BLASTX nr result

ID: Dioscorea21_contig00016915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016915
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG37285.1| alpha-tubulin 3 [Salix arbutifolia]                    142   4e-32
ref|XP_002298794.1| tubulin alpha-3 chain [Populus trichocarpa] ...   142   4e-32
gb|ABQ59633.1| alpha-tubulin 3 [Populus tremuloides]                  142   4e-32
gb|AGG37289.1| alpha-tubulin 7 [Salix arbutifolia]                    140   8e-32
gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]                    140   8e-32

>gb|AGG37285.1| alpha-tubulin 3 [Salix arbutifolia]
          Length = 451

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = -1

Query: 212 GDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 33
           GDLAKVQRAVCMISNSTSVA+VFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL
Sbjct: 366 GDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425

Query: 32  AALEKDYEEV 3
           AALEKDYEEV
Sbjct: 426 AALEKDYEEV 435


>ref|XP_002298794.1| tubulin alpha-3 chain [Populus trichocarpa]
           gi|118481133|gb|ABK92520.1| unknown [Populus
           trichocarpa] gi|222846052|gb|EEE83599.1| tubulin alpha-3
           chain [Populus trichocarpa]
          Length = 451

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = -1

Query: 212 GDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 33
           GDLAKVQRAVCMISNSTSVA+VFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL
Sbjct: 366 GDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425

Query: 32  AALEKDYEEV 3
           AALEKDYEEV
Sbjct: 426 AALEKDYEEV 435


>gb|ABQ59633.1| alpha-tubulin 3 [Populus tremuloides]
          Length = 451

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = -1

Query: 212 GDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 33
           GDLAKVQRAVCMISNSTSVA+VFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL
Sbjct: 366 GDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425

Query: 32  AALEKDYEEV 3
           AALEKDYEEV
Sbjct: 426 AALEKDYEEV 435


>gb|AGG37289.1| alpha-tubulin 7 [Salix arbutifolia]
          Length = 450

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = -1

Query: 212 GDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 33
           GDLAKVQRAVCMISNSTSVA+VFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL
Sbjct: 366 GDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425

Query: 32  AALEKDYEEV 3
           AALEKDYEEV
Sbjct: 426 AALEKDYEEV 435


>gb|AGG37283.1| alpha-tubulin 1 [Salix arbutifolia]
          Length = 451

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = -1

Query: 212 GDLAKVQRAVCMISNSTSVADVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 33
           GDLAKVQRAVCMISNSTSVA+VFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL
Sbjct: 366 GDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425

Query: 32  AALEKDYEEV 3
           AALEKDYEEV
Sbjct: 426 AALEKDYEEV 435


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