BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017575
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...    65   6e-09
dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsi...    61   1e-07
ref|NP_001185314.1| sigma factor A [Arabidopsis thaliana] gi|332...    61   1e-07
gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]              61   1e-07

>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = -2

Query: 308 IMATAAVIGISTGKRLLSTSFCPSDLGDKFLHIQEHGLGQFXXXXXXXXXXXXXXXSQFG 129
           +MATAAVIG+S+GKRLLS+SF  SDL +K  ++ +HG+  +               S +G
Sbjct: 1   MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGI-TYYPTATTKNVIVAKKSSNYG 59

Query: 128 PNLP-ANRHLQAIQAIREHVDSSALST 51
           P+ P +NR+  +I+A++EHVD+++ S+
Sbjct: 60  PSFPSSNRNSHSIKALKEHVDTASASS 86


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -2

Query: 305 MATAAVIGISTGKRLLSTSFCPSDLGDKFLHIQEHGLGQFXXXXXXXXXXXXXXXSQFGP 126
           MATAAVIG+S GKRLLS++F  SDL +K     EHGL  +               S +GP
Sbjct: 1   MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHY-QITSTKTLIVAKKSSNYGP 59

Query: 125 NLP-ANRHLQAIQAIREHVD-SSALSTMET 42
           + P +NR+ Q+I+A++EHVD +SA ST  T
Sbjct: 60  SFPSSNRNTQSIKALKEHVDTASAPSTAAT 89


>dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 502

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -2

Query: 305 MATAAVIGISTGKRLLSTSFCPSDLGDKFLHIQEHGLGQFXXXXXXXXXXXXXXXSQFGP 126
           MATAAVIG++TGKRLLS+SF  SD+ +KFL + +H   Q+               S + P
Sbjct: 1   MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQY-HIASTKSGITAKKASNYSP 59

Query: 125 NLP-ANRHLQAIQAIREHVD 69
           + P +NRH Q+ +A++E VD
Sbjct: 60  SFPSSNRHTQSAKALKESVD 79


>ref|NP_001185314.1| sigma factor A [Arabidopsis thaliana] gi|332196178|gb|AEE34299.1|
           sigma factor A [Arabidopsis thaliana]
          Length = 498

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -2

Query: 305 MATAAVIGISTGKRLLSTSFCPSDLGDKFLHIQEHGLGQFXXXXXXXXXXXXXXXSQFGP 126
           MATAAVIG++TGKRLLS+SF  SD+ +KFL + +H   Q+               S + P
Sbjct: 1   MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQY-HIASTKSGITAKKASNYSP 59

Query: 125 NLP-ANRHLQAIQAIREHVD 69
           + P +NRH Q+ +A++E VD
Sbjct: 60  SFPSSNRHTQSAKALKESVD 79


>gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]
          Length = 502

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -2

Query: 305 MATAAVIGISTGKRLLSTSFCPSDLGDKFLHIQEHGLGQFXXXXXXXXXXXXXXXSQFGP 126
           MATAAVIG++TGKRLLS+SF  SD+ +KFL + +H   Q+               S + P
Sbjct: 1   MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQY-HIASTKSGITAKKASNYSP 59

Query: 125 NLP-ANRHLQAIQAIREHVD 69
           + P +NRH Q+ +A++E VD
Sbjct: 60  SFPSSNRHTQSAKALKESVD 79