BLASTX nr result
ID: Dioscorea21_contig00016849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00016849
(736 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW74566.1| integrase [Boechera divaricarpa] 113 5e-44
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 108 9e-43
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 110 1e-42
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 104 4e-42
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 104 1e-37
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 113 bits (282), Expect(2) = 5e-44
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = +2
Query: 5 RADESRYRSIVGSLLYLSHTRPELMFAVSLISKFVQKPTKHHFGAMKRILHYIAATLNMG 184
+AD +++RS+VG L+YL+HTRP++ FAVS IS+F+ PTK HFGA KR+L YIA T G
Sbjct: 933 KADATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYG 992
Query: 185 LKYESVEDFHLQGYVDSDWGGSIEDRRSTT 274
L Y SV F L G+ DSDW G ++DR+ST+
Sbjct: 993 LWYCSVSKFKLVGFTDSDWAGCVQDRKSTS 1022
Score = 91.3 bits (225), Expect(2) = 5e-44
Identities = 48/120 (40%), Positives = 68/120 (56%)
Frame = +1
Query: 373 DRRSTTGWVFHLGSGAIAWTSKRQEIIALSSTEVEYVAATSAACXXXXXXXXXXXXXXXX 552
DR+ST+G VF+LGSGA+ W+SK+Q + ALSS+E EY AAT+AAC
Sbjct: 1017 DRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAAC---------------- 1060
Query: 553 XXXXXXXXXXXXXXXXXXXXXADMEVPQTRATILHCDSLSAIAIARNPAHHGRTKHIDVR 732
AD++ Q +AT + CD+ + IA+ +NPA+HGRTKHI ++
Sbjct: 1061 ------------QAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTKHISIK 1108
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 108 bits (271), Expect(2) = 9e-43
Identities = 49/90 (54%), Positives = 66/90 (73%)
Frame = +2
Query: 5 RADESRYRSIVGSLLYLSHTRPELMFAVSLISKFVQKPTKHHFGAMKRILHYIAATLNMG 184
RAD R+RS+VG L+YL+HTRP+ FAV +IS+F+ P+K H GA KR+L YIA T +
Sbjct: 951 RADARRFRSLVGGLIYLTHTRPDXAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFR 1010
Query: 185 LKYESVEDFHLQGYVDSDWGGSIEDRRSTT 274
+ Y V++F L GY DSDW G +EDR+ST+
Sbjct: 1011 IWYGHVQEFKLVGYTDSDWAGCLEDRKSTS 1040
Score = 91.3 bits (225), Expect(2) = 9e-43
Identities = 45/120 (37%), Positives = 67/120 (55%)
Frame = +1
Query: 373 DRRSTTGWVFHLGSGAIAWTSKRQEIIALSSTEVEYVAATSAACXXXXXXXXXXXXXXXX 552
DR+ST+G++F LGSGA+ W+SK+Q + ALSS+E EY AATS+AC
Sbjct: 1035 DRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSAC---------------- 1078
Query: 553 XXXXXXXXXXXXXXXXXXXXXADMEVPQTRATILHCDSLSAIAIARNPAHHGRTKHIDVR 732
D+ T+++CD+ +AIA+ +NPA+HGRTKH+++R
Sbjct: 1079 ------------QAVWLRRILVDINQEHEEXTVIYCDNKAAIAMTKNPAYHGRTKHVBIR 1126
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 110 bits (276), Expect(2) = 1e-42
Identities = 49/88 (55%), Positives = 66/88 (75%)
Frame = +2
Query: 5 RADESRYRSIVGSLLYLSHTRPELMFAVSLISKFVQKPTKHHFGAMKRILHYIAATLNMG 184
RAD R+RS+VG L+YL+HTRP++ FAV +IS+F+ P+K H GA KR+L YIA T + G
