BLASTX nr result

ID: Dioscorea21_contig00017508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017508
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40351.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein R...   248   1e-63
ref|XP_002468639.1| hypothetical protein SORBIDRAFT_01g049430 [S...   243   4e-62
gb|ACG39707.1| riboflavin biosynthesis protein ribD [Zea mays]        243   4e-62
ref|NP_001130669.1| uncharacterized protein LOC100191772 [Zea ma...   243   4e-62

>emb|CBI40351.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  248 bits (632), Expect = 1e-63
 Identities = 127/250 (50%), Positives = 171/250 (68%), Gaps = 4/250 (1%)
 Frame = +1

Query: 1   PCNHYGRTPPCTEALIGAKLKRVVIGMVDPNPIVASKGVEKLRDAGMXXXXXXXXLMCRK 180
           PCNHYGRTPPCTEALI AK+K+VVIGMVDPNPIVASKGV++LRDAG+         +C+K
Sbjct: 68  PCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKGVDRLRDAGIEVTVAVEEELCKK 127

Query: 181 LNEAYIHKMLTGKPFVTLRYSLSFNGRILNHLXXXXXXXXXXXXQLLQEYDAVIISSDSL 360
           LNEAYIH+MLTGKPFVTLRYSLS NG IL+ L            QL+QEYDA+I+S  ++
Sbjct: 128 LNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGVEEAGGYYSQLVQEYDAIILSPTTV 187

Query: 361 SKMSELPTSKETRANQPLIIVIARNNTSSICLPSPTT--GTRILILSEKAITVQPK--SE 528
           ++    P S+E  ANQPL I+IA++  S   +P P T   ++++I ++    V+P+   +
Sbjct: 188 TEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPHTEATSKVIIFADNETAVEPEMVQK 247

Query: 529 EIENTVIQKLNLSSILDYCATLGLCSILFDFRADDVCFTQLLEDSFKEQLLQKVVMEISP 708
            IE  V+ ++NL+++L+YC   GLCSIL D R +   F  LL+ S +E LLQKVV+E+ P
Sbjct: 248 GIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFGYFEDLLKQSLEENLLQKVVVEVLP 307

Query: 709 AWGVTGDASM 738
            W    +  +
Sbjct: 308 FWSTNEEEGL 317


>ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
           vinifera]
          Length = 379

 Score =  248 bits (632), Expect = 1e-63
 Identities = 127/250 (50%), Positives = 171/250 (68%), Gaps = 4/250 (1%)
 Frame = +1

Query: 1   PCNHYGRTPPCTEALIGAKLKRVVIGMVDPNPIVASKGVEKLRDAGMXXXXXXXXLMCRK 180
           PCNHYGRTPPCTEALI AK+K+VVIGMVDPNPIVASKGV++LRDAG+         +C+K
Sbjct: 99  PCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKGVDRLRDAGIEVTVAVEEELCKK 158

Query: 181 LNEAYIHKMLTGKPFVTLRYSLSFNGRILNHLXXXXXXXXXXXXQLLQEYDAVIISSDSL 360
           LNEAYIH+MLTGKPFVTLRYSLS NG IL+ L            QL+QEYDA+I+S  ++
Sbjct: 159 LNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGVEEAGGYYSQLVQEYDAIILSPTTV 218

Query: 361 SKMSELPTSKETRANQPLIIVIARNNTSSICLPSPTT--GTRILILSEKAITVQPK--SE 528
           ++    P S+E  ANQPL I+IA++  S   +P P T   ++++I ++    V+P+   +
Sbjct: 219 TEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPHTEATSKVIIFADNETAVEPEMVQK 278

Query: 529 EIENTVIQKLNLSSILDYCATLGLCSILFDFRADDVCFTQLLEDSFKEQLLQKVVMEISP 708
            IE  V+ ++NL+++L+YC   GLCSIL D R +   F  LL+ S +E LLQKVV+E+ P
Sbjct: 279 GIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFGYFEDLLKQSLEENLLQKVVVEVLP 338

Query: 709 AWGVTGDASM 738
            W    +  +
Sbjct: 339 FWSTNEEEGL 348


>ref|XP_002468639.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor]
           gi|241922493|gb|EER95637.1| hypothetical protein
           SORBIDRAFT_01g049430 [Sorghum bicolor]
          Length = 396

 Score =  243 bits (619), Expect = 4e-62
 Identities = 131/257 (50%), Positives = 171/257 (66%), Gaps = 3/257 (1%)
 Frame = +1

Query: 1   PCNHYGRTPPCTEALIGAKLKRVVIGMVDPNPIVASKGVEKLRDAGMXXXXXXXXLMCRK 180
           PCNHYGRTPPCTEALI AK+K VV+GM DPNPIVASKG+EKL+ AG+         +CRK
Sbjct: 123 PCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGIEKLQGAGINVRVGVEEALCRK 182

Query: 181 LNEAYIHKMLTGKPFVTLRYSLSFNGRILNHLXXXXXXXXXXXXQLLQEYDAVIISSDSL 360
           LNEAYIH+MLTGK F TLR +LS NG + N +            QL++EYD VIISSD L
Sbjct: 183 LNEAYIHRMLTGKAFATLRATLSMNGIVTNQIGKGADQSGGYYSQLMKEYDGVIISSD-L 241

