BLASTX nr result

ID: Dioscorea21_contig00016844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016844
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   104   8e-21
ref|NP_001067291.1| Os12g0618300 [Oryza sativa Japonica Group] g...   100   2e-19
ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003561853.1| PREDICTED: large subunit GTPase 1 homolog [B...    99   4e-19
ref|XP_003539853.1| PREDICTED: large subunit GTPase 1 homolog [G...    97   2e-18

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  104 bits (259), Expect = 8e-21
 Identities = 60/123 (48%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 ILKDYIDGKLPHYEMPPDGESEDDNSLLVGVTPSF-EDHESHISDDNEHETSISFENGTD 191
           ILKDYIDGK+PH+EMPP G +++ +       PSF E HES  SD      S S      
Sbjct: 464 ILKDYIDGKVPHFEMPP-GMTDEVSEFEDPAEPSFSETHESDASDSENPPNSES--ESES 520

Query: 190 VPDINHVLNDLESFDMXXXXXXXXXXXXXXXXXXXAHKHHKKPQRKKDRSWRVGNDNGDG 11
            P++ HVLNDL++FDM                    HK HKKPQRKKDRSWRV ND  DG
Sbjct: 521 APNLEHVLNDLDAFDMANGLASKKAPVQKTPKAP--HKQHKKPQRKKDRSWRVKNDEDDG 578

Query: 10  MPV 2
           MPV
Sbjct: 579 MPV 581


>ref|NP_001067291.1| Os12g0618300 [Oryza sativa Japonica Group]
           gi|77557083|gb|ABA99879.1| expressed protein [Oryza
           sativa Japonica Group] gi|113649798|dbj|BAF30310.1|
           Os12g0618300 [Oryza sativa Japonica Group]
           gi|125537429|gb|EAY83917.1| hypothetical protein
           OsI_39140 [Oryza sativa Indica Group]
           gi|125580093|gb|EAZ21239.1| hypothetical protein
           OsJ_36891 [Oryza sativa Japonica Group]
          Length = 598

 Score =  100 bits (248), Expect = 2e-19
 Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
 Frame = -3

Query: 367 ILKDYIDGKLPHYEMPP---DGESE-DDNSLLVGVTPSFEDHESHISDDNEHETSISFEN 200
           ILKDYIDGK+PH+E+PP   D E+E ++ S L G T S  + ES  SD +E + ++    
Sbjct: 462 ILKDYIDGKIPHFELPPGMVDTENEHEETSGLEGPTTSAYN-ESGGSDSDERDDTVDPAQ 520

Query: 199 GTDVPDINHVLNDLESFDMXXXXXXXXXXXXXXXXXXXAHKHHKKPQRKKDRSWRVGNDN 20
               PD+ HVL+DLESFD+                    HK HKKPQRKKDRSWRVGND 
Sbjct: 521 ----PDMRHVLSDLESFDLATEGSKPAGKKKKEAS----HKQHKKPQRKKDRSWRVGNDG 572

Query: 19  GDGMPV 2
           GDG  V
Sbjct: 573 GDGTAV 578


>ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/123 (47%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = -3

Query: 367 ILKDYIDGKLPHYEMPPDGESEDDNSLLVGVTPSFEDHESHISDDNEHETSISFENGTDV 188
           ILKDYIDGKL H+E+PP G S+++ S       S    E+H SD ++ E      +G + 
Sbjct: 469 ILKDYIDGKLTHHEIPP-GISDEEGSDQDDAGSSLS--ETHQSDSSDTENPAE-NDGKNT 524

Query: 187 PDINHVLNDLESFDMXXXXXXXXXXXXXXXXXXXA-HKHHKKPQRKKDRSWRVGNDNGDG 11
           P + HVL+DL SFDM                   A HKHHKKPQ+KKDRSWR+ ND GDG
Sbjct: 525 PALEHVLDDLNSFDMANGLAHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIENDGGDG 584

Query: 10  MPV 2
           MPV
Sbjct: 585 MPV 587


>ref|XP_003561853.1| PREDICTED: large subunit GTPase 1 homolog [Brachypodium distachyon]
          Length = 602

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
 Frame = -3

Query: 367 ILKDYIDGKLPHYEMPPD----GESEDDNSLLVGVTPSFEDHESHISDDNEHETSISFEN 200
           ILKDYIDGK+PH+E+PP     G   +D S +     + +D E  I+ D EH+  I+   
Sbjct: 467 ILKDYIDGKIPHFELPPGEIDAGTDMEDTSDVEDSNTAADDQEDDIASD-EHDEEINRAE 525

Query: 199 GTDVPDINHVLNDLESFDMXXXXXXXXXXXXXXXXXXXAHKHHKKPQRKKDRSWRVGNDN 20
               P+I+H L+DLESFD+                    HKHH+KPQRKKDRSWRVGND 
Sbjct: 526 ----PNISHALSDLESFDLHGEVSKASTKKKESS-----HKHHRKPQRKKDRSWRVGNDG 576

Query: 19  GDGMPV 2
            DG  V
Sbjct: 577 ADGSGV 582


>ref|XP_003539853.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max]
          Length = 598

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 58/130 (44%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
 Frame = -3

Query: 367 ILKDYIDGKLPHYEMPPDGESEDDNSLLVGVTPSFEDHESHISDDNEHETSISFENGTDV 188
           +LKDYIDGKLPHY+MPP G S+++ +L        E+   H S D +   S + E+ +DV
Sbjct: 463 MLKDYIDGKLPHYQMPP-GASDEEQAL--------EEPAGHDSVDLDASDSSAIEDASDV 513

Query: 187 -----PDINHVLNDLESFDMXXXXXXXXXXXXXXXXXXXAHKHHKKPQRKKDRSWR---V 32
                P++ HVL DL SFDM                    H HHKKPQRKKDRSWR    
Sbjct: 514 ESELAPNLEHVLVDLNSFDMANGLAPKNTTTVKKPKASHKH-HHKKPQRKKDRSWRAGKA 572

Query: 31  GNDNGDGMPV 2
           GN++ DGMPV
Sbjct: 573 GNEDADGMPV 582


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