BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016934
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001150575.1| transcription elongation factor SPT4 [Zea ma...   223   2e-56
ref|XP_003562692.1| PREDICTED: transcription elongation factor S...   223   3e-56
dbj|BAC10848.1| unknown protein [Oryza sativa Japonica Group] gi...   221   1e-55
dbj|BAK07669.1| predicted protein [Hordeum vulgare subsp. vulgare]    220   1e-55
ref|XP_002463206.1| hypothetical protein SORBIDRAFT_02g039750 [S...   218   6e-55

>ref|NP_001150575.1| transcription elongation factor SPT4 [Zea mays]
           gi|195640310|gb|ACG39623.1| transcription elongation
           factor SPT4 [Zea mays] gi|414590937|tpg|DAA41508.1| TPA:
           transcription elongation factor SPT4 [Zea mays]
          Length = 129

 Score =  223 bits (568), Expect = 2e-56
 Identities = 103/130 (79%), Positives = 113/130 (86%)
 Frame = -3

Query: 540 MAGGKRSEYMPSEDDRASSFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLDMD 361
           M GG     M  +D+     A+IPTSFG ELRACLRCRLVKTYDQFRE+GCENCPFL+MD
Sbjct: 1   MRGGGGGGMM--DDEERVGHAEIPTSFGPELRACLRCRLVKTYDQFRENGCENCPFLEMD 58

Query: 360 KEHDNVVNCTTPNFTGIISVMDPTRSWSARWLRIGRFIPGCYTLAVSEELPEEYQALCAD 181
           +EHDNVVNCTTPNFTGIIS+MDP+RSW+ARWLRIGRFIPGCYTLAVSEELPEEYQ +C D
Sbjct: 59  REHDNVVNCTTPNFTGIISLMDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQD 118

Query: 180 NNVHYVPPKR 151
           NNV YVPPKR
Sbjct: 119 NNVQYVPPKR 128


>ref|XP_003562692.1| PREDICTED: transcription elongation factor SPT4 homolog 1-like
           [Brachypodium distachyon]
          Length = 131

 Score =  223 bits (567), Expect = 3e-56
 Identities = 107/135 (79%), Positives = 116/135 (85%)
 Frame = -3

Query: 555 RRGGSMAGGKRSEYMPSEDDRASSFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP 376
           RRGG   GG R   M  EDDR    A+IPTSFGHELRACLRCRLVKT+DQFRE+GCENCP
Sbjct: 2   RRGGGGGGGGR---MMDEDDRVEH-AEIPTSFGHELRACLRCRLVKTFDQFRENGCENCP 57

Query: 375 FLDMDKEHDNVVNCTTPNFTGIISVMDPTRSWSARWLRIGRFIPGCYTLAVSEELPEEYQ 196
           FL+MDKE DNV NCTT NFTGIIS+MDP+RSW+ARWLRI +FIPGCYTLAVSEELPEEYQ
Sbjct: 58  FLEMDKE-DNVPNCTTANFTGIISLMDPSRSWAARWLRIAKFIPGCYTLAVSEELPEEYQ 116

Query: 195 ALCADNNVHYVPPKR 151
            +C DNNVHYVPPKR
Sbjct: 117 GICQDNNVHYVPPKR 131


>dbj|BAC10848.1| unknown protein [Oryza sativa Japonica Group]
           gi|218200050|gb|EEC82477.1| hypothetical protein
           OsI_26922 [Oryza sativa Indica Group]
           gi|222637486|gb|EEE67618.1| hypothetical protein
           OsJ_25179 [Oryza sativa Japonica Group]
          Length = 131

 Score =  221 bits (562), Expect = 1e-55
 Identities = 102/134 (76%), Positives = 111/134 (82%)
 Frame = -3

Query: 552 RGGSMAGGKRSEYMPSEDDRASSFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPF 373
           RGG   GG          D    +AQIPTSFGHELRACLRCRLVKTYDQF E GCENCPF
Sbjct: 2   RGGGGGGGGDGMM-----DDGPKYAQIPTSFGHELRACLRCRLVKTYDQFMEQGCENCPF 56

Query: 372 LDMDKEHDNVVNCTTPNFTGIISVMDPTRSWSARWLRIGRFIPGCYTLAVSEELPEEYQA 193
           LDM+++HDNVVNCTTPNFTGIISVMDP RSW+ARWLRIG+FIPGCYTLAV+EELPEEYQ+
Sbjct: 57  LDMERDHDNVVNCTTPNFTGIISVMDPGRSWAARWLRIGKFIPGCYTLAVAEELPEEYQS 116

Query: 192 LCADNNVHYVPPKR 151
           +C DNNV Y PPKR
Sbjct: 117 VCQDNNVQYFPPKR 130


>dbj|BAK07669.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 127

 Score =  220 bits (561), Expect = 1e-55
 Identities = 99/118 (83%), Positives = 106/118 (89%)
 Frame = -3

Query: 504 EDDRASSFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLDMDKEHDNVVNCTTP 325
           +DD     AQIP SFGHELRACLRCRLVKTYDQFRE+GCENCPFLDMDK+ DNVV+CTT 
Sbjct: 9   DDDERVGHAQIPNSFGHELRACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTA 68

Query: 324 NFTGIISVMDPTRSWSARWLRIGRFIPGCYTLAVSEELPEEYQALCADNNVHYVPPKR 151
           NFTGIIS+MDPTRSW+ARWLRIGRFIPGCYTLAVSEELPEEYQ +C DNNV Y PPKR
Sbjct: 69  NFTGIISLMDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKR 126


>ref|XP_002463206.1| hypothetical protein SORBIDRAFT_02g039750 [Sorghum bicolor]
           gi|241926583|gb|EER99727.1| hypothetical protein
           SORBIDRAFT_02g039750 [Sorghum bicolor]
          Length = 128

 Score =  218 bits (556), Expect = 6e-55
 Identities = 96/118 (81%), Positives = 109/118 (92%)
 Frame = -3

Query: 504 EDDRASSFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLDMDKEHDNVVNCTTP 325
           +D+     A+IPTSFG ELRACLRCRLVKTYDQFR++GCENCPFL+M++EHDNVVNCTTP
Sbjct: 10  DDEERVGHAEIPTSFGPELRACLRCRLVKTYDQFRQNGCENCPFLEMEREHDNVVNCTTP 69

Query: 324 NFTGIISVMDPTRSWSARWLRIGRFIPGCYTLAVSEELPEEYQALCADNNVHYVPPKR 151
           NFTGIIS+MDP+RSW+ARWLRIGRFIPGCYTLAVSEELPEEYQ +C +NNV YVPPKR
Sbjct: 70  NFTGIISLMDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQENNVQYVPPKR 127