BLASTX nr result
ID: Dioscorea21_contig00017518
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00017518 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera] 65 7e-09 ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit... 64 1e-08 ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi... 61 8e-08 ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like... 59 3e-07 >emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera] Length = 543 Score = 64.7 bits (156), Expect = 7e-09 Identities = 51/108 (47%), Positives = 62/108 (57%), Gaps = 12/108 (11%) Frame = -2 Query: 438 KIWLRQKKKS-SVVSGDFSTRAFSFRLSL--VRGITGDSKMKSNVSEP-----DELE--- 292 KIWLR KK++ S + D S RAFS+R + D K+K NVS ELE Sbjct: 432 KIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAAXDXKLK-NVSSSTGRTVSELEIGR 490 Query: 291 -KSGSSEFGVDVEIGSSNSGAVLKAEEGPSFARRTLLWLGGRQNKVVN 151 ++G SE G D E+ S NS + PSFARRTLLWL GRQNKVV+ Sbjct: 491 WENGGSELGCDEEMQSCNS--LDSQANPPSFARRTLLWLMGRQNKVVH 536 >ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|222855359|gb|EEE92906.1| predicted protein [Populus trichocarpa] Length = 464 Score = 64.3 bits (155), Expect = 1e-08 Identities = 38/96 (39%), Positives = 51/96 (53%) Frame = -2 Query: 438 KIWLRQKKKSSVVSGDFSTRAFSFRLSLVRGITGDSKMKSNVSEPDELEKSGSSEFGVDV 259 KIWLR KK+ +G+ S RAFSFR + + + D +K + D + + Sbjct: 381 KIWLRGKKEKQSSTGESSRRAFSFRFPVNKNVVADDDLKMRKGDSDSCHR---------L 431 Query: 258 EIGSSNSGAVLKAEEGPSFARRTLLWLGGRQNKVVN 151 E+ E+ PSFARRTLLWL GRQNKVV+ Sbjct: 432 EL----------QEKTPSFARRTLLWLVGRQNKVVH 457 >ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera] Length = 543 Score = 64.3 bits (155), Expect = 1e-08 Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 11/107 (10%) Frame = -2 Query: 438 KIWLRQKKKS-SVVSGDFSTRAFSFRLSLVRGITGDSKMK-SNVSEP-----DELE---- 292 KIWLR KK++ S + D S RAFS+R + +K NVS ELE Sbjct: 432 KIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAADDLKLKNVSSSTGRTVSELEIGRW 491 Query: 291 KSGSSEFGVDVEIGSSNSGAVLKAEEGPSFARRTLLWLGGRQNKVVN 151 ++G SE G D E+ S NS + PSFARRTLLWL GRQNKVV+ Sbjct: 492 ENGGSELGCDEEMQSCNS--LDSQANPPSFARRTLLWLMGRQNKVVH 536 >ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi|355511288|gb|AES92430.1| RING finger protein [Medicago truncatula] Length = 511 Score = 61.2 bits (147), Expect = 8e-08 Identities = 50/110 (45%), Positives = 58/110 (52%), Gaps = 14/110 (12%) Frame = -2 Query: 438 KIWLRQKK-KSSVVSGDFSTRAFSFRLSL----------VRGITGDSKMKSNVSEPD--E 298 KIWLR KK K + D S RA SFR L ++G G +S VSE D + Sbjct: 397 KIWLRGKKDKKNGDVTDSSRRAVSFRFPLQSNVGSGNDDLKGKNGMFHTRSTVSEMDFGK 456 Query: 297 LEKSGSSEF-GVDVEIGSSNSGAVLKAEEGPSFARRTLLWLGGRQNKVVN 151 E G SEF G D E S S + PSFARRTLLWL G+QNKVV+ Sbjct: 457 WENGGGSEFSGYDEENQSCYS--MDSQARAPSFARRTLLWLTGKQNKVVH 504 >ref|XP_003549510.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max] Length = 522 Score = 59.3 bits (142), Expect = 3e-07 Identities = 50/118 (42%), Positives = 58/118 (49%), Gaps = 22/118 (18%) Frame = -2 Query: 438 KIWLRQKKKSSVVSGDFSTRAFSFRL----SLVRGITGDSK---------------MKSN 316 KIWLR KK D S RA SFR S+V +G + +S Sbjct: 401 KIWLRGKKDKPNSVADSSRRAVSFRFPAKSSVVTAASGSAHDDDDDDLKGKNCKFDTRST 460 Query: 315 VSEPD--ELEKSGSSEFGVDVEIGSSNSGAVLKAEEGPSFARRTLLWL-GGRQNKVVN 151 +SE D + E G SEF D E S S +A PSFARRTLLWL GGRQNKVV+ Sbjct: 461 ISEMDIGKWENGGGSEFDYDDENQSCYSLDSSQAR-APSFARRTLLWLTGGRQNKVVH 517