BLASTX nr result

ID: Dioscorea21_contig00016745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016745
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578288.1| PREDICTED: uncharacterized protein LOC100838...   106   2e-21
ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group] g...   102   3e-20
gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indi...   102   3e-20
dbj|BAJ86181.1| predicted protein [Hordeum vulgare subsp. vulgar...   101   5e-20
gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays] g...   100   1e-19

>ref|XP_003578288.1| PREDICTED: uncharacterized protein LOC100838039 isoform 1
           [Brachypodium distachyon]
           gi|357158941|ref|XP_003578289.1| PREDICTED:
           uncharacterized protein LOC100838039 isoform 2
           [Brachypodium distachyon]
           gi|357158944|ref|XP_003578290.1| PREDICTED:
           uncharacterized protein LOC100838039 isoform 3
           [Brachypodium distachyon]
          Length = 600

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = -1

Query: 275 AGVGMWSDPNMGGWGAEEQSSYGEDAASDQQYGE-ASHGKDRAAERDWSGSAPERRHERE 99
           AGVGMW DP+MGGWG EEQSSYG+DAASDQ YGE  SHGK+R  ER+WSG APERR ERE
Sbjct: 443 AGVGMWPDPSMGGWGGEEQSSYGDDAASDQHYGEGGSHGKERPPEREWSG-APERRRERE 501

Query: 98  KDLGSGHDVP 69
           K+L    D+P
Sbjct: 502 KELPPPPDLP 511


>ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group]
           gi|52077336|dbj|BAD46377.1| RNA-binding protein-like
           [Oryza sativa Japonica Group]
           gi|113631696|dbj|BAF25377.1| Os09g0476100 [Oryza sativa
           Japonica Group] gi|125606072|gb|EAZ45108.1| hypothetical
           protein OsJ_29744 [Oryza sativa Japonica Group]
           gi|215712236|dbj|BAG94363.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 604

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/69 (72%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = -1

Query: 272 GVGMWSDPNMGGWGAEEQSSYGEDAASDQQYGE-ASHGKDRAAERDWSGSAPERRHEREK 96
           GVGMW DP+MGGWG EEQSSYG+DAASDQQYGE  SHGK+R  ER+WSG A +RR EREK
Sbjct: 442 GVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREWSG-ASDRRREREK 500

Query: 95  DLGSGHDVP 69
           DL    D P
Sbjct: 501 DLPPPPDWP 509


>gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indica Group]
          Length = 604

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/69 (72%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = -1

Query: 272 GVGMWSDPNMGGWGAEEQSSYGEDAASDQQYGE-ASHGKDRAAERDWSGSAPERRHEREK 96
           GVGMW DP+MGGWG EEQSSYG+DAASDQQYGE  SHGK+R  ER+WSG A +RR EREK
Sbjct: 442 GVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREWSG-ASDRRREREK 500

Query: 95  DLGSGHDVP 69
           DL    D P
Sbjct: 501 DLPPPPDWP 509


>dbj|BAJ86181.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326523525|dbj|BAJ92933.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 602

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
 Frame = -1

Query: 272 GVGMWSDPNMGG-WGAEEQSSYGEDAASDQQYGE-ASHGKDRAAERDWSGSAPERRHERE 99
           GVGMW DP+MGG WG EEQSSYG+DAASDQ YGE ASHGK+R  ER+WSG APERR ERE
Sbjct: 439 GVGMWPDPSMGGGWGGEEQSSYGDDAASDQHYGEGASHGKERPPEREWSG-APERRRERE 497

Query: 98  KDLGSGHDVP 69
           KDL    ++P
Sbjct: 498 KDLPPPPELP 507


>gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
           gi|413925204|gb|AFW65136.1| hypothetical protein
           ZEAMMB73_625740 [Zea mays]
          Length = 603

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/67 (71%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -1

Query: 266 GMWSDPNMGGWGAEEQSSYGEDAASDQQYGE-ASHGKDRAAERDWSGSAPERRHEREKDL 90
           GMW DPNMG WG EEQSSYG+DAASDQQYGE  SHGK+R  ER+WSG APERR EREKD 
Sbjct: 433 GMWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGSHGKERPPEREWSG-APERRREREKDA 491

Query: 89  GSGHDVP 69
               + P
Sbjct: 492 PPAQEWP 498


Top