BLASTX nr result
ID: Dioscorea21_contig00016780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00016780 (1309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_178215.1| zinc ion binding / nucleic acid binding [Arabid... 119 2e-24 emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulga... 114 4e-23 dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like... 113 9e-23 emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7... 110 8e-22 dbj|BAE79383.1| unnamed protein product [Ipomoea batatas] 109 1e-21 >ref|NP_178215.1| zinc ion binding / nucleic acid binding [Arabidopsis thaliana] gi|6598620|gb|AAF18653.1| hypothetical protein [Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc ion binding / nucleic acid binding protein [Arabidopsis thaliana] Length = 515 Score = 119 bits (298), Expect = 2e-24 Identities = 70/191 (36%), Positives = 97/191 (50%), Gaps = 1/191 (0%) Frame = +2 Query: 8 PLEVVKNSLAAMWRGMGPFWVSDMSNGFYLIRCEKPEMIDAVLWEGPWTISGMVLQLTPW 187 P+ V+ L +W+ G V D+ F++IR E E A L GPW + G L + W Sbjct: 91 PISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDW 150 Query: 188 RDHFQPAFEKLNLAAVWVQLHHLPIEYWQGEILELIGEQFGRLLKADDHTEKLTRTKFAR 367 F P + + VWV+L ++P Y+ +L I GR LK D +T + +FAR Sbjct: 151 SSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFAR 210 Query: 368 ICVEIDLSKPLKRGFWIGDDDRRCMVAILYERLPVFCFKCGLVGHGENGCP-SVVSGKSG 544 +C+E++L+KPLK I D R VA YE L C CG+ GH + CP +VV S Sbjct: 211 VCIEVNLAKPLKGTVLINGD--RYFVA--YEGLSKICSSCGIYGHLVHSCPRNVVVKVSA 266 Query: 545 GVECVVDGAPV 577 G E V D A V Sbjct: 267 GAETVTDRAVV 277 >emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 678 Score = 114 bits (286), Expect = 4e-23 Identities = 55/168 (32%), Positives = 90/168 (53%) Frame = +2 Query: 14 EVVKNSLAAMWRGMGPFWVSDMSNGFYLIRCEKPEMIDAVLWEGPWTISGMVLQLTPWRD 193 +++ L W G ++D+ + +Y++R E D VL +GPW I L + W Sbjct: 152 DILVRRLKYKWNLKGDIALTDVGHAYYVVRFNNMEDYDFVLTQGPWLIGDSYLTIRKWVP 211 Query: 194 HFQPAFEKLNLAAVWVQLHHLPIEYWQGEILELIGEQFGRLLKADDHTEKLTRTKFARIC 373 +F E + WV++ HL +EY+ + L IG + G+++K D +TE + R ++ R C Sbjct: 212 NFVSDQEPIKKLTAWVRIPHLSVEYFDKQFLHSIGSKIGKVIKIDRNTESMDRGQYVRFC 271 Query: 374 VEIDLSKPLKRGFWIGDDDRRCMVAILYERLPVFCFKCGLVGHGENGC 517 +E+DLSKPL F + + + YE L + CFKCG +GH E+ C Sbjct: 272 IEVDLSKPLLSKFRLNGK----VWIVQYEGLRLICFKCGHLGHKEDTC 315 >dbj|BAB01940.1| non-LTR retrolelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 591 Score = 113 bits (283), Expect = 9e-23 