BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017629
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis th...    94   1e-17
ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab...    93   3e-17
ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...    92   3e-17
emb|CBI20856.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...    92   6e-17

>ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis thaliana]
           gi|79314404|ref|NP_001030817.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314427|ref|NP_001030818.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314448|ref|NP_001030819.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|145332769|ref|NP_001078250.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|334185757|ref|NP_001190019.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis
           thaliana] gi|27808554|gb|AAO24557.1| At3g46210
           [Arabidopsis thaliana] gi|110736314|dbj|BAF00127.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis
           thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210
           [Arabidopsis thaliana] gi|332644608|gb|AEE78129.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644609|gb|AEE78130.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644610|gb|AEE78131.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644611|gb|AEE78132.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644612|gb|AEE78133.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644613|gb|AEE78134.1| exosome complex component
           RRP46 [Arabidopsis thaliana]
          Length = 239

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/66 (66%), Positives = 52/66 (78%)
 Frame = -2

Query: 240 VAICCGLIENGSLILDPTKIEEQKLQAFANLVFPNPPTSVIPKGSSSSAEEPFEHGIITS 61
           VAICC L ENG L+LDP K+EE+K+ AFA LVFPN   SV+P+GSS +  EP EHGIITS
Sbjct: 139 VAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITS 198

Query: 60  VTHGAM 43
           +THG M
Sbjct: 199 ITHGVM 204


>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
           lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
           ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/66 (66%), Positives = 52/66 (78%)
 Frame = -2

Query: 240 VAICCGLIENGSLILDPTKIEEQKLQAFANLVFPNPPTSVIPKGSSSSAEEPFEHGIITS 61
           VAICC L +NG L+LDP K+EE+K+ AFA LVFPN   SV+P+GSS +  EP EHGIITS
Sbjct: 139 VAICCCLADNGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITS 198

Query: 60  VTHGAM 43
           VTHG M
Sbjct: 199 VTHGVM 204


>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = -2

Query: 240 VAICCGLIENGSLILDPTKIEEQKLQAFANLVFPNPPTSVIPKGSSSSAEEPFEHGIITS 61
           VAICC L E+G +ILDPTK+EEQK++AFA LVFPN   S+IP+GSS    E  EHGIITS
Sbjct: 141 VAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITS 200

Query: 60  VTHGAM 43
           VTHG M
Sbjct: 201 VTHGVM 206


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = -2

Query: 240 VAICCGLIENGSLILDPTKIEEQKLQAFANLVFPNPPTSVIPKGSSSSAEEPFEHGIITS 61
           VAICC L E+G +ILDPTK+EEQK++AFA LVFPN   S+IP+GSS    E  EHGIITS
Sbjct: 139 VAICCCLTESGYVILDPTKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITS 198

Query: 60  VTHGAM 43
           VTHG M
Sbjct: 199 VTHGVM 204


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/66 (66%), Positives = 52/66 (78%)
 Frame = -2

Query: 240 VAICCGLIENGSLILDPTKIEEQKLQAFANLVFPNPPTSVIPKGSSSSAEEPFEHGIITS 61
           VAI C L ENG +ILDPTKIEE+K++A  +LVFPN P SV+P+GS+    EP EHGIITS
Sbjct: 139 VAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITS 198

Query: 60  VTHGAM 43
           VT GAM
Sbjct: 199 VTQGAM 204