BLASTX nr result

ID: Dioscorea21_contig00016954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016954
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    140   2e-31
emb|CBI23113.3| unnamed protein product [Vitis vinifera]              140   2e-31
gb|AFW68423.1| hypothetical protein ZEAMMB73_052095, partial [Ze...   132   8e-29
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       130   3e-28
ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protei...   129   4e-28

>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  140 bits (353), Expect = 2e-31
 Identities = 81/186 (43%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
 Frame = -2

Query: 661  ADSAEINQIILDMERCKQNFRQGLEEAEHYLMLCRKLQESLSMARQRVTAHNISEQRKKM 482
            A SAEIN++I+DMER KQ F++ + +A +YLML R L E+L + ++++  H  +++  KM
Sbjct: 608  AASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKM 667

Query: 481  KAISNIAAVARSTLRNKLQHFRESALAKKSSQNMAADNSSSHVETLEQ-SSSTYNSAGTI 305
            + +S  AAVARS L  K++  R S  A + SQ  AAD S     T  Q +++  N   T 
Sbjct: 668  REVSEAAAVARSLLHKKVRQLRSS--ATRPSQPTAADKSQHASATSNQHTAADINERPTT 725

Query: 304  QSS----KTDQPTPKTQNVIPEVGDTVNVPSLGKQAVVLKVEASKGEILVQASNMKLRLK 137
              S    K  Q +   +  +P+VGD V+V SLGK+A VL+VE+SKG+++VQA NMKL+LK
Sbjct: 726  SESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVLEVESSKGQLVVQAGNMKLKLK 785

Query: 136  LHDIQT 119
            L D++T
Sbjct: 786  LTDVET 791


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  140 bits (353), Expect = 2e-31
 Identities = 81/186 (43%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
 Frame = -2

Query: 661  ADSAEINQIILDMERCKQNFRQGLEEAEHYLMLCRKLQESLSMARQRVTAHNISEQRKKM 482
            A SAEIN++I+DMER KQ F++ + +A +YLML R L E+L + ++++  H  +++  KM
Sbjct: 624  AASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKM 683

Query: 481  KAISNIAAVARSTLRNKLQHFRESALAKKSSQNMAADNSSSHVETLEQ-SSSTYNSAGTI 305
            + +S  AAVARS L  K++  R S  A + SQ  AAD S     T  Q +++  N   T 
Sbjct: 684  REVSEAAAVARSLLHKKVRQLRSS--ATRPSQPTAADKSQHASATSNQHTAADINERPTT 741

Query: 304  QSS----KTDQPTPKTQNVIPEVGDTVNVPSLGKQAVVLKVEASKGEILVQASNMKLRLK 137
              S    K  Q +   +  +P+VGD V+V SLGK+A VL+VE+SKG+++VQA NMKL+LK
Sbjct: 742  SESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVLEVESSKGQLVVQAGNMKLKLK 801

Query: 136  LHDIQT 119
            L D++T
Sbjct: 802  LTDVET 807


>gb|AFW68423.1| hypothetical protein ZEAMMB73_052095, partial [Zea mays]
          Length = 859

 Score =  132 bits (331), Expect = 8e-29
 Identities = 68/182 (37%), Positives = 114/182 (62%), Gaps = 2/182 (1%)
 Frame = -2

Query: 652  AEINQIILDMERCKQNFRQGLEEAEHYLMLCRKLQESLSMARQRVTAHNISEQRKKMKAI 473
            AEIN +I+DMER KQ ++Q L+EA++ LM  ++L  +L +A++ +  H  +++++K + I
Sbjct: 677  AEINALIMDMERLKQEYQQHLQEAQYLLMQSKELHNNLELAQKSIVDHTSAQRKRKARVI 736