Identities = 60/180 (33%), Positives = 91/180 (50%) Frame = +2 Query: 11 LEVVKNSLAAMWRGMGPFWVSDMSNGFYLIRCEKPEMIDAVLWEGPWTISGMVLQLTPWR 190 L V + L MW+ G +V D+ F+++R EK E L GPW G L + W Sbjct: 92 LAAVSHRLREMWKPSGAMYVLDLPRHFFMVRFEKEEEFLTALTGGPWRAFGSCLLVKAWS 151 Query: 191 DHFQPAFEKLNLAAVWVQLHHLPIEYWQGEILELIGEQFGRLLKADDHTEKLTRTKFARI 370 F P +++ +WV++ +P+ ++ IL + + GR LK D R +FAR+ Sbjct: 152 PEFNPLKDEIVTTPIWVRIADMPVSFYHKSILMSVAQGLGRPLKVDLTMLHFERGRFARV 211 Query: 371 CVEIDLSKPLKRGFWIGDDDRRCMVAILYERLPVFCFKCGLVGHGENGCPSVVSGKSGGV 550 CVE+DL +PL+ + D R VA YE L C KCG+ GH + CP +S ++ V Sbjct: 212 CVEVDLKRPLQGALLVNGD--RYYVA--YEGLTNICSKCGIYGHLVHNCPKELSEQAAAV 267 >emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7268308|emb|CAB78602.1| hypothetical protein [Arabidopsis thaliana] Length = 655 Score = 110 bits (275), Expect = 8e-22 Identities = 58/170 (34%), Positives = 88/170 (51%) Frame = +2 Query: 11 LEVVKNSLAAMWRGMGPFWVSDMSNGFYLIRCEKPEMIDAVLWEGPWTISGMVLQLTPWR 190 +EV+ L +WR G V D+ F+++R E E L GPW + G +L + W Sbjct: 107 IEVLSRKLRDLWRPTGGMSVLDLPRQFFMVRFEVEEDYMMALTGGPWRVLGSILMVQAWS 166 Query: 191 DHFQPAFEKLNLAAVWVQLHHLPIEYWQGEILELIGEQFGRLLKADDHTEKLTRTKFARI 370 F P + + VWV++ +LP+ ++ EIL I G+ +K D T + R +FAR+ Sbjct: 167 PEFNPLRDVIETTPVWVRVANLPVTFYHNEILLGIAAGLGKPIKVDLTTLRKERGRFARV 226 Query: 371 CVEIDLSKPLKRGFWIGDDDRRCMVAILYERLPVFCFKCGLVGHGENGCP 520 CVE++L PLK G + + +R + YE L C CG+ GH N CP Sbjct: 227 CVEVNLKNPLK-GTLVVNGER---YFVSYEGLQTICSLCGIYGHTVNNCP 272 >dbj|BAE79383.1| unnamed protein product [Ipomoea batatas] Length = 532 Score = 109 bits (273), Expect = 1e-21 Identities = 70/235 (29%), Positives = 110/235 (46%) Frame = +2 Query: 17 VVKNSLAAMWRGMGPFWVSDMSNGFYLIRCEKPEMIDAVLWEGPWTISGMVLQLTPWRDH 196 V+ ++W+ G + D+ G +++R + + VL +GPW I L W + Sbjct: 117 VLNQRAPSLWQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLDGPWKIFDNYLITQRWVPN 176 Query: 197 FQPAFEKLNLAAVWVQLHHLPIEYWQGEILELIGEQFGRLLKADDHTEKLTRTKFARICV 376 F+P K AVWV+L L +EY++ + ++ I E G+ L+ D T + +FAR V Sbjct: 177 FEPRTAKFQKMAVWVRLPELSMEYFRDDTIKAILENIGKPLRLDRTTMAREKGRFARAAV 236 Query: 377 EIDLSKPLKRGFWIGDDDRRCMVAILYERLPVFCFKCGLVGHGENGCPSVVSGKSGGVEC 556 EIDL KPL W+ D ++ + YE L V CF CG+VGH E CP + E Sbjct: 237 EIDLGKPLVSEIWVMGDVQK----VEYEGLHVVCFGCGVVGHREQACP---LARPTAPET 289 Query: 557 VVDGAPVLQPALSAMQLDVSGGVPHSALAAKPSPGDLEEVLDQDAGDQFGPWMVV 721 + G+ A +A +P+ G + V ++GPWM+V Sbjct: 290 MATGSNTETAADTA--------------EPQPAEGPADAVTQPAERRRYGPWMIV 330