BLASTX nr result

ID: Dioscorea21_contig00017513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017513
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...   103   4e-20
emb|CBI40063.3| unnamed protein product [Vitis vinifera]              100   3e-19
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|NP_001053148.1| Os04g0488100 [Oryza sativa Japonica Group] g...    81   4e-13
gb|EEE61227.1| hypothetical protein OsJ_15266 [Oryza sativa Japo...    75   2e-11

>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
            vinifera]
          Length = 756

 Score =  103 bits (258), Expect = 4e-20
 Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 5/276 (1%)
 Frame = +3

Query: 3    NCNFHEECNIEDASSADRSPRTSLDKCYHRETTSHAEFSSACFTPLADVLPSYMMDIDEE 182
            N    EE  ++D    +      LD+    +  S  E  S    P  D L   +MD  + 
Sbjct: 299  NVRPQEEITLQDTLKNEGIRHYFLDQYRFEDVASQPETCSTISPPDEDFLLPCLMDTAQL 358

Query: 183  INKIYKSDGGEAGGKEFREDSDHTEYCNNLETMVARNILGSTFFDMENGNHEHSESLEEI 362
            ++ ++     EA  ++FR+ S     C +L+      I     FD E+ ++    SLE  
Sbjct: 359  VSSLHDLSSIEASMEKFRDCSFSQGECLDLQLFHRVEIDIGGPFDGEHHSNGEQTSLEMT 418

Query: 363  VSQTIQNNSHVNQPEIHVELVNLPETI--TSESHKDISLEGLTEDRTPTKPHDSIICDKD 536
             S+   N  H    ++ +E  ++P T   T +S   ++ EG     T     +S + D  
Sbjct: 419  SSE---NRRH----QVTIECHSVPNTFDATPQSKLQVTAEGHRVTNTLDATPESNLPDAS 471

Query: 537  QGPK---LMVTTPAQKERFQLLRKRKYSLDETSVLTNNSLKRGIMNSSNLVCERRKLPIT 707
                   ++V TP +KE  ++ RKRK   DE  VL++  LK+ I +SS+L+ +RRK+P T
Sbjct: 472  GSTTPEFIIVHTPTKKEHARIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHT 531

Query: 708  RLDIWKACRFANVQEVFMEPLITCMPLELKALYKGK 815
              D WK  + AN+ + F+E LI C+ LEL++L+  K
Sbjct: 532  AYDAWKVYQIANLSQGFLEALIPCISLELRSLFHAK 567


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  100 bits (250), Expect = 3e-19
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 5/253 (1%)
 Frame = +3

Query: 72  LDKCYHRETTSHAEFSSACFTPLADVLPSYMMDIDEEINKIYKSDGGEAGGKEFREDSDH 251
           LD+    +  S  E  S    P  D L   +MD  + ++ ++     EA  ++FR+ S  
Sbjct: 187 LDQYRFEDVASQPETCSTISPPDEDFLLPCLMDTAQLVSSLHDLSSIEASMEKFRDCSFS 246

Query: 252 TEYCNNLETMVARNILGSTFFDMENGNHEHSESLEEIVSQTIQNNSHVNQPEIHVELVNL 431
              C +L+      I     FD E+ ++    SLE   S+   N  H    ++ +E  ++
Sbjct: 247 QGECLDLQLFHRVEIDIGGPFDGEHHSNGEQTSLEMTSSE---NRRH----QVTIECHSV 299

Query: 432 PETI--TSESHKDISLEGLTEDRTPTKPHDSIICDKDQGPK---LMVTTPAQKERFQLLR 596
           P T   T +S   ++ EG     T     +S + D         ++V TP +KE  ++ R
Sbjct: 300 PNTFDATPQSKLQVTAEGHRVTNTLDATPESNLPDASGSTTPEFIIVHTPTKKEHARIPR 359

Query: 597 KRKYSLDETSVLTNNSLKRGIMNSSNLVCERRKLPITRLDIWKACRFANVQEVFMEPLIT 776
           KRK   DE  VL++  LK+ I +SS+L+ +RRK+P T  D WK  + AN+ + F+E LI 
Sbjct: 360 KRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLEALIP 419

Query: 777 CMPLELKALYKGK 815
           C+ LEL++L+  K
Sbjct: 420 CISLELRSLFHAK 432


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 43/89 (48%), Positives = 61/89 (68%)
 Frame = +3

Query: 549 LMVTTPAQKERFQLLRKRKYSLDETSVLTNNSLKRGIMNSSNLVCERRKLPITRLDIWKA 728
           ++++TPA KE  + LRKRK   D+  V  NN +K  I N+ +LV +RRKLP T   +WKA
Sbjct: 374 MVISTPAAKEHARALRKRKCFFDDVVVFPNNVIKECIENTGDLVSKRRKLPHTAFAVWKA 433

Query: 729 CRFANVQEVFMEPLITCMPLELKALYKGK 815
           CRF+N+ + F+EPLI C  LEL +L++ K
Sbjct: 434 CRFSNLDKCFLEPLIPCASLELGSLFRTK 462


>ref|NP_001053148.1| Os04g0488100 [Oryza sativa Japonica Group]
           gi|38344238|emb|CAD41331.2| OJ991113_30.15 [Oryza sativa
           Japonica Group] gi|113564719|dbj|BAF15062.1|
           Os04g0488100 [Oryza sativa Japonica Group]
           gi|215706981|dbj|BAG93441.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|376372944|gb|AAQ75093.2| Rad21-2 protein [Oryza
           sativa Japonica Group]
          Length = 749

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 31/249 (12%)
 Frame = +3

Query: 120 SACFTPLADVLPSYMMDIDEEINKIY-KSDGGEAGGKEFREDSDHTEYCN-----NLETM 281
           SACFTP+ D+LP  M+D+  E+N    KS  G+   +E   D +    C+     + E  
Sbjct: 267 SACFTPVKDILPPEMVDMMAEVNDPSDKSTRGKKPQRELNRDENGNSACHIPLSGSKEVQ 326

Query: 282 VARNILGSTFFDMENGNHEHSESLEEIVSQTIQNNSHVNQPEIHVELVNLPETITSESHK 461
           +  NI+ +  F   + N     ++EE  + ++   +     +   E  +L +       K
Sbjct: 327 IPENIVENVTFPSRDAN---CPTIEESENGSLHGTNTNPSCDGFEEPGSLEQPTLRCKTK 383

Query: 462 DISLEGLTEDRTPTKPHDSIICDKDQGPKLMVTTPAQKERFQLLRKRKYSL--------- 614
            I+    +     T+    + C     PK MVTTPA+KE+ ++ RKR+  L         
Sbjct: 384 LINELSPSTPEPMTEGGTGLPCS----PKFMVTTPAKKEKHRVTRKRRRGLYNKDYIPTD 439

Query: 615 ----------------DETSVLTNNSLKRGIMNSSNLVCERRKLPITRLDIWKACRFANV 746
                           DE  VL N +L+  I ++S+LV +RRK P T L  WK  +  ++
Sbjct: 440 RGDKRKVRRRGTWVLYDENIVLPNETLRNTIEDASDLVQQRRKAPHTCLYTWKEGKIRSL 499

Query: 747 QEVFMEPLI 773
              FM+PLI
Sbjct: 500 PVTFMDPLI 508


>gb|EEE61227.1| hypothetical protein OsJ_15266 [Oryza sativa Japonica Group]
          Length = 739

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 21/239 (8%)
 Frame = +3

Query: 120 SACFTPLADVLPSYMMDIDEEINKIY-KSDGGEAGGKEFREDSDHTEYCN-----NLETM 281
           SACFTP+ D+LP  M+D+  E+N    KS  G+   +E   D +    C+     + E  
Sbjct: 267 SACFTPVKDILPPEMVDMMAEVNDPSDKSTRGKKPQRELNRDENGNSACHIPLSGSKEVQ 326

Query: 282 VARNILGSTFFDMENGNHEHSESLEEIVSQTIQNNSHVNQPEIHVELVNLPETITSESHK 461
           +  NI+ +  F   + N     ++EE  + ++   +     +   E  +L +       K
Sbjct: 327 IPENIVENVTFPSRDAN---CPTIEESENGSLHGTNTNPSCDGFEEPGSLEQPTLRCKTK 383

Query: 462 DISLEGLTEDRTPTKPHDSIICDKDQGPKLMVTTPAQKERFQLLRKRKYSLDETSVLTNN 641
            I+    +     T+    + C     PK MVTTPA+KE+ ++ RKR+  L     +  +
Sbjct: 384 LINELSPSTPEPMTEGGTGLPCS----PKFMVTTPAKKEKHRVTRKRRRGLYNKDYIPTD 439

Query: 642 ---------------SLKRGIMNSSNLVCERRKLPITRLDIWKACRFANVQEVFMEPLI 773
                          +L+  I ++S+LV +RRK P T L  WK  +  ++   FM+PLI
Sbjct: 440 RGDKRKIFKAQGKVLTLRNTIEDASDLVQQRRKAPHTCLYTWKEGKIRSLPVTFMDPLI 498


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