BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016918
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I sub...   125   7e-27
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]    124   1e-26
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory...   123   2e-26
ref|XP_001765111.1| predicted protein [Physcomitrella patens sub...   110   2e-22
gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japo...   107   1e-21

>ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
           [Brachypodium distachyon]
          Length = 125

 Score =  125 bits (313), Expect = 7e-27
 Identities = 58/102 (56%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = -1

Query: 482 SARVSSCETCGFKRNAREIIGREIRYSITAEDIIRELNMEPILSRETDRESEK-VNRAVV 306
           S R +SC  CGFKR A+ I G+E RY++T EDI REL +EP ++ E+  + +  V R VV
Sbjct: 23  SVRSASCPLCGFKRKAKAIEGKETRYAVTDEDIRRELKIEPFVTLESAPKMDVIVQRVVV 82

Query: 305 NERCPQCNHPQLEYYTKQLRSADEGQTIFYECPSCFYKFSQN 180
           +E CP+C HPQLEY+TKQLR+ADEGQT+FYECP C + F  N
Sbjct: 83  DETCPKCGHPQLEYHTKQLRAADEGQTVFYECPECRHNFKVN 124


>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 125

 Score =  124 bits (312), Expect = 1e-26
 Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -1

Query: 482 SARVSSCETCGFKRNAREIIGREIRYSITAEDIIRELNMEPILSRETDRESE-KVNRAVV 306
           S R +SC  CGFKR A++I G+E RY++TAEDI REL ++P +  E+    +  V R++ 
Sbjct: 23  SHRYASCPLCGFKRKAKDIEGKETRYAVTAEDIRRELKIKPFVVLESAPNLDIVVQRSLT 82

Query: 305 NERCPQCNHPQLEYYTKQLRSADEGQTIFYECPSCFYKFSQNT 177
              CP+CNH +LEYYTKQLRSADEGQTIFYECP C + F++NT
Sbjct: 83  ERACPKCNHHELEYYTKQLRSADEGQTIFYECPECGHAFNENT 125


>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
           gi|108710721|gb|ABF98516.1| Transcription factor S-II
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 126

 Score =  123 bits (309), Expect = 2e-26
 Identities = 56/103 (54%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
 Frame = -1

Query: 482 SARVSSCETCGFKRNAREIIGREIRYSITAEDIIRELNMEPILSRETDRESEKV--NRAV 309
           S R +SC  CGFKR A++I G+E RY++TAEDI REL ++P +  ET  + E V   RA 
Sbjct: 23  SVRSASCPLCGFKRKAKDIEGKETRYTVTAEDIRRELKLDPYVILETTLKEEDVIVERAT 82

Query: 308 VNERCPQCNHPQLEYYTKQLRSADEGQTIFYECPSCFYKFSQN 180
           VN+ C +C +P+L+YYTKQLRSADEGQT+FY+C +C ++F++N
Sbjct: 83  VNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 125


>ref|XP_001765111.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683698|gb|EDQ70106.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 130

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
 Frame = -1

Query: 482 SARVSSCETCGFKRNAREIIGREIRYSITAEDIIRELNMEPILSRETD----RESEKVN- 318
           SA  +SC  C  +R+ ++  G+EI Y  T +D +R L ++ ++  E      +ES+++  
Sbjct: 24  SASFASCLLCHNQRSVQDFQGKEIWYRSTPQDFMRRLGVDLLIQPEETQVKAKESDEMQQ 83

Query: 317 RAVVNERCPQCNHPQLEYYTKQLRSADEGQTIFYECPSCFYKFSQN 180
           RAVVN+ CP+C +P LEYYTKQLRSADEGQT+FYECP C +KFSQN
Sbjct: 84  RAVVNDECPRCKNPSLEYYTKQLRSADEGQTVFYECPKCHHKFSQN 129


>gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japonica Group]
           gi|218193626|gb|EEC76053.1| hypothetical protein
           OsI_13248 [Oryza sativa Indica Group]
          Length = 156

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 32/133 (24%)
 Frame = -1

Query: 482 SARVSSCETCGFKRNAR------------------------------EIIGREIRYSITA 393
           S R +SC  CGFKR A+                              +I G+E RY++TA
Sbjct: 23  SVRSASCPLCGFKRKAKGRRLPHLSPCKALGCVLLAADAFVLFFYGADIEGKETRYTVTA 82

Query: 392 EDIIRELNMEPILSRETDRESEKV--NRAVVNERCPQCNHPQLEYYTKQLRSADEGQTIF 219
           EDI REL ++P +  ET  + E V   RA VN+ C +C +P+L+YYTKQLRSADEGQT+F
Sbjct: 83  EDIRRELKLDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVF 142

Query: 218 YECPSCFYKFSQN 180
           Y+C +C ++F++N
Sbjct: 143 YKCANCRHEFNEN 155