Query: 472  SNIAAVARSTLRNKLQHFRESALAKKSSQNMAADNSSSHVETLEQSSSTYNSAGTIQSSK 293
            S  A +ARS +R K Q F+ESA+A++  +   A N +      +   +  ++ G IQ+  
Sbjct: 737  SEYAVMARSIIRKKFQQFQESAIAERVKEEENAVNDAKSDRVKDPMPANTSAIGNIQNID 796

Query: 292  TD--QPTPKTQNVIPEVGDTVNVPSLGKQAVVLKVEASKGEILVQASNMKLRLKLHDIQT 119
            T         ++ +PEVGD+V VP L  +A V+K+++SK E+ VQA  MKL+LKL D++ 
Sbjct: 797  TSLGMTANDDEDEVPEVGDSVYVPKLKNEATVVKIDSSKNEVQVQAGMMKLKLKLKDVKV 856

Query: 118  LK 113
             K
Sbjct: 857  QK 858


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  130 bits (326), Expect = 3e-28
 Identities = 80/187 (42%), Positives = 116/187 (62%), Gaps = 9/187 (4%)
 Frame = -2

Query: 655  SAEINQIILDMERCKQNFRQGLEEAEHYLMLCRKLQESLSMARQRVTAHNISEQRKKMKA 476
            SAEI+++I DMER KQ +++ L+EA HYL   R L  SL   R+++  ++ + + KKM+ 
Sbjct: 610  SAEIDEVITDMERLKQEYQELLDEARHYLRHSRGLYNSLLNTRRKIIEYSTNLRFKKMRD 669

Query: 475  ISNIAAVARSTLRNKLQHFRESALAKK------SSQNMAADNSSSHVETLEQSSSTYNSA 314
            +S  AA+ARS L  K++    SA          SS N++A N S  V   ++ +    SA
Sbjct: 670  VSEAAAMARSILHKKVRELDASAKQPSQNNKTISSSNLSATNKSQTVAENKEPTIADKSA 729

Query: 313  GTIQ---SSKTDQPTPKTQNVIPEVGDTVNVPSLGKQAVVLKVEASKGEILVQASNMKLR 143
             +++    S++D+  P      P+VGD V+V SLGKQ  VLKV++SKGEI+VQA NMKL+
Sbjct: 730  SSVKVFNRSRSDKSGP------PKVGDMVHVSSLGKQVTVLKVDSSKGEIVVQAGNMKLK 783

Query: 142  LKLHDIQ 122
            LKL DIQ
Sbjct: 784  LKLTDIQ 790


>ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium
            distachyon]
          Length = 833

 Score =  129 bits (325), Expect = 4e-28
 Identities = 71/184 (38%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
 Frame = -2

Query: 652  AEINQIILDMERCKQNFRQGLEEAEHYLMLCRKLQESLSMARQRVTAHNISEQRKKMKAI 473
            AEIN +I+DME+ KQ + + L++A+HYLM  R+L  +L +A++ V  H I+++++K + +
Sbjct: 647  AEINALIMDMEKFKQEYDEQLQQAQHYLMQSRELHNNLEVAQKNVMDHTIAQRKRKSRVV 706

Query: 472  SNIAAVARSTLRNKLQHFRESALAKK--SSQNMAADNSSSHVETLEQSSSTYNSAGTIQS 299
            S  A +ARS +  K Q FRESA+A++    +       S  V+  E SS++        +
Sbjct: 707  SEYAVMARSIIHKKFQQFRESAIAQRVLEEERAVEKAKSERVKGPEPSSTSAIKMAQNTN 766

Query: 298  SKTDQPTPKTQNVIPEVGDTVNVPSLGKQAVVLKVEASKGEILVQASNMKLRLKLHDIQT 119
            S            IPEVGD V VP L  QA V+K+++SK E+ +QA  MKL+LKL D+  
Sbjct: 767  SSMATEANDEDGGIPEVGDLVYVPKLKNQATVVKIDSSKNEVQIQAGMMKLKLKLKDVVI 826

Query: 118  LKLR 107
             K R
Sbjct: 827  QKRR 830


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