BLASTX nr result

ID: Dioscorea21_contig00017660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017660
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA40555.1| TNP2 [Antirrhinum majus]                              105   3e-21
gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subc...    94   9e-18
ref|XP_002449672.1| hypothetical protein SORBIDRAFT_05g021440 [S...    92   3e-17
ref|NP_001052085.1| Os04g0128300 [Oryza sativa Japonica Group] g...    90   2e-16
ref|NP_001059784.1| Os07g0516500 [Oryza sativa Japonica Group] g...    90   2e-16

>emb|CAA40555.1| TNP2 [Antirrhinum majus]
          Length = 752

 Score =  105 bits (263), Expect = 3e-21
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = -3

Query: 326 MNKSWMHKSRLSDEYAEGVEAFLDFAFDKSSEDNMIVCPCVKCANVRWHTREVVEEHLLC 147
           M+KSWMHKSRL++EY  G++ FLDFAFD    +  I+CPC +C N  W  RE  +EHL+ 
Sbjct: 6   MDKSWMHKSRLTEEYENGLDQFLDFAFDNVCLNGKIICPCKQCKNALWMDRETAKEHLII 65

Query: 146 DGILRGYTCWFFHGERAPSSTSNLDD 69
           DG ++GYT W  HGE + +S +N+ +
Sbjct: 66  DGFIKGYTHWVIHGEGSSNSQNNIQN 91


>gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 1846

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 40/85 (47%), Positives = 54/85 (63%)
 Frame = -3

Query: 326 MNKSWMHKSRLSDEYAEGVEAFLDFAFDKSSEDNMIVCPCVKCANVRWHTREVVEEHLLC 147
           M+K+WM + R +  Y +GV+ FLDFAF KS+  + I+CPC KC N  W  R  + E L+C
Sbjct: 1   MDKAWMDEPRHTQIYIQGVDNFLDFAFSKSAIGDKILCPCRKCVNSSWKNRSDIREDLIC 60

Query: 146 DGILRGYTCWFFHGERAPSSTSNLD 72
           DG ++GY  W FHGE + S   N D
Sbjct: 61  DGFVKGYRTWMFHGETSSSFVDNHD 85


>ref|XP_002449672.1| hypothetical protein SORBIDRAFT_05g021440 [Sorghum bicolor]
           gi|241935515|gb|EES08660.1| hypothetical protein
           SORBIDRAFT_05g021440 [Sorghum bicolor]
          Length = 719

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 39/83 (46%), Positives = 54/83 (65%)
 Frame = -3

Query: 326 MNKSWMHKSRLSDEYAEGVEAFLDFAFDKSSEDNMIVCPCVKCANVRWHTREVVEEHLLC 147
           M+K+WM + R +  Y EGV+ FL+FAF  S++ N I+CPC  C N  W  R +V EHL+C
Sbjct: 1   MDKTWMDQPRQTLVYREGVDMFLEFAFSNSAKGNQILCPCKACKNSCWRIRSIVLEHLIC 60

Query: 146 DGILRGYTCWFFHGERAPSSTSN 78
           DG + GY  W  HGE + S ++N
Sbjct: 61  DGFMEGYITWVNHGEPSSSFSTN 83


>ref|NP_001052085.1| Os04g0128300 [Oryza sativa Japonica Group]
           gi|113563656|dbj|BAF13999.1| Os04g0128300 [Oryza sativa
           Japonica Group] gi|215701358|dbj|BAG92782.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 121

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/75 (53%), Positives = 45/75 (60%)
 Frame = -3

Query: 326 MNKSWMHKSRLSDEYAEGVEAFLDFAFDKSSEDNMIVCPCVKCANVRWHTREVVEEHLLC 147
           M+K WM  SR S EY  GV  F+DFA   S+ DN I+CPC  C N  W     V EHL+C
Sbjct: 1   MDKGWMKASRSSIEYNIGVNKFIDFALSTSASDNRILCPCKTCGNRYWLGEHEVREHLIC 60

Query: 146 DGILRGYTCWFFHGE 102
           DG L GYT W  HGE
Sbjct: 61  DGFLAGYTSWIHHGE 75


>ref|NP_001059784.1| Os07g0516500 [Oryza sativa Japonica Group]
           gi|113611320|dbj|BAF21698.1| Os07g0516500 [Oryza sativa
           Japonica Group] gi|125605476|gb|EAZ44512.1| hypothetical
           protein OsJ_29130 [Oryza sativa Japonica Group]
           gi|215712374|dbj|BAG94501.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767417|dbj|BAG99645.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 294

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/80 (48%), Positives = 48/80 (60%)
 Frame = -3

Query: 326 MNKSWMHKSRLSDEYAEGVEAFLDFAFDKSSEDNMIVCPCVKCANVRWHTREVVEEHLLC 147
           M+K WM  SR S EY  GV+ F++FA   S+ +N I+CPC  C N  W     V EHL+C
Sbjct: 1   MDKDWMKTSRSSAEYNIGVDKFIEFALSNSAHNNRIICPCKNCGNRYWLGEHKVREHLIC 60

Query: 146 DGILRGYTCWFFHGERAPSS 87
           DG L GYT W  HGE   +S
Sbjct: 61  DGFLAGYTSWIHHGESMSTS 80


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