Sbjct: 1042 RADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFG 1101
Query: 185 LKYESVEDFHLQGYVDSDWGGSIEDRRS 268
+ Y V++F L GY DSDW G +EDR+S
Sbjct: 1102 IWYGHVQEFKLVGYTDSDWAGCLEDRKS 1129
Score = 88.6 bits (218), Expect(2) = 1e-42
Identities = 45/120 (37%), Positives = 65/120 (54%)
Frame = +1
Query: 373 DRRSTTGWVFHLGSGAIAWTSKRQEIIALSSTEVEYVAATSAACXXXXXXXXXXXXXXXX 552
DR+S +G++F LGSGA+ W+SK+Q + ALSS E EY AATS+ C
Sbjct: 1126 DRKSXSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXC---------------- 1169
Query: 553 XXXXXXXXXXXXXXXXXXXXXADMEVPQTRATILHCDSLSAIAIARNPAHHGRTKHIDVR 732
AD+ T+++CD+ +AIA+ +NPA+HGRTKH+D+R
Sbjct: 1170 ------------QAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIR 1217
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 104 bits (259), Expect(2) = 4e-42
Identities = 46/90 (51%), Positives = 64/90 (71%)
Frame = +2
Query: 5 RADESRYRSIVGSLLYLSHTRPELMFAVSLISKFVQKPTKHHFGAMKRILHYIAATLNMG 184
RAD R+ S+V L+YL+HTRP++ F V +IS+F+ P+K H GA KR+L YI T + G
Sbjct: 1031 RADARRFXSLVRGLIYLTHTRPDIAFPVEVISRFMHCPSKQHLGAAKRLLRYIVGTYDFG 1090
Query: 185 LKYESVEDFHLQGYVDSDWGGSIEDRRSTT 274
+ Y V++F L GY DSDW G +EDR+ST+
Sbjct: 1091 IWYGHVQEFKLVGYTDSDWAGCLEDRKSTS 1120
Score = 93.6 bits (231), Expect(2) = 4e-42
Identities = 47/120 (39%), Positives = 68/120 (56%)
Frame = +1
Query: 373 DRRSTTGWVFHLGSGAIAWTSKRQEIIALSSTEVEYVAATSAACXXXXXXXXXXXXXXXX 552
DR+ST+G++F LGSGA+ W+SK+Q + ALSS+E EY AATS+AC
Sbjct: 1115 DRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSAC---------------- 1158
Query: 553 XXXXXXXXXXXXXXXXXXXXXADMEVPQTRATILHCDSLSAIAIARNPAHHGRTKHIDVR 732
AD+ T+++CD+ +AIA+ +NPA+HGRTKH+D+R
Sbjct: 1159 ------------QAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIR 1206
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 104 bits (259), Expect(2) = 1e-37
Identities = 44/88 (50%), Positives = 66/88 (75%)
Frame = +2
Query: 11 DESRYRSIVGSLLYLSHTRPELMFAVSLISKFVQKPTKHHFGAMKRILHYIAATLNMGLK 190
D + ++S+VGSL YL+ TRP++++AV ++S++++ PT HF A KRIL YI T+N GL
Sbjct: 1122 DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLH 1181
Query: 191 YESVEDFHLQGYVDSDWGGSIEDRRSTT 274
Y + D+ L GY DSDWGG ++DR+ST+
Sbjct: 1182 YSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209
Score = 78.6 bits (192), Expect(2) = 1e-37
Identities = 43/121 (35%), Positives = 60/121 (49%)
Frame = +1
Query: 373 DRRSTTGWVFHLGSGAIAWTSKRQEIIALSSTEVEYVAATSAACXXXXXXXXXXXXXXXX 552
DR+ST+G+VF++G A W SK+Q I+ LS+ E EYVAATS C
Sbjct: 1204 DRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVC---------------- 1247
Query: 553 XXXXXXXXXXXXXXXXXXXXXADMEVPQTRATILHCDSLSAIAIARNPAHHGRTKHIDVR 732
++ +PQ T + D+ SAIA+A+NP H R+KHID R
Sbjct: 1248 ------------HAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTR 1295
Query: 733 F 735
+
Sbjct: 1296 Y 1296