BLASTX nr result

ID: Dioscorea21_contig00017691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017691
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236735.1| uncharacterized protein LOC100306047 [Glycin...   263   2e-68
ref|XP_003574458.1| PREDICTED: AP-4 complex subunit sigma-like [...   261   7e-68
ref|NP_001064450.1| Os10g0368400 [Oryza sativa Japonica Group] g...   260   2e-67
ref|XP_002308286.1| predicted protein [Populus trichocarpa] gi|2...   260   2e-67
ref|XP_002514188.1| AP-4 complex subunit sigma-1, putative [Rici...   260   2e-67

>ref|NP_001236735.1| uncharacterized protein LOC100306047 [Glycine max]
           gi|356494887|ref|XP_003516313.1| PREDICTED: AP-4 complex
           subunit sigma-like [Glycine max]
           gi|255627383|gb|ACU14036.1| unknown [Glycine max]
          Length = 143

 Score =  263 bits (673), Expect = 2e-68
 Identities = 128/135 (94%), Positives = 132/135 (97%)
 Frame = +2

Query: 80  VNKQGQTRLAQYYEYLTLDERRALEGEIVRKCLARTEHQCSFVEHRNYKVVYRRYASLFF 259
           VNKQGQTRLAQYYEYLTL+ERRALEGEIVRKCLAR E QCSFVEHRNYK+VYRRYASLFF
Sbjct: 9   VNKQGQTRLAQYYEYLTLEERRALEGEIVRKCLARNEQQCSFVEHRNYKIVYRRYASLFF 68

Query: 260 LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETN 439
           LVGVD+DENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVET+
Sbjct: 69  LVGVDDDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETS 128

Query: 440 KQNILTPIQLMDKTS 484
           K NILTPIQLMDKTS
Sbjct: 129 KSNILTPIQLMDKTS 143


>ref|XP_003574458.1| PREDICTED: AP-4 complex subunit sigma-like [Brachypodium
           distachyon] gi|326501244|dbj|BAJ98853.1| predicted
           protein [Hordeum vulgare subsp. vulgare]
           gi|326523491|dbj|BAJ92916.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 143

 Score =  261 bits (668), Expect = 7e-68
 Identities = 127/135 (94%), Positives = 132/135 (97%)
 Frame = +2

Query: 80  VNKQGQTRLAQYYEYLTLDERRALEGEIVRKCLARTEHQCSFVEHRNYKVVYRRYASLFF 259
           VNKQGQTRLAQYYE+L+LDERRALEGEIVRKCLART+ QCSFVEHRNYKVVYRRYASLFF
Sbjct: 9   VNKQGQTRLAQYYEHLSLDERRALEGEIVRKCLARTDQQCSFVEHRNYKVVYRRYASLFF 68

Query: 260 LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETN 439
           LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEK HFMLEEMVMNGCIVET+
Sbjct: 69  LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETS 128

Query: 440 KQNILTPIQLMDKTS 484
           KQNIL PIQLM+KTS
Sbjct: 129 KQNILAPIQLMEKTS 143


>ref|NP_001064450.1| Os10g0368400 [Oryza sativa Japonica Group]
           gi|22830276|gb|AAN08659.1| putative clathrin assembly
           protein [Oryza sativa Japonica Group]
           gi|31431611|gb|AAP53362.1| Adapter-related protein
           complex 4 sigma 1 subunit, putative, expressed [Oryza
           sativa Japonica Group] gi|113639059|dbj|BAF26364.1|
           Os10g0368400 [Oryza sativa Japonica Group]
           gi|125531640|gb|EAY78205.1| hypothetical protein
           OsI_33251 [Oryza sativa Indica Group]
           gi|125574556|gb|EAZ15840.1| hypothetical protein
           OsJ_31256 [Oryza sativa Japonica Group]
          Length = 143

 Score =  260 bits (665), Expect = 2e-67
 Identities = 125/135 (92%), Positives = 132/135 (97%)
 Frame = +2

Query: 80  VNKQGQTRLAQYYEYLTLDERRALEGEIVRKCLARTEHQCSFVEHRNYKVVYRRYASLFF 259
           VNKQGQTR+AQYYE+L++DERRALEGEIVRKCLART+HQCSFVEHRNYKVVYRRYASLFF
Sbjct: 9   VNKQGQTRVAQYYEHLSVDERRALEGEIVRKCLARTDHQCSFVEHRNYKVVYRRYASLFF 68

Query: 260 LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETN 439
           LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEK HFMLEEMVMNGCIVET+
Sbjct: 69  LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIVETS 128

Query: 440 KQNILTPIQLMDKTS 484
           KQNIL PI LM+KTS
Sbjct: 129 KQNILAPIHLMEKTS 143


>ref|XP_002308286.1| predicted protein [Populus trichocarpa] gi|222854262|gb|EEE91809.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  260 bits (665), Expect = 2e-67
 Identities = 125/135 (92%), Positives = 132/135 (97%)
 Frame = +2

Query: 80  VNKQGQTRLAQYYEYLTLDERRALEGEIVRKCLARTEHQCSFVEHRNYKVVYRRYASLFF 259
           VNKQGQTRLAQYYE+LTL+ERRALEGEIVRKCLAR + QCSFVEHRNYK++YRRYASLFF
Sbjct: 9   VNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIIYRRYASLFF 68

Query: 260 LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETN 439
           LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVET+
Sbjct: 69  LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETS 128

Query: 440 KQNILTPIQLMDKTS 484
           K NIL+PIQLMDKTS
Sbjct: 129 KSNILSPIQLMDKTS 143


>ref|XP_002514188.1| AP-4 complex subunit sigma-1, putative [Ricinus communis]
           gi|223546644|gb|EEF48142.1| AP-4 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 143

 Score =  260 bits (664), Expect = 2e-67
 Identities = 126/135 (93%), Positives = 131/135 (97%)
 Frame = +2

Query: 80  VNKQGQTRLAQYYEYLTLDERRALEGEIVRKCLARTEHQCSFVEHRNYKVVYRRYASLFF 259
           VNKQGQTRLAQYYE+LTL+ERRALEGEIVRKCLAR + QCSFVEHRNYK+VYRRYASLFF
Sbjct: 9   VNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRRYASLFF 68

Query: 260 LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETN 439
           LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVET+
Sbjct: 69  LVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVETS 128

Query: 440 KQNILTPIQLMDKTS 484
           K NIL PIQLMDKTS
Sbjct: 129 KANILAPIQLMDKTS 143


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