BLASTX nr result

ID: Dioscorea21_contig00017437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017437
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putat...    85   5e-15
ref|NP_192075.1| ABC transporter 1 [Arabidopsis thaliana] gi|385...    74   1e-11
ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex...    72   4e-11
emb|CAN70923.1| hypothetical protein VITISV_018909 [Vitis vinifera]    72   4e-11
emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana]                    72   6e-11

>ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223545639|gb|EEF47143.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 620

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = +2

Query: 113 MAPFHNIRRLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRG 292
           M  F +I R+ +G+ LVA E AKRS   +AA  G+ +TL + + KKA+VS TDL+GLT+G
Sbjct: 1   MTSFKDIGRIVNGLSLVAKEVAKRSKSLDAAATGDFQTLFTSTAKKAIVSVTDLSGLTKG 60

Query: 293 RSREFSGPRAKESVVFF---SDGPETNASSSGSV 385
             REF+ P+ KESVVFF    D PE +   S S+
Sbjct: 61  NVREFTPPKPKESVVFFDHSDDVPEPSPVQSSSI 94


>ref|NP_192075.1| ABC transporter 1 [Arabidopsis thaliana] gi|3859609|gb|AAC72875.1|
           Arabidopsis thaliana ABC1 protein (GB:AJ001158)
           [Arabidopsis thaliana] gi|7268209|emb|CAB77736.1|
           putative ABC transporter [Arabidopsis thaliana]
           gi|332656658|gb|AEE82058.1| ABC transporter 1
           [Arabidopsis thaliana]
          Length = 623

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
 Frame = +2

Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316
           RL +GV LVA E   +SP  + AR G++E L++ S KKALV+ATDL GLT G+ RE S  
Sbjct: 10  RLVNGVSLVAKEIYNQSPELQRARNGDLEGLITSSGKKALVAATDLVGLTSGKLRELSIR 69

Query: 317 RAKE-SVVFFSDG---------PETNASSSGSVCEVIPSAVITNQGESLEFGKELQES 460
           R+KE SVV+F +G         PE  + ++    +++ S V+ N     EF  E++ S
Sbjct: 70  RSKEPSVVYFDEGDNKDNVVATPEVRSVNTKPSEKIVDSKVLRN-----EFSDEVKNS 122


>ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial
           [Vitis vinifera] gi|297744068|emb|CBI37038.3| unnamed
           protein product [Vitis vinifera]
          Length = 583

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/60 (58%), Positives = 49/60 (81%)
 Frame = +2

Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316
           RL +G+ L+A EA KRS V + ARAG++ETL+S ++KKA+V+ATD +GLT+G+ REFS P
Sbjct: 6   RLVNGLSLIAKEAVKRSEVLDNARAGDLETLISSAVKKAVVTATDASGLTKGKVREFSIP 65


>emb|CAN70923.1| hypothetical protein VITISV_018909 [Vitis vinifera]
          Length = 622

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/60 (58%), Positives = 49/60 (81%)
 Frame = +2

Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316
           RL +G+ L+A EA KRS V + ARAG++ETL+S ++KKA+V+ATD +GLT+G+ REFS P
Sbjct: 6   RLVNGLSLIAKEAVKRSEVLDNARAGDLETLISSAVKKAVVTATDASGLTKGKVREFSIP 65


>emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana]
          Length = 623

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
 Frame = +2

Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316
           RL +GV LVA E   +SP  + AR G++E L++ S KKALV+ATDL GLT G+ RE S  
Sbjct: 10  RLVNGVSLVAKEIYNQSPELQRARNGDLEGLITSSGKKALVAATDLVGLTSGKLRELSIR 69

Query: 317 RAKE-SVVFFSDG---------PETNASSSGSVCEVIPSAVITNQGESLEFGKELQES 460
           R+KE SVV+F +G         PE  + ++    +++ S V+ +     EF  E++ S
Sbjct: 70  RSKEPSVVYFDEGDNKDNVVATPEIRSVNTEPSEKIVDSKVLRS-----EFSDEVKNS 122


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