BLASTX nr result

ID: Dioscorea21_contig00016689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016689
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15662.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]    57   1e-06

>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/107 (37%), Positives = 50/107 (46%)
 Frame = +2

Query: 182 FSVSTISFFHPRKLRSLSVCRCSSGGQSLIRKPKLNSRTITTPVPDLGXXXXXXXXXXXX 361
           FS   + F   ++    S  RCSS  Q L  +PK    TI   V                
Sbjct: 37  FSQRLLPFNRRKRRTPFSQIRCSSLEQGLQPRPKPKPSTIELNV--------------GK 82

Query: 362 XXXXXXHSAKKPAAFHGICAQIEKLVFFKRYDEALELFEVLQLRGGY 502
                    +KP++   +C QIEKLVFFKRY EALELFE+L+L G Y
Sbjct: 83  EAQVNETQLRKPSS--ELCGQIEKLVFFKRYHEALELFEILELNGAY 127


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/107 (37%), Positives = 50/107 (46%)
 Frame = +2

Query: 182 FSVSTISFFHPRKLRSLSVCRCSSGGQSLIRKPKLNSRTITTPVPDLGXXXXXXXXXXXX 361
           FS   + F   ++    S  RCSS  Q L  +PK    TI   V                
Sbjct: 37  FSQRLLPFNRRKRRTPFSQIRCSSLEQGLQPRPKPKPSTIELNV--------------GK 82

Query: 362 XXXXXXHSAKKPAAFHGICAQIEKLVFFKRYDEALELFEVLQLRGGY 502
                    +KP++   +C QIEKLVFFKRY EALELFE+L+L G Y
Sbjct: 83  EAQVNETQLRKPSS--ELCGQIEKLVFFKRYHEALELFEILELNGAY 127


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/107 (37%), Positives = 50/107 (46%)
 Frame = +2

Query: 182 FSVSTISFFHPRKLRSLSVCRCSSGGQSLIRKPKLNSRTITTPVPDLGXXXXXXXXXXXX 361
           FS   + F   ++    S  RCSS  Q L  +PK    TI   V                
Sbjct: 37  FSQRLLPFNRRKRRTPFSQIRCSSLEQGLQPRPKPKPSTIELNV--------------GK 82

Query: 362 XXXXXXHSAKKPAAFHGICAQIEKLVFFKRYDEALELFEVLQLRGGY 502
                    +KP++   +C QIEKLVFFKRY EALELFE+L+L G Y
Sbjct: 83  EAQVNETQLRKPSS--ELCGQIEKLVFFKRYHEALELFEILELNGAY 127


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