BLASTX nr result

ID: Dioscorea21_contig00017245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017245
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine...   101   7e-20
ref|XP_002272816.2| PREDICTED: probable LRR receptor-like serine...   101   7e-20
emb|CAN74435.1| hypothetical protein VITISV_041450 [Vitis vinifera]   101   7e-20
ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine...   100   2e-19

>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
            predicted protein [Populus trichocarpa]
          Length = 1036

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/109 (50%), Positives = 74/109 (67%)
 Frame = +1

Query: 1    KEEVGRVISVALLCTQASPALRPPMSRVVAMLLGDIEINEVSSRPGYLTDWKWNDDMSNY 180
            +EEV R+I VALLCTQ +P LRP MSRV+AML GDIE+N V+S+PGYLTDWK+ DD S Y
Sbjct: 932  EEEVNRLIGVALLCTQTAPTLRPSMSRVIAMLSGDIEVNSVTSKPGYLTDWKF-DDTSTY 990

Query: 181  ANSSSNAGTSTDISFQTHQTKPSFETENKQSCPPSPSEPIIHNLIAEGR 327
               S +A  ++D S     T+ S    N +   P+ ++PI+ + I +GR
Sbjct: 991  --MSDDATRASDTSHYNSSTRTSL-VNNPKDLSPTATDPILRDTIGQGR 1036


>ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Cucumis sativus]
            gi|449493071|ref|XP_004159184.1| PREDICTED: probable LRR
            receptor-like serine/threonine-protein kinase
            At1g56130-like [Cucumis sativus]
          Length = 1122

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/109 (51%), Positives = 75/109 (68%)
 Frame = +1

Query: 1    KEEVGRVISVALLCTQASPALRPPMSRVVAMLLGDIEINEVSSRPGYLTDWKWNDDMSNY 180
            KEEV RVI VALLCTQ SP LRP MSRVVAML GDIE+  V+S+PGYLTDWK+ +D++++
Sbjct: 1020 KEEVKRVIGVALLCTQTSPGLRPSMSRVVAMLSGDIEVATVTSKPGYLTDWKF-EDITSF 1078

Query: 181  ANSSSNAGTSTDISFQTHQTKPSFETENKQSCPPSPSEPIIHNLIAEGR 327
             ++ S     T      + +  S   + K+S P +PSEP++  L+ EGR
Sbjct: 1079 IDTPSTEEPDTG----RYASTSSSIIDTKRS-PANPSEPMLRGLLGEGR 1122


>ref|XP_002272816.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 1039

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 13/122 (10%)
 Frame = +1

Query: 1    KEEVGRVISVALLCTQASPALRPPMSRVVAMLLGDIEINEVSSRPGYLTDWKWNDDMSNY 180
            + E  RV+ VALLCTQASP LRP MSRVVAML GDIE++ V+S+P YLTDW +ND  S++
Sbjct: 918  ENEAIRVVGVALLCTQASPVLRPTMSRVVAMLAGDIEVSTVASKPSYLTDWDFNDATSSF 977

Query: 181  ------ANSSSNAGTSTDISFQTHQ--TKPSFETENKQSCPPSP-----SEPIIHNLIAE 321
                   +S+ N   S   SF +++  + P+    NK +  P+P     SEP++H +I  
Sbjct: 978  LSEDTQTSSAFNKSASNPTSFASNKSTSNPTSFASNKGTSNPTPSPVNISEPMLHGIIGA 1037

Query: 322  GR 327
            GR
Sbjct: 1038 GR 1039


>emb|CAN74435.1| hypothetical protein VITISV_041450 [Vitis vinifera]
          Length = 957

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 13/122 (10%)
 Frame = +1

Query: 1    KEEVGRVISVALLCTQASPALRPPMSRVVAMLLGDIEINEVSSRPGYLTDWKWNDDMSNY 180
            + E  RV+ VALLCTQASP LRP MSRVVAML GDIE++ V+S+P YLTDW +ND  S++
Sbjct: 836  ENEAIRVVGVALLCTQASPVLRPTMSRVVAMLAGDIEVSTVASKPSYLTDWDFNDATSSF 895

Query: 181  ------ANSSSNAGTSTDISFQTHQ--TKPSFETENKQSCPPSP-----SEPIIHNLIAE 321
                   +S+ N   S   SF +++  + P+    NK +  P+P     SEP++H +I  
Sbjct: 896  LSEDTQTSSAFNESASNPTSFASNKSTSNPTSFASNKGTSNPTPSPVNISEPMLHGIIGA 955

Query: 322  GR 327
            GR
Sbjct: 956  GR 957


>ref|XP_002272404.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 1037

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
 Frame = +1

Query: 7    EVGRVISVALLCTQASPALRPPMSRVVAMLLGDIEINEVSSRPGYLTDWKWNDDMSNYAN 186
            E  R+I VALLCTQASP LRP MSRV AML GDIE+  V+++P YLTDW + D  +++  
Sbjct: 895  EASRIIGVALLCTQASPMLRPTMSRVAAMLAGDIEVGIVTAKPSYLTDWDFKDITNSFLK 954

Query: 187  SSSNAGTSTDISFQTHQTKPSFETENKQSCPPSPSEPIIHNLIAEGR---*DMYIDDVNK 357
              S A  ++       +++    T ++   P SP+EP++H +I EGR    ++ +D +  
Sbjct: 955  EDSQASVAS-------KSRKQDNTADQMPSPVSPTEPMLHEIIGEGRYSTLELELDKLKL 1007

Query: 358  KLPPS 372
            ++P S
Sbjct: 1008 RIPAS 1012


Top