BLASTX nr result

ID: Dioscorea21_contig00016786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016786
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   246   6e-63
ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   241   1e-61
ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [S...   239   4e-61
gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]     239   5e-61
ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group] g...   237   2e-60

>ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera]
           gi|296086209|emb|CBI31650.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  246 bits (627), Expect = 6e-63
 Identities = 126/211 (59%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXDRE 182
           +LRMYATC              SGLLGHTELRLH+PPSIA A               DRE
Sbjct: 75  TLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDRE 134

Query: 183 FDDLDYDTLRALDSDNSPEVPSMSEEEINALPVHKYK-AQLHQGSTSVPKGNXXXXXXXX 359
           FDDLDY+TLRALDS+N P  PSMSEEEINALPVHKYK A    G +S+ +G+        
Sbjct: 135 FDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGSSMQQGSSS------ 188

Query: 360 XXXXALTEKRLDNNKPDGNIKAPEDELTCSVCLEQVNVGELVRSLPCLHQFHSNCIDPWL 539
               A  EK+ D N    + KAP+DELTCSVCLEQVNVGEL+RSLPCLHQFH+NCIDPWL
Sbjct: 189 ----ASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWL 244

Query: 540 RQQGTCPVCKYKVSSGWQDREAGEPDASYMV 632
           RQQGTCPVCK++ + GWQ+   G  DASYMV
Sbjct: 245 RQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275


>ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus]
          Length = 275

 Score =  241 bits (616), Expect = 1e-61
 Identities = 125/210 (59%), Positives = 140/210 (66%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXDRE 182
           +LRMYATC              SGLLGHTELRLH+PPSIA A               DRE
Sbjct: 76  TLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDRE 135

Query: 183 FDDLDYDTLRALDSDNSPEVPSMSEEEINALPVHKYKAQLHQGSTSVPKGNXXXXXXXXX 362
           FDDLDY+TLRALDSDN+P  PSMSEE+INALPVHKYK    Q  +SV +           
Sbjct: 136 FDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQ---------QA 186

Query: 363 XXXALTEKRLDNNKPDGNIKAPEDELTCSVCLEQVNVGELVRSLPCLHQFHSNCIDPWLR 542
                 EKR D+    G+ K  EDELTCSVCLEQVNVGEL+RSLPCLHQFH+NCIDPWLR
Sbjct: 187 SSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLR 246

Query: 543 QQGTCPVCKYKVSSGWQDREAGEPDASYMV 632
           QQGTCPVCK++  SGW ++E GE DA YMV
Sbjct: 247 QQGTCPVCKFRAVSGWSEQEQGETDA-YMV 275


>ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
           gi|241921963|gb|EER95107.1| hypothetical protein
           SORBIDRAFT_01g039740 [Sorghum bicolor]
          Length = 280

 Score =  239 bits (611), Expect = 4e-61
 Identities = 123/210 (58%), Positives = 136/210 (64%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXDRE 182
           SLRMYATC              +  LGHTELR+HVPP+IA A               DRE
Sbjct: 77  SLRMYATCQQLAHAAAA-----NNFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDRE 131

Query: 183 FDDLDYDTLRALDSDNSPEVPSMSEEEINALPVHKYKAQLHQGSTSVPKGNXXXXXXXXX 362
           FDDLDYDTLRALD+DNSP  PSMSEEEIN+LPV KYK Q  QG+    K +         
Sbjct: 132 FDDLDYDTLRALDADNSPHTPSMSEEEINSLPVFKYKVQAQQGNAPAQKSDGPSQLSVSS 191

Query: 363 XXXALTEKRLDNNKPDGNIKAPEDELTCSVCLEQVNVGELVRSLPCLHQFHSNCIDPWLR 542
                 EK+ D  K DG  K PEDELTCSVCLEQV VG+L+RSLPCLHQFH NCIDPWLR
Sbjct: 192 TGSG-NEKKQDGLKSDGTSKTPEDELTCSVCLEQVAVGDLLRSLPCLHQFHVNCIDPWLR 250

Query: 543 QQGTCPVCKYKVSSGWQDREAGEPDASYMV 632
           QQGTCP+CK++VS GW     GE DASYMV
Sbjct: 251 QQGTCPICKHQVSDGWHATGNGEEDASYMV 280


>gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
          Length = 275

 Score =  239 bits (610), Expect = 5e-61
 Identities = 124/210 (59%), Positives = 139/210 (66%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXDRE 182
           +LRMYATC              SGLLGHTELRLH+PPSIA A               DRE
Sbjct: 76  TLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDRE 135

Query: 183 FDDLDYDTLRALDSDNSPEVPSMSEEEINALPVHKYKAQLHQGSTSVPKGNXXXXXXXXX 362
           FDDLDY+TLRALDSDN+P  PSMSEE+INALPVHKYK    Q  +SV +           
Sbjct: 136 FDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQ---------QA 186

Query: 363 XXXALTEKRLDNNKPDGNIKAPEDELTCSVCLEQVNVGELVRSLPCLHQFHSNCIDPWLR 542
                 EKR D+    G+ K  EDELTCSVCLEQVNVGEL+RSLPCLHQFH+NCIDPWLR
Sbjct: 187 SSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLR 246

Query: 543 QQGTCPVCKYKVSSGWQDREAGEPDASYMV 632
           QQGTCPVCK++  SGW ++  GE DA YMV
Sbjct: 247 QQGTCPVCKFRAVSGWSEQGQGETDA-YMV 275


>ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group]
           gi|108707430|gb|ABF95225.1| zinc finger family protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|215765669|dbj|BAG87366.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255674397|dbj|BAF11610.2| Os03g0272300 [Oryza sativa
           Japonica Group]
          Length = 233

 Score =  237 bits (605), Expect = 2e-60
 Identities = 124/210 (59%), Positives = 135/210 (64%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXDRE 182
           SLRMYATC              +G LGHTELR+HVPP+IA A               DRE
Sbjct: 29  SLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDRE 88

Query: 183 FDDLDYDTLRALDSDNSPEVPSMSEEEINALPVHKYKAQLHQGSTSVPKGNXXXXXXXXX 362
           FDDLDYD LRALD+DNSP  PSMSEEEINALPV KYK Q HQGS S  K +         
Sbjct: 89  FDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSS 148

Query: 363 XXXALTEKRLDNNKPDGNIKAPEDELTCSVCLEQVNVGELVRSLPCLHQFHSNCIDPWLR 542
                 EK+ D  K D      EDELTCSVCLEQV VG+L+RSLPCLHQFH+NCIDPWLR
Sbjct: 149 TESG-NEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLR 207

Query: 543 QQGTCPVCKYKVSSGWQDREAGEPDASYMV 632
           QQGTCPVCK++VS GW     GE DAS MV
Sbjct: 208 QQGTCPVCKHRVSDGWH----GEADASNMV 233