BLASTX nr result

ID: Dioscorea21_contig00017105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00017105
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043578.1| Os01g0616500 [Oryza sativa Japonica Group] g...   306   8e-81
ref|XP_003575377.1| PREDICTED: 50S ribosomal protein L22, chloro...   303   7e-80
ref|XP_003580511.1| PREDICTED: 50S ribosomal protein L22, chloro...   299   1e-78
ref|XP_002459563.1| hypothetical protein SORBIDRAFT_02g006656 [S...   292   1e-76
tpg|DAA39480.1| TPA: hypothetical protein ZEAMMB73_041355 [Zea m...   284   3e-74

>ref|NP_001043578.1| Os01g0616500 [Oryza sativa Japonica Group]
            gi|54290412|dbj|BAD61282.1| 50S ribosomal protein
            L22-like [Oryza sativa Japonica Group]
            gi|113533109|dbj|BAF05492.1| Os01g0616500 [Oryza sativa
            Japonica Group] gi|125526856|gb|EAY74970.1| hypothetical
            protein OsI_02868 [Oryza sativa Indica Group]
            gi|125571179|gb|EAZ12694.1| hypothetical protein
            OsJ_02612 [Oryza sativa Japonica Group]
            gi|215706459|dbj|BAG93315.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 278

 Score =  306 bits (783), Expect = 8e-81
 Identities = 168/265 (63%), Positives = 194/265 (73%)
 Frame = -1

Query: 1011 RCLRSALRQASSTIGRNHQASVAPYSTFTKPRPSPAGQALFQMRSYDFSVKRIPAPFHQF 832
            R L +A   A+   GR   AS +  S      P   GQ    +R+  F+ + +   FHQ 
Sbjct: 15   RRLSAAAEAAAKQDGRVFAASYSGSSGGVNA-PFGLGQYANLLRAQAFASRGVALNFHQL 73

Query: 831  RQQLGISSSRYLLAESGTDVVPISSPLMPDLGSGRKTEKKGVASKPLKVQAIKKDVRQSP 652
             +  GIS++R LLA     +VP+SSPL P LG G +T+KKG   K LKVQAIKKD++QSP
Sbjct: 74   IRNAGISTTRNLLAADDA-MVPVSSPLTPPLGDGEQTDKKGAIVKRLKVQAIKKDIKQSP 132

Query: 651  KKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTAYQVIHSARANAVHNHGLDPDRLLVDEA 472
            KKVNLVAKLVRGMRVEDALLQLQVTVKRAAKT YQVIHSARANA HNHGLDPD+L+V+EA
Sbjct: 133  KKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANAAHNHGLDPDKLIVEEA 192

Query: 471  FVGKGLYLKRLSYHAKGRSGIMVRPRCRLXXXXXXXXXXXEAKIAKLRVSNFKKLTRKER 292
            FVGKGLYLKRLSYHAKGR G+MVRPRCRL           EAKIAKLRVSN+KKLTRKE+
Sbjct: 193  FVGKGLYLKRLSYHAKGRCGVMVRPRCRLTVVVREATAEEEAKIAKLRVSNYKKLTRKEK 252

Query: 291  QLVPHQLIETTPRWGRKRKENTFAA 217
            QL+PH+LIE +PRW RKRKE   AA
Sbjct: 253  QLMPHRLIEVSPRWARKRKEEAGAA 277


>ref|XP_003575377.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like
            [Brachypodium distachyon]
          Length = 276

 Score =  303 bits (775), Expect = 7e-80
 Identities = 168/272 (61%), Positives = 196/272 (72%), Gaps = 6/272 (2%)
 Frame = -1

Query: 1017 WRRC-LRSALRQASSTIGRNHQASV--APYSTFTKPR---PSPAGQALFQMRSYDFSVKR 856
            WR   +R+ LR+  +       + V  A YS+ T      P   GQ    +R++  + + 
Sbjct: 4    WRASGVRAVLRRLGAAAAEKPDSRVFAASYSSSTSSSANAPFRLGQYTNLLRAHTSTSRG 63

Query: 855  IPAPFHQFRQQLGISSSRYLLAESGTDVVPISSPLMPDLGSGRKTEKKGVASKPLKVQAI 676
            IPA FHQ  +  GIS++R LLA     +VP SSPL P L    +T+KKG   K LKVQAI
Sbjct: 64   IPANFHQLFRNAGISTTRNLLAADDA-MVPTSSPLTPPLEDAEETDKKGAVVKRLKVQAI 122

Query: 675  KKDVRQSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTAYQVIHSARANAVHNHGLDP 496
            KKD++QSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKT YQVIHSARANA HNHGLDP
Sbjct: 123  KKDIKQSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTLYQVIHSARANAAHNHGLDP 182

Query: 495  DRLLVDEAFVGKGLYLKRLSYHAKGRSGIMVRPRCRLXXXXXXXXXXXEAKIAKLRVSNF 316
            D+L+V+EAFVGKGLYLKRLSYHAKGR G+MVRPRCRL           EAKIAKLRVSN+
Sbjct: 183  DKLIVEEAFVGKGLYLKRLSYHAKGRCGVMVRPRCRLTVVVREATAEEEAKIAKLRVSNY 242

Query: 315  KKLTRKERQLVPHQLIETTPRWGRKRKENTFA 220
            KKLTRKE+QL+PH+LIE +PRW RKRKE   A
Sbjct: 243  KKLTRKEKQLMPHRLIEVSPRWARKRKEEAGA 274


>ref|XP_003580511.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like
            [Brachypodium distachyon]
          Length = 276

 Score =  299 bits (765), Expect = 1e-78
 Identities = 165/270 (61%), Positives = 195/270 (72%), Gaps = 6/270 (2%)
 Frame = -1

