BLASTX nr result
ID: Dioscorea21_contig00017536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00017536
(744 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi... 318 6e-85
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi... 276 3e-72
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi... 275 6e-72
emb|CBI39605.3| unnamed protein product [Vitis vinifera] 274 2e-71
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 274 2e-71
>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
[Vitis vinifera]
Length = 640
Score = 318 bits (816), Expect = 6e-85
Identities = 152/232 (65%), Positives = 184/232 (79%)
Frame = +1
Query: 1 CCLVDLYGRCGMLDQAEEVIRKMPMKPNSAVWGALLNSCRIHGNSLLGEVVGKKLIELES 180
CC+VDLYGR GMLDQA+ VI+ MP KPNSA+WGALLN+CRIHG++ LGE VGK+L+EL+
Sbjct: 409 CCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDP 468
Query: 181 NNSGRYVLLSNIYAANGRWEDVAELRRVMKERGVTKLPGSSFIDLKGHVYEFVAGDNVHP 360
N+ GRYVLLSNIYAA GRW+ VAELRR+M+ER V+K PG SFIDL ++EFVAGD+ HP
Sbjct: 469 NHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHP 528
Query: 361 QSKEIYVMLSEMMKKLMLAGYKANTGEALLGMDEEEKETAVSYHSEKLALAFGLINTEPG 540
Q + IY L EM ++L AGYK +TG+ LL MDEEEKETA+ +HSEKLA+AFGLI T+PG
Sbjct: 529 QLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPG 588
Query: 541 TTIRITKNLPVCSDCHTATKMLSKIYXXXXXXXXXXXXXXXKDGICSCNDFW 696
TTIRITKNL VC+DCH+ATK++SKIY +DG CSC DFW
Sbjct: 589 TTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 666
Score = 276 bits (706), Expect = 3e-72
Identities = 132/231 (57%), Positives = 168/231 (72%)
Frame = +1
Query: 4 CLVDLYGRCGMLDQAEEVIRKMPMKPNSAVWGALLNSCRIHGNSLLGEVVGKKLIELESN 183
C+VDL GR G+ +AE++I MPMKPN+AVWGALL +CRIHGN L E VGK L+ELE
Sbjct: 436 CMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495
Query: 184 NSGRYVLLSNIYAANGRWEDVAELRRVMKERGVTKLPGSSFIDLKGHVYEFVAGDNVHPQ 363
NSGRYVLLSNIYA GR++DV+++R++MK+RG+ +PG S +DL G V+EF GD HPQ
Sbjct: 496 NSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQ 555
Query: 364 SKEIYVMLSEMMKKLMLAGYKANTGEALLGMDEEEKETAVSYHSEKLALAFGLINTEPGT 543
KEIY L + ++L +AG+ +T + L +DEEEKETAV+YHSEKLA+AFGLINT PG
Sbjct: 556 MKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGK 615
Query: 544 TIRITKNLPVCSDCHTATKMLSKIYXXXXXXXXXXXXXXXKDGICSCNDFW 696
I I KNL VC DCH+ATK++S+I+ K+G CSC DFW
Sbjct: 616 RIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
[Cucumis sativus]
Length = 666
Score = 275 bits (704), Expect = 6e-72
Identities = 132/231 (57%), Positives = 167/231 (72%)
Frame = +1
Query: 4 CLVDLYGRCGMLDQAEEVIRKMPMKPNSAVWGALLNSCRIHGNSLLGEVVGKKLIELESN 183
C+VDL GR G+ +AE++I MPMKPN+AVWGALL +CRIHGN L E VGK L+ELE
Sbjct: 436 CMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495
Query: 184 NSGRYVLLSNIYAANGRWEDVAELRRVMKERGVTKLPGSSFIDLKGHVYEFVAGDNVHPQ 363
NSGRYVLLSNIYA GR++DV+++R++MK RG+ +PG S +DL G V+EF GD HPQ
Sbjct: 496 NSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQ 555
Query: 364 SKEIYVMLSEMMKKLMLAGYKANTGEALLGMDEEEKETAVSYHSEKLALAFGLINTEPGT 543
KEIY L + ++L +AG+ +T + L +DEEEKETAV+YHSEKLA+AFGLINT PG
Sbjct: 556 MKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGK 615
Query: 544 TIRITKNLPVCSDCHTATKMLSKIYXXXXXXXXXXXXXXXKDGICSCNDFW 696
I I KNL VC DCH+ATK++S+I+ K+G CSC DFW
Sbjct: 616 RIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 274 bits (700), Expect = 2e-71
Identities = 130/232 (56%), Positives = 167/232 (71%), Gaps = 1/232 (0%)
Frame = +1
Query: 4 CLVDLYGRCGMLDQAEEVIRKMPMKPNSAVWGALLNSCRIHGNSLLGEVVGKKLIELESN 183
C+VDL GR G+L +AE+V+ +P +P AVWGALL +CR HGN LGE VGK L+ELE
Sbjct: 393 CIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQ 452
Query: 184 NSGRYVLLSNIYAANGRWEDVAELRRVMKERGVTKLPGSSFIDL-KGHVYEFVAGDNVHP 360
NSGRY LLSNIYA GRWE+V E+R++MKERG+ PG+S IDL +G V++F+ GD HP
Sbjct: 453 NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHP 512
Query: 361 QSKEIYVMLSEMMKKLMLAGYKANTGEALLGMDEEEKETAVSYHSEKLALAFGLINTEPG 540
Q K+IY ML ++ ++L + GY+ + + L +DEEEKETAV HSEKLA+ FGLINT PG
Sbjct: 513 QVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPG 572
Query: 541 TTIRITKNLPVCSDCHTATKMLSKIYXXXXXXXXXXXXXXXKDGICSCNDFW 696
TTIRI KNL VC DCH+ATK++S++Y ++G CSC DFW
Sbjct: 573 TTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 274 bits (700), Expect = 2e-71
Identities = 130/232 (56%), Positives = 167/232 (71%), Gaps = 1/232 (0%)
Frame = +1
Query: 4 CLVDLYGRCGMLDQAEEVIRKMPMKPNSAVWGALLNSCRIHGNSLLGEVVGKKLIELESN 183
C+VDL GR G+L +AE+V+ +P +P AVWGALL +CR HGN LGE VGK L+ELE
Sbjct: 441 CIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQ 500
Query: 184 NSGRYVLLSNIYAANGRWEDVAELRRVMKERGVTKLPGSSFIDL-KGHVYEFVAGDNVHP 360
NSGRY LLSNIYA GRWE+V E+R++MKERG+ PG+S IDL +G V++F+ GD HP
Sbjct: 501 NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHP 560
Query: 361 QSKEIYVMLSEMMKKLMLAGYKANTGEALLGMDEEEKETAVSYHSEKLALAFGLINTEPG 540
Q K+IY ML ++ ++L + GY+ + + L +DEEEKETAV HSEKLA+ FGLINT PG
Sbjct: 561 QVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPG 620
Query: 541 TTIRITKNLPVCSDCHTATKMLSKIYXXXXXXXXXXXXXXXKDGICSCNDFW 696
TTIRI KNL VC DCH+ATK++S++Y ++G CSC DFW
Sbjct: 621 TTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672