BLASTX nr result

ID: Dioscorea21_contig00016851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016851
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O22647.1|RS16_FRIAG RecName: Full=40S ribosomal protein S16 g...   124   8e-27
gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ044...   124   1e-26
gb|ABK22408.1| unknown [Picea sitchensis]                             124   1e-26
gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK222...   123   1e-26
ref|XP_003518703.1| PREDICTED: 40S ribosomal protein S16-like [G...   122   2e-26

>sp|O22647.1|RS16_FRIAG RecName: Full=40S ribosomal protein S16 gi|2641209|gb|AAB86856.1|
           ribosomal protein S16 [Fritillaria agrestis]
          Length = 145

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/67 (91%), Positives = 63/67 (94%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           ESVQCFGRKKTAVAVT+CKRGRGLI+VNG PIELVKPEILRYKAFEPILLLGR RF  VD
Sbjct: 7   ESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVD 66

Query: 186 MRIRVRG 206
           MRIRVRG
Sbjct: 67  MRIRVRG 73


>gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ04416.1| putative
           ribosomal S16 [Picea wilsonii]
          Length = 143

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           +SVQCFGRKKTAVAVTYCKRGRGLI++NG PIEL++PEILRYKAFEPILLLGR RFA VD
Sbjct: 5   DSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRQRFAGVD 64

Query: 186 MRIRVRG 206
           MRIRV+G
Sbjct: 65  MRIRVKG 71


>gb|ABK22408.1| unknown [Picea sitchensis]
          Length = 151

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           +SVQCFGRKKTAVAVTYCKRGRGLI++NG PIEL++PEILRYKAFEPILLLGR RFA VD
Sbjct: 5   DSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRQRFAGVD 64

Query: 186 MRIRVRG 206
           MRIRV+G
Sbjct: 65  MRIRVKG 71


>gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK22272.1| unknown
           [Picea sitchensis] gi|224285075|gb|ACN40265.1| unknown
           [Picea sitchensis]
          Length = 143

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           +SVQCFGRKKTAVAVTYCKRGRGLI++NG PIEL++PEILRYKAFEPILLLGR RFA VD
Sbjct: 5   DSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRHRFAGVD 64

Query: 186 MRIRVRG 206
           MRIRV+G
Sbjct: 65  MRIRVKG 71


>ref|XP_003518703.1| PREDICTED: 40S ribosomal protein S16-like [Glycine max]
          Length = 156

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +3

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIRVNGVPIELVKPEILRYKAFEPILLLGRSRFASVD 185
           E VQCFGRKKTAVAVTYCKRGRGLI++NG PIELV+PEILR+KAFEPILLLG+SRFA VD
Sbjct: 18  EQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVD 77

Query: 186 MRIRVRG 206
           MRIRV+G
Sbjct: 78  MRIRVKG 84


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