BLASTX nr result

ID: Dioscorea21_contig00016808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016808
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513198.1| eukaryotic translation initiation factor 3 s...   140   1e-31
ref|XP_002298448.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002263417.2| PREDICTED: protein KIAA0664 homolog [Vitis v...   135   3e-30
emb|CBI24851.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_004161405.1| PREDICTED: LOW QUALITY PROTEIN: clustered mi...   132   2e-29

>ref|XP_002513198.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223547696|gb|EEF49189.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1424

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/85 (77%), Positives = 79/85 (92%)
 Frame = -3

Query: 256  RLGVKKITVVRNLCQKVGIKIAARKYDLEAAAPFQISDILDLQPVVKHSVPVCSEARDLM 77
            R  VKK++V+RNLCQKVG+ +AARKYDL AAAPFQ++DILDLQPVVKHSVPVCSEA+DL+
Sbjct: 966  RARVKKVSVIRNLCQKVGVTVAARKYDLNAAAPFQMTDILDLQPVVKHSVPVCSEAKDLV 1025

Query: 76   DTGKARLAEGMLSEAYVLFSEAFAL 2
            +TGK +LAEGMLSEAY LFSEAF++
Sbjct: 1026 ETGKIQLAEGMLSEAYTLFSEAFSI 1050


>ref|XP_002298448.1| predicted protein [Populus trichocarpa] gi|222845706|gb|EEE83253.1|
            predicted protein [Populus trichocarpa]
          Length = 1349

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/85 (77%), Positives = 78/85 (91%)
 Frame = -3

Query: 256  RLGVKKITVVRNLCQKVGIKIAARKYDLEAAAPFQISDILDLQPVVKHSVPVCSEARDLM 77
            RL VKK++V+RNLCQKVGI IAARKYDL  A PFQ+SDIL+LQPVVKHSVP+CSEA+DL+
Sbjct: 881  RLQVKKVSVIRNLCQKVGITIAARKYDLHTAMPFQMSDILNLQPVVKHSVPLCSEAKDLV 940

Query: 76   DTGKARLAEGMLSEAYVLFSEAFAL 2
            +TGK +LAEGMLSEAY LFSEAF++
Sbjct: 941  ETGKVQLAEGMLSEAYTLFSEAFSI 965


>ref|XP_002263417.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1442

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/85 (75%), Positives = 79/85 (92%)
 Frame = -3

Query: 256  RLGVKKITVVRNLCQKVGIKIAARKYDLEAAAPFQISDILDLQPVVKHSVPVCSEARDLM 77
            R  VKK++V+RNLCQKVGI IAARKYDL++A+PFQ +DIL+LQPVVKHSVPVCSEA+DL+
Sbjct: 968  RARVKKVSVIRNLCQKVGITIAARKYDLDSASPFQTADILNLQPVVKHSVPVCSEAKDLV 1027

Query: 76   DTGKARLAEGMLSEAYVLFSEAFAL 2
            +TGK +LAEGML+EAY LFSEAF++
Sbjct: 1028 ETGKVQLAEGMLTEAYTLFSEAFSI 1052


>emb|CBI24851.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/85 (75%), Positives = 79/85 (92%)
 Frame = -3

Query: 256  RLGVKKITVVRNLCQKVGIKIAARKYDLEAAAPFQISDILDLQPVVKHSVPVCSEARDLM 77
            R  VKK++V+RNLCQKVGI IAARKYDL++A+PFQ +DIL+LQPVVKHSVPVCSEA+DL+
Sbjct: 971  RARVKKVSVIRNLCQKVGITIAARKYDLDSASPFQTADILNLQPVVKHSVPVCSEAKDLV 1030

Query: 76   DTGKARLAEGMLSEAYVLFSEAFAL 2
            +TGK +LAEGML+EAY LFSEAF++
Sbjct: 1031 ETGKVQLAEGMLTEAYTLFSEAFSI 1055


>ref|XP_004161405.1| PREDICTED: LOW QUALITY PROTEIN: clustered mitochondria protein-like
            [Cucumis sativus]
          Length = 1406

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/82 (76%), Positives = 75/82 (91%)
 Frame = -3

Query: 247  VKKITVVRNLCQKVGIKIAARKYDLEAAAPFQISDILDLQPVVKHSVPVCSEARDLMDTG 68
            VKK++VVRNLC KVGI +AARKYDL +AAPFQ SDIL+LQPV+KHSVPVCSEA+DL++TG
Sbjct: 956  VKKVSVVRNLCHKVGITVAARKYDLSSAAPFQTSDILNLQPVIKHSVPVCSEAKDLVETG 1015

Query: 67   KARLAEGMLSEAYVLFSEAFAL 2
            K +LAEGMLSEAY LFSEA ++
Sbjct: 1016 KLKLAEGMLSEAYALFSEAVSI 1037


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