BLASTX nr result

ID: Dioscorea21_contig00016687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016687
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27664.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...    97   2e-18
ref|XP_002451633.1| hypothetical protein SORBIDRAFT_04g004940 [S...    90   3e-16
sp|Q653Z5.1|SPL11_ORYSJ RecName: Full=Squamosa promoter-binding-...    87   2e-15
dbj|BAJ86264.1| predicted protein [Hordeum vulgare subsp. vulgar...    87   2e-15

>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 62/145 (42%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
 Frame = +2

Query: 2   KKRSCRRRLSDHNARRRKPPPDLISFNSGRFSPFFDDRCHMN------PIWNTACPTMNS 163
           KKRSCRRRLSDHNARRRKP P+ I  NS R S F+  +  M+      PI +T  P +N 
Sbjct: 184 KKRSCRRRLSDHNARRRKPQPEGIQSNSARLSSFYGGKQQMSLVLSSVPIVHTR-PAVNP 242

Query: 164 TWDDASLDFKLMPTRVSWIKSAKTGTFNEDLRCLSFKLSNTCPSLRNDLDRLLSFKGATA 343
           +W+     F         ++   TG  +  L     +L N   +L +D  RLL  KGA A
Sbjct: 243 SWEGTCSKF---TQTKGLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIA 299

Query: 344 EALIQGPGASDVSPNLDGALDLQRA 418
           E L QG G S +S NLD + DL+RA
Sbjct: 300 EVLNQGLGDSMISSNLDTSQDLRRA 324


>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
           vinifera]
          Length = 477

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 62/145 (42%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
 Frame = +2

Query: 2   KKRSCRRRLSDHNARRRKPPPDLISFNSGRFSPFFDDRCHMN------PIWNTACPTMNS 163
           KKRSCRRRLSDHNARRRKP P+ I  NS R S F+  +  M+      PI +T  P +N 
Sbjct: 243 KKRSCRRRLSDHNARRRKPQPEGIQSNSARLSSFYGGKQQMSLVLSSVPIVHTR-PAVNP 301

Query: 164 TWDDASLDFKLMPTRVSWIKSAKTGTFNEDLRCLSFKLSNTCPSLRNDLDRLLSFKGATA 343
           +W+     F         ++   TG  +  L     +L N   +L +D  RLL  KGA A
Sbjct: 302 SWEGTCSKF---TQTKGLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIA 358

Query: 344 EALIQGPGASDVSPNLDGALDLQRA 418
           E L QG G S +S NLD + DL+RA
Sbjct: 359 EVLNQGLGDSMISSNLDTSQDLRRA 383


>ref|XP_002451633.1| hypothetical protein SORBIDRAFT_04g004940 [Sorghum bicolor]
           gi|241931464|gb|EES04609.1| hypothetical protein
           SORBIDRAFT_04