BLASTX nr result

ID: Dioscorea21_contig00016868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016868
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP80862.1| Emr1 [Triticum aestivum]                                66   3e-09
gb|AFK13848.1| suppressor of gene silencing 3 [Beta vulgaris sub...    62   4e-08
ref|NP_001105989.1| protein SUPPRESSOR OF GENE SILENCING 3 homol...    60   2e-07
tpg|DAA55462.1| TPA: hypothetical protein ZEAMMB73_109494 [Zea m...    58   9e-07
ref|XP_003578798.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...    56   3e-06

>gb|AAP80862.1| Emr1 [Triticum aestivum]
          Length = 304

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/52 (59%), Positives = 43/52 (82%)
 Frame = -3

Query: 218 REKLIRAHKDKKVELKKKQMMQEVELEKDFDSALTKLMQKFTPIEFQVSGSS 63
           R+++I+AH++KKV+LKK+ M +EVELEK+FD+ALT LM+K  P  FQ S SS
Sbjct: 252 RDEMIKAHEEKKVQLKKEYMAKEVELEKEFDAALTGLMEKHRPGTFQASSSS 303


>gb|AFK13848.1| suppressor of gene silencing 3 [Beta vulgaris subsp. vulgaris]
          Length = 603

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = -3

Query: 218 REKLIRAHKDKKVELKKKQMMQEVELEKDFDSALTKLMQKFTP 90
           RE+LI+ HKDKK+E+KK+   +E+ELEK+FD+ LTKLMQK+ P
Sbjct: 548 REQLIQIHKDKKMEMKKRHWEEELELEKEFDATLTKLMQKYAP 590


>ref|NP_001105989.1| protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays]
           gi|189046706|sp|A1Y2B7.1|SGS3_MAIZE RecName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog;
           AltName: Full=Protein LEAFBLADELESS 1; AltName:
           Full=ZmSGS3 gi|111559385|gb|ABH10613.1| leafbladeless1
           [Zea mays] gi|224028437|gb|ACN33294.1| unknown [Zea
           mays] gi|413941957|gb|AFW74606.1| ragged seedling1 [Zea
           mays]
          Length = 594

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = -3

Query: 218 REKLIRAHKDKKVELKKKQMMQEVELEKDFDSALTKLMQKFTPIEFQVSGS 66
           R++LI+ H+DKK++LKK+ M  E+ELEK+FD+ALT LM+K  P  F+ S S
Sbjct: 544 RDELIKVHEDKKLKLKKEYMDLELELEKEFDAALTGLMEKHKPDTFEASSS 594


>tpg|DAA55462.1| TPA: hypothetical protein ZEAMMB73_109494 [Zea mays]
          Length = 126

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = -3

Query: 218 REKLIRAHKDKKVELKKKQMMQEVELEKDFDSALTKLMQKFTPIEFQVSGS 66
           R++LI+ H++KK++LKK+ M +E+ELE+D D+ALT LM+K  P  F+ S S
Sbjct: 76  RDELIKGHEEKKMKLKKQYMEKELELERDHDAALTALMEKHKPDTFEASSS 126


>ref|XP_003578798.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 homolog
           [Brachypodium distachyon]
          Length = 610

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/46 (54%), Positives = 38/46 (82%)
 Frame = -3

Query: 218 REKLIRAHKDKKVELKKKQMMQEVELEKDFDSALTKLMQKFTPIEF 81
           R++LI+AH++KKV+LKK+ M +E+ELEK+ D+A+T LM+K  P  F
Sbjct: 546 RDELIKAHEEKKVKLKKEYMAKELELEKELDAAVTSLMEKHKPGTF 591


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