Query: 1017 WRRC-LRSALRQASSTIGRNHQASV--APYSTFTKP---RPSPAGQALFQMRSYDFSVKR 856
            WR   +R+ LR+  +         V  A YS+ T      P   GQ    +R+++ + + 
Sbjct: 4    WRAAGVRAVLRRLGAAAAEKPDCRVFAARYSSSTSSCANAPFRLGQYTNLLRTHNSTSRG 63

Query: 855  IPAPFHQFRQQLGISSSRYLLAESGTDVVPISSPLMPDLGSGRKTEKKGVASKPLKVQAI 676
            IPA FHQ  +  GIS++R LLA     +VP+SSPL P LG   + +KKG   K LKVQAI
Sbjct: 64   IPANFHQLIRNAGISTTRNLLAADDA-MVPVSSPLTPPLGDAGEPDKKGAVVKRLKVQAI 122

Query: 675  KKDVRQSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTAYQVIHSARANAVHNHGLDP 496
            KKD++QSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKT YQVIHSARANA HNHGLD 
Sbjct: 123  KKDIKQSPKKVNLVAKLVRGMRVEDALLQLQVTVKRAAKTLYQVIHSARANAAHNHGLDA 182

Query: 495  DRLLVDEAFVGKGLYLKRLSYHAKGRSGIMVRPRCRLXXXXXXXXXXXEAKIAKLRVSNF 316
            ++L+V+EAFVGKGLYLKRLSYHAKGR G+MVRPRCRL           EAKIAKLRVSN+
Sbjct: 183  EKLIVEEAFVGKGLYLKRLSYHAKGRCGVMVRPRCRLTVVVREATAEEEAKIAKLRVSNY 242

Query: 315  KKLTRKERQLVPHQLIETTPRWGRKRKENT 226
            KKLTRKE+QL+PH+LIE +PRW RKRK  T
Sbjct: 243  KKLTRKEKQLMPHRLIEVSPRWARKRKVET 272


>ref|XP_002459563.1| hypothetical protein SORBIDRAFT_02g006656 [Sorghum bicolor]
           gi|241922940|gb|EER96084.1| hypothetical protein
           SORBIDRAFT_02g006656 [Sorghum bicolor]
          Length = 200

 Score =  292 bits (748), Expect = 1e-76
 Identities = 152/201 (75%), Positives = 168/201 (83%)
 Frame = -1

Query: 819 GISSSRYLLAESGTDVVPISSPLMPDLGSGRKTEKKGVASKPLKVQAIKKDVRQSPKKVN 640
           GIS++R+LLA+    +VPISSPL P LG   +T+KKG   K LKVQAIKKD++QSPKKVN
Sbjct: 1   GISTTRHLLADDA--MVPISSPLTPPLGGSEETDKKGAMVKRLKVQAIKKDIKQSPKKVN 58

Query: 639 LVAKLVRGMRVEDALLQLQVTVKRAAKTAYQVIHSARANAVHNHGLDPDRLLVDEAFVGK 460
           LVAKLVRGMRVEDALLQLQVTVKRAAKT YQVIHSARANA HNHGLDPD+L+V+EAFVGK
Sbjct: 59  LVAKLVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANAAHNHGLDPDKLIVEEAFVGK 118

Query: 459 GLYLKRLSYHAKGRSGIMVRPRCRLXXXXXXXXXXXEAKIAKLRVSNFKKLTRKERQLVP 280
           GLYLKRLSYHAKGR GIMVRPRCRL           EAKIAKLRVSN+KKLTRKERQL+P
Sbjct: 119 GLYLKRLSYHAKGRCGIMVRPRCRLTVVVREATAEEEAKIAKLRVSNYKKLTRKERQLMP 178

Query: 279 HQLIETTPRWGRKRKENTFAA 217
           H+LIE +PRW RKRK    AA
Sbjct: 179 HRLIEVSPRWARKRKAEAGAA 199


>tpg|DAA39480.1| TPA: hypothetical protein ZEAMMB73_041355 [Zea mays]
          Length = 314

 Score =  284 bits (726), Expect = 3e-74
 Identities = 147/195 (75%), Positives = 166/195 (85%)
 Frame = -1

Query: 819 GISSSRYLLAESGTDVVPISSPLMPDLGSGRKTEKKGVASKPLKVQAIKKDVRQSPKKVN 640
           GIS++R LLA+    +VPISSPL P LG   +T+KKG   K LKVQAIKKD++QSPKKVN
Sbjct: 115 GISTTRNLLADDA--MVPISSPLTPPLGDSEETDKKGAVVKRLKVQAIKKDIKQSPKKVN 172

Query: 639 LVAKLVRGMRVEDALLQLQVTVKRAAKTAYQVIHSARANAVHNHGLDPDRLLVDEAFVGK 460
           LVAKLVRGMRVEDALLQLQVTVKRAAKT YQVIHSARANA HNHGLDPD+L+V+EAFVGK
Sbjct: 173 LVAKLVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANASHNHGLDPDKLIVEEAFVGK 232

Query: 459 GLYLKRLSYHAKGRSGIMVRPRCRLXXXXXXXXXXXEAKIAKLRVSNFKKLTRKERQLVP 280
           GL+LKR+SYHA+GRSGIMVRPRCRL           EAKIAKLRVSN+KKLTRKE+QL+P
Sbjct: 233 GLFLKRVSYHARGRSGIMVRPRCRLTVVVREATAEEEAKIAKLRVSNYKKLTRKEQQLMP 292

Query: 279 HQLIETTPRWGRKRK 235
           H+LIE +PRW RKRK
Sbjct: 293 HRLIEVSPRWIRKRK 307


Top