BLASTX nr result

ID: Dioscorea21_contig00016707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016707
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002540140.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_002540178.1| hypothetical protein RCOM_2136480 [Ricinus c...    81   8e-14
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...    81   1e-13
ref|XP_003539990.1| PREDICTED: uncharacterized protein LOC100805...    79   3e-13
ref|XP_003632414.1| PREDICTED: uncharacterized protein LOC100855...    78   8e-13

>ref|XP_002540140.1| conserved hypothetical protein [Ricinus communis]
           gi|223498851|gb|EEF22243.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/119 (41%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
 Frame = -1

Query: 361 GKSSALKRKQSKTKGFSVGDEVEVQSEDEGFCGAWYEATVVRPL--------PRHRRHSV 206
           G+SS    +Q+  + FS+GD VEV S++EGF GAWYEAT+++ L         R     V
Sbjct: 4   GRSS----RQNSGRNFSIGDLVEVSSDEEGFRGAWYEATILKSLSSSRSCYSKRKAEALV 59

Query: 205 VYTSLLEDAVSCRPLHEYVLDSHL-XXXXXXXXXXPFQIHQVVDAFHQDGWWPGVVADV 32
            Y +LL D    +PL EYV  S +            F+   VVDAFH+DGWW G+V  V
Sbjct: 60  QYRNLLSDTDEKKPLTEYVDFSFIRPLPPVPSTIPAFEPLDVVDAFHRDGWWKGIVTKV 118


>ref|XP_002540178.1| hypothetical protein RCOM_2136480 [Ricinus communis]
           gi|223498471|gb|EEF22205.1| hypothetical protein
           RCOM_2136480 [Ricinus communis]
          Length = 167

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/119 (41%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
 Frame = -1

Query: 361 GKSSALKRKQSKTKGFSVGDEVEVQSEDEGFCGAWYEATVVRPL--------PRHRRHSV 206
           G+SS    +Q+  + FS+GD VEV S++EGF GAWYEAT+++ L         R     V
Sbjct: 4   GRSS----RQNSGRNFSIGDLVEVSSDEEGFRGAWYEATILKSLSSSRSCYSKRKAEALV 59

Query: 205 VYTSLLEDAVSCRPLHEYVLDSHL-XXXXXXXXXXPFQIHQVVDAFHQDGWWPGVVADV 32
            Y +LL D    +PL EYV  S +            F+   VVDAFH+DGWW G+V  V
Sbjct: 60  QYRTLLSDTDEKKPLTEYVDFSFIRPFPPVPSTIPAFEPLDVVDAFHRDGWWKGIVTKV 118


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
           gi|223545236|gb|EEF46744.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 689

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
 Frame = -1

Query: 337 KQSKTKGFSVGDEVEVQSEDEGFCGAWYEATVVRPL--------PRHRRHSVVYTSLLED 182
           +Q+  + FS+GD VEV S++EGF GAWYEAT+++ L         R     V Y +LL D
Sbjct: 8   RQNSGRNFSIGDLVEVSSDEEGFRGAWYEATILKSLSSSRSCYSKRKAEALVQYRNLLSD 67

Query: 181 AVSCRPLHEYVLDSHL-XXXXXXXXXXPFQIHQVVDAFHQDGWWPGVVADV 32
               +PL EYV  S +            F+   VVDAFH+DGWW G+V  V
Sbjct: 68  TDEKKPLTEYVDFSFIRPLPPVPSTIPAFEPLDVVDAFHRDGWWKGIVTKV 118


>ref|XP_003539990.1| PREDICTED: uncharacterized protein LOC100805066 [Glycine max]
          Length = 142

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = -1

Query: 340 RKQSKTKGFSVGDEVEVQSEDEGFCGAWYEATVVRPLPRHRRHSVVYTSLLEDAVSCRPL 161
           R   K   FS GD+VE+ S +EGF G++Y ATVV  L  +  + V Y +LLED  S +PL
Sbjct: 2   RPPRKRVDFSRGDKVEICSNEEGFLGSYYPATVVSRLD-NGLYVVRYDTLLEDDASFQPL 60

Query: 160 HEYVLDSHLXXXXXXXXXXPFQIHQVVDAFHQDGWWPGVVADVRGG-RYAVYF 5
            E +    L           F +HQ VDAF  DGWW G +   + G  Y VYF
Sbjct: 61  TETLFPKELRPHPPRVPRTHFALHQCVDAFDNDGWWLGQITGKKDGEHYYVYF 113


>ref|XP_003632414.1| PREDICTED: uncharacterized protein LOC100855416 [Vitis vinifera]
          Length = 147

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = -1

Query: 331 SKTKGFSVGDEVEVQSEDEGFCGAWYEATVVRPLPRH-RRHSVVYTSLLEDAVSCRPLHE 155
           ++ +G   G++VEV SE+EG  G+WY ATV+RP+ +  ++  V Y +L+ +    +PL E
Sbjct: 3   TEAEGLKKGEKVEVSSEEEGLRGSWYTATVLRPVTKKTKKIYVEYHTLMSEEDDSKPLRE 62

Query: 154 YVLDSHLXXXXXXXXXXPFQIHQVVDAFHQDGWWPGVVADV-RGGRYAVYF 5
            V    +           F++ + VDAF+ DGWW GVV  V    RY+V+F
Sbjct: 63  SVDAILVRPYPPREVGRRFKLMEEVDAFYSDGWWEGVVTQVLENSRYSVFF 113


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