BLASTX nr result
ID: Dioscorea21_contig00017437
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00017437 (462 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putat... 85 5e-15 ref|NP_192075.1| ABC transporter 1 [Arabidopsis thaliana] gi|385... 74 1e-11 ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex... 72 4e-11 emb|CAN70923.1| hypothetical protein VITISV_018909 [Vitis vinifera] 72 4e-11 emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana] 72 6e-11 >ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223545639|gb|EEF47143.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] Length = 620 Score = 85.1 bits (209), Expect = 5e-15 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 3/94 (3%) Frame = +2 Query: 113 MAPFHNIRRLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRG 292 M F +I R+ +G+ LVA E AKRS +AA G+ +TL + + KKA+VS TDL+GLT+G Sbjct: 1 MTSFKDIGRIVNGLSLVAKEVAKRSKSLDAAATGDFQTLFTSTAKKAIVSVTDLSGLTKG 60 Query: 293 RSREFSGPRAKESVVFF---SDGPETNASSSGSV 385 REF+ P+ KESVVFF D PE + S S+ Sbjct: 61 NVREFTPPKPKESVVFFDHSDDVPEPSPVQSSSI 94 >ref|NP_192075.1| ABC transporter 1 [Arabidopsis thaliana] gi|3859609|gb|AAC72875.1| Arabidopsis thaliana ABC1 protein (GB:AJ001158) [Arabidopsis thaliana] gi|7268209|emb|CAB77736.1| putative ABC transporter [Arabidopsis thaliana] gi|332656658|gb|AEE82058.1| ABC transporter 1 [Arabidopsis thaliana] Length = 623 Score = 73.9 bits (180), Expect = 1e-11 Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 10/118 (8%) Frame = +2 Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316 RL +GV LVA E +SP + AR G++E L++ S KKALV+ATDL GLT G+ RE S Sbjct: 10 RLVNGVSLVAKEIYNQSPELQRARNGDLEGLITSSGKKALVAATDLVGLTSGKLRELSIR 69 Query: 317 RAKE-SVVFFSDG---------PETNASSSGSVCEVIPSAVITNQGESLEFGKELQES 460 R+KE SVV+F +G PE + ++ +++ S V+ N EF E++ S Sbjct: 70 RSKEPSVVYFDEGDNKDNVVATPEVRSVNTKPSEKIVDSKVLRN-----EFSDEVKNS 122 >ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial [Vitis vinifera] gi|297744068|emb|CBI37038.3| unnamed protein product [Vitis vinifera] Length = 583 Score = 72.4 bits (176), Expect = 4e-11 Identities = 35/60 (58%), Positives = 49/60 (81%) Frame = +2 Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316 RL +G+ L+A EA KRS V + ARAG++ETL+S ++KKA+V+ATD +GLT+G+ REFS P Sbjct: 6 RLVNGLSLIAKEAVKRSEVLDNARAGDLETLISSAVKKAVVTATDASGLTKGKVREFSIP 65 >emb|CAN70923.1| hypothetical protein VITISV_018909 [Vitis vinifera] Length = 622 Score = 72.4 bits (176), Expect = 4e-11 Identities = 35/60 (58%), Positives = 49/60 (81%) Frame = +2 Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316 RL +G+ L+A EA KRS V + ARAG++ETL+S ++KKA+V+ATD +GLT+G+ REFS P Sbjct: 6 RLVNGLSLIAKEAVKRSEVLDNARAGDLETLISSAVKKAVVTATDASGLTKGKVREFSIP 65 >emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana] Length = 623 Score = 71.6 bits (174), Expect = 6e-11 Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 10/118 (8%) Frame = +2 Query: 137 RLADGVFLVAFEAAKRSPVFEAARAGEIETLVSKSLKKALVSATDLAGLTRGRSREFSGP 316 RL +GV LVA E +SP + AR G++E L++ S KKALV+ATDL GLT G+ RE S Sbjct: 10 RLVNGVSLVAKEIYNQSPELQRARNGDLEGLITSSGKKALVAATDLVGLTSGKLRELSIR 69 Query: 317 RAKE-SVVFFSDG---------PETNASSSGSVCEVIPSAVITNQGESLEFGKELQES 460 R+KE SVV+F +G PE + ++ +++ S V+ + EF E++ S Sbjct: 70 RSKEPSVVYFDEGDNKDNVVATPEIRSVNTEPSEKIVDSKVLRS-----EFSDEVKNS 122