BLASTX nr result

ID: Dioscorea21_contig00017556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017556
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containin...   110   1e-22
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   110   2e-22
sp|Q6K977.2|C3H19_ORYSJ RecName: Full=Zinc finger CCCH domain-co...   109   2e-22
emb|CBI28171.3| unnamed protein product [Vitis vinifera]              108   4e-22
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]   108   4e-22

>ref|XP_003532678.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
           [Glycine max]
          Length = 710

 Score =  110 bits (275), Expect = 1e-22
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = +2

Query: 53  IEPPEMDGADEARKRKTDCVYFLASPLTCRKGSECEYRHNDSARFNPIDCCYWLAGDCLN 232
           ++P      DEA KR TDCVYFLASPLTC+KG+ECEYRH++ AR NP DC YWL+G+CLN
Sbjct: 13  VQPTPPSSQDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCRYWLSGNCLN 72

Query: 233 PICAFRHP 256
           P C FRHP
Sbjct: 73  PKCPFRHP 80


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score =  110 bits (274), Expect = 2e-22
 Identities = 46/63 (73%), Positives = 51/63 (80%)
 Frame = +2

Query: 68  MDGADEARKRKTDCVYFLASPLTCRKGSECEYRHNDSARFNPIDCCYWLAGDCLNPICAF 247
           M   ++ +KR TDCVYFLASPLTC+KG ECEYRHN+ AR NP DC YWLAGDC NP CAF
Sbjct: 1   MQMEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAF 60

Query: 248 RHP 256
           RHP
Sbjct: 61  RHP 63


>sp|Q6K977.2|C3H19_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 19;
           Short=OsC3H19 gi|125584263|gb|EAZ25194.1| hypothetical
           protein OsJ_08993 [Oryza sativa Japonica Group]
          Length = 647

 Score =  109 bits (273), Expect = 2e-22
 Identities = 45/69 (65%), Positives = 55/69 (79%)
 Frame = +2

Query: 50  AIEPPEMDGADEARKRKTDCVYFLASPLTCRKGSECEYRHNDSARFNPIDCCYWLAGDCL 229
           A+ PP +D  +  R+R TDC+YFLASPLTC+KGSECEYRH+D+AR NP DC YW  G+C 
Sbjct: 4   AVRPP-VDAEEARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCA 62

Query: 230 NPICAFRHP 256
           NP C+FRHP
Sbjct: 63  NPKCSFRHP 71


>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  108 bits (271), Expect = 4e-22
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +2

Query: 80  DEARKRKTDCVYFLASPLTCRKGSECEYRHNDSARFNPIDCCYWLAGDCLNPICAFRHP 256
           DE +KR TDCVYFLASPLTC+KG +CEYRH++ AR NP DC YWL+G CLNP CAFRHP
Sbjct: 3   DELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHP 61


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score =  108 bits (271), Expect = 4e-22
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +2

Query: 80  DEARKRKTDCVYFLASPLTCRKGSECEYRHNDSARFNPIDCCYWLAGDCLNPICAFRHP 256
           DE +KR TDCVYFLASPLTC+KG +CEYRH++ AR NP DC YWL+G CLNP CAFRHP
Sbjct: 3   DELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRHP 61


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