSLSNLTFLD 242

Query: 1127 LCGAQNLSDEGLSCIAKCKNLVSLNLTWCVRITDTGVLALAQGCPSLEFLSLFGIVGVTD 948
            LCGAQNL+D+GL+CI++C  L  LNLTWCVR+TD G++A+AQGC SLE LSLFGIVGVTD
Sbjct: 243  LCGAQNLTDDGLACISRCGCLTYLNLTWCVRVTDAGIVAIAQGCRSLELLSLFGIVGVTD 302

Query: 947  ASLEALSKSCSNTLTTFDVNGCIGIKRRSREDLLLLFPYLRCFKVHS 807
            A LEALSKSCS++LTT DVNGCIGIKRRSR+DLL LFP L CFKVHS
Sbjct: 303  ACLEALSKSCSSSLTTLDVNGCIGIKRRSRDDLLKLFPSLSCFKVHS 349


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