BLASTX nr result

ID: Dioscorea21_contig00016939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016939
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago ...   151   6e-35
gb|AFK44328.1| unknown [Lotus japonicus]                              145   4e-33
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|ABN05900.1| Ubiquitin [Medicago truncatula]                        130   9e-29
ref|XP_003612660.1| hypothetical protein MTR_5g027490 [Medicago ...   129   3e-28

>ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago truncatula]
           gi|355515367|gb|AES96990.1| hypothetical protein
           MTR_5g043940 [Medicago truncatula]
          Length = 714

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/161 (45%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
 Frame = -3

Query: 471 IFLNELNQPIGPDDRTLSEFSSFLGTLARNSQLAPLTVTNWR------KMHTKESLWEYV 310
           I LNE  QPIGPD++ ++E SSFLGT+AR++ L PLT  NW+      K    + +WEYV
Sbjct: 367 IMLNEEGQPIGPDEKRVAELSSFLGTVARSADLCPLTFNNWKALVKTWKDEVIDPVWEYV 426

Query: 309 QKKYIVPQEGKKWVLATIGDDWRVYKCRVKKEHYYKYKTDKLRIMNRPQHIGEDKFKELL 130
            +KYI+P++GKK V A + D WR YK  +KK H+ KYKT   R+ NRP+ + E+ FK+LL
Sbjct: 427 NEKYIIPEKGKKDVFAIVSDAWRRYKYLIKKNHFTKYKTMHERLKNRPEEVPEEDFKKLL 486

Query: 129 NYWNSTNAKRITEVNVNNRKRQINMHTAGKKSFARIRKQMQ 7
            YW   N++ ++  N  N  +    H  G K+FA IR++M+
Sbjct: 487 VYWRDRNSQEVSLQNAQNIAQLKWRHRTGNKAFAVIREKMR 527


>gb|AFK44328.1| unknown [Lotus japonicus]
          Length = 287

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/155 (43%), Positives = 99/155 (63%)
 Frame = -3

Query: 471 IFLNELNQPIGPDDRTLSEFSSFLGTLARNSQLAPLTVTNWRKMHTKESLWEYVQKKYIV 292
           I LN   +P+GP+ + +SE SSFLGT+AR++ L PLT TNW+ +  K  +W++V  KY +
Sbjct: 70  IILNVEGEPVGPNQKIVSELSSFLGTIARSADLCPLTYTNWKAIPDKSHIWQFVNSKYDI 129

Query: 291 PQEGKKWVLATIGDDWRVYKCRVKKEHYYKYKTDKLRIMNRPQHIGEDKFKELLNYWNST 112
           P++GKK + A I D WR  KC +KK H+ KYK  + R+ NRP+ + E  F+EL++YW   
Sbjct: 130 PEKGKKAMFAIIRDAWRRQKCSIKKNHFSKYKNMRDRLKNRPEDVPEAHFRELIDYWRLE 189

Query: 111 NAKRITEVNVNNRKRQINMHTAGKKSFARIRKQMQ 7
             K I+  N  N  +Q   H  G  SFA IR++++
Sbjct: 190 AIKEISTKNARNIAQQKWRHRVGPISFACIRERLR 224


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/153 (42%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
 Frame = -3

Query: 465 LNELNQPIGPDDRTLSEFSSFLGTLARNSQLAPLTVTNWRKM--HTKESLWEYVQKKYIV 292
           +N L QP+GP+    S+ S+FLGT+ARN ++APLT  +W  M    KE++W++VQ K+ +
Sbjct: 14  INTLGQPVGPE---ASKLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQTKFDI 70

Query: 291 PQEGKKWVLATIGDDWRVYKCRVKKEHYYKYKTDKLRIMNRPQHIGEDKFKELLNYWNST 112
               K WVL ++   WR +K ++K EHYY +KTD+ R+ +R + +  +++  L++YWNS 
Sbjct: 71  EPVCKTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSE 130

Query: 111 NAKRITEVNVNNRKRQINMHTAGKKSFARIRKQ 13
            A+  +  N  NR  Q + HTAG KSFARIR++
Sbjct: 131 EAQLRSAKNKANRSNQKSTHTAGSKSFARIREE 163


>gb|ABN05900.1| Ubiquitin [Medicago truncatula]
          Length = 674

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
 Frame = -3

Query: 471 IFLNELNQPIGPDDRTLSEFSSFLGTLARNSQLAPLTVTNWRKM-HTKESLWEYVQKKYI 295
           I LNE  + I P  + +S+FS+FLG++AR S L PLT TNW+ +   K+++W YV K+YI
Sbjct: 230 ITLNEEGEAIVPSQKIVSKFSNFLGSVARMSDLCPLTYTNWKAIPKKKKTIWAYVNKRYI 289

Query: 294 VPQEGKKWVLATIGDDWRVYKCRVKKEHYYKYKTDKLRIMNRPQHIGEDKFKELLNYWNS 115
           V ++G+K V A I D WR YK  +KK H+ KY+    R+ NRP  I E  FK+L+ YW+ 
Sbjct: 290 VLEKGQKDVYAIINDAWRWYKWLIKKNHFTKYRNLCERLKNRPDSIPEAHFKKLMTYWSY 349

Query: 114 TNAKRITEVNVNNRKRQINMHTAGKKSFARIRKQMQ 7
              + I+  N  N  +Q   H AG  SFA IR++++
Sbjct: 350 EAIREISHQNAKNIDKQKWRHQAGPISFAVIRERLR 385


>ref|XP_003612660.1| hypothetical protein MTR_5g027490 [Medicago truncatula]
           gi|355513995|gb|AES95618.1| hypothetical protein
           MTR_5g027490 [Medicago truncatula]
          Length = 244

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = -3

Query: 465 LNELNQPIGPDDRTLSEFSSFLGTLARNSQLAPLTVTNWRKM-HTKESLWEYVQKKYIVP 289
           +NE  + IGP  + +S+F +FLG++AR S L PLT TNW+ +   K+++W YV K+YIVP
Sbjct: 79  VNEEGEAIGPSQKIVSKFINFLGSVARMSDLCPLTYTNWKAIPKKKKTIWAYVNKRYIVP 138

Query: 288 QEGKKWVLATIGDDWRVYKCRVKKEHYYKYKTDKLRIMNRPQHIGEDKFKELLNYWNSTN 109
           ++G+K V A I D WR YK  +KK H+ KY+  + R+ NRP  I E  FK+L+ YW    
Sbjct: 139 EKGQKDVYAIINDAWRRYKWLIKKNHFTKYRNLRERLKNRPDGILEAHFKKLMTYWRYEA 198

Query: 108 AKRITEVNVNNRKRQINMHTAGKKSF 31
            + I+  N  N  +Q   H AG  SF
Sbjct: 199 IREISHQNAKNIDKQKWRHRAGSISF 224


Top