Query: 361 SKMSELPTSKETRANQPLIIVIARNNTSSICLPSPTT--GTRILILSEKAITVQPKSEEI 534
           +KMS LP S+E  ANQPL I+IA+   S + +PS +    +++++L++  +T  P   E+
Sbjct: 242 AKMSSLPLSREAGANQPLYIIIAQGENSRLHIPSLSEEHASKVIVLADSPVTAAPAGVEV 301

Query: 535 ENTVIQKLNLSSILDYCATLGLCSILFDFRADDVCFTQLLEDSFKEQLLQKVVMEISPAW 714
              V+++++L SIL   A  GLCS+L DFR     F  LL D  +++L+QKVV+EI P W
Sbjct: 302 --AVLRQIDLESILQLLAQRGLCSVLVDFREATESFASLLNDFQEDKLVQKVVVEILPFW 359

Query: 715 GVTGDASMLNF-GSQSF 762
             +   S L F GSQSF
Sbjct: 360 FASEGLSNLAFGGSQSF 376


>gb|ACG39707.1| riboflavin biosynthesis protein ribD [Zea mays]
          Length = 392

 Score =  243 bits (619), Expect = 4e-62
 Identities = 132/257 (51%), Positives = 171/257 (66%), Gaps = 3/257 (1%)
 Frame = +1

Query: 1   PCNHYGRTPPCTEALIGAKLKRVVIGMVDPNPIVASKGVEKLRDAGMXXXXXXXXLMCRK 180
           PCNHYGRTPPCTEALI AK+K VV+GM DPNPIVASKG+EKL+ AG+         +CRK
Sbjct: 119 PCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGIEKLQGAGISVRVGVEEALCRK 178

Query: 181 LNEAYIHKMLTGKPFVTLRYSLSFNGRILNHLXXXXXXXXXXXXQLLQEYDAVIISSDSL 360
           LNEAYIH+MLTGK F TLR +LS NG I N +            QL++EYD VIISSD L
Sbjct: 179 LNEAYIHRMLTGKAFATLRATLSMNGIITNQIGKGADQSGGYYSQLMKEYDGVIISSD-L 237

Query: 361 SKMSELPTSKETRANQPLIIVIARNNTSSICLPSPTT--GTRILILSEKAITVQPKSEEI 534
           +KMS LP S+E   NQPL I+IA+  +S + +PS +    +R ++L++  +TV+P   E+
Sbjct: 238 AKMSALPLSREAGTNQPLCIIIAQGESSRLHIPSLSQEHASRAIVLADSPVTVEPAGVEV 297

Query: 535 ENTVIQKLNLSSILDYCATLGLCSILFDFRADDVCFTQLLEDSFKEQLLQKVVMEISPAW 714
              V ++++L SIL   A  GLCS+L DFR     F  LL D  +++L+QKVV+E+ P W
Sbjct: 298 --AVFRQIDLESILQLLAQRGLCSVLVDFREAGESFASLLNDFQEDKLVQKVVVEVLPFW 355

Query: 715 GVTGDASMLNF-GSQSF 762
             +   S L F GSQSF
Sbjct: 356 LASDGLSNLAFGGSQSF 372


>ref|NP_001130669.1| uncharacterized protein LOC100191772 [Zea mays]
           gi|194689788|gb|ACF78978.1| unknown [Zea mays]
           gi|414864390|tpg|DAA42947.1| TPA: riboflavin
           biosynthesis protein ribD [Zea mays]
          Length = 392

 Score =  243 bits (619), Expect = 4e-62
 Identities = 132/257 (51%), Positives = 171/257 (66%), Gaps = 3/257 (1%)
 Frame = +1

Query: 1   PCNHYGRTPPCTEALIGAKLKRVVIGMVDPNPIVASKGVEKLRDAGMXXXXXXXXLMCRK 180
           PCNHYGRTPPCTEALI AK+K VV+GM DPNPIVASKG+EKL+ AG+         +CRK
Sbjct: 119 PCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGIEKLQGAGISVRVGVEEALCRK 178

Query: 181 LNEAYIHKMLTGKPFVTLRYSLSFNGRILNHLXXXXXXXXXXXXQLLQEYDAVIISSDSL 360
           LNEAYIH+MLTGK F TLR +LS NG I N +            QL++EYD VIISSD L
Sbjct: 179 LNEAYIHRMLTGKAFATLRATLSMNGIITNQIGKGADQSGGYYSQLMKEYDGVIISSD-L 237

Query: 361 SKMSELPTSKETRANQPLIIVIARNNTSSICLPSPTT--GTRILILSEKAITVQPKSEEI 534
           +KMS LP S+E   NQPL I+IA+  +S + +PS +    +R ++L++  +TV+P   E+
Sbjct: 238 AKMSALPLSREAGTNQPLCIIIAQGESSRLHIPSLSQEHASRAIVLADSPVTVEPAGVEV 297

Query: 535 ENTVIQKLNLSSILDYCATLGLCSILFDFRADDVCFTQLLEDSFKEQLLQKVVMEISPAW 714
              V ++++L SIL   A  GLCS+L DFR     F  LL D  +++L+QKVV+E+ P W
Sbjct: 298 --AVFRQIDLESILQLLAQRGLCSVLVDFREAGESFASLLNDFQEDKLVQKVVVEVLPFW 355

Query: 715 GVTGDASMLNF-GSQSF 762
             +   S L F GSQSF
Sbjct: 356 LASDGLSNLAFGGSQSF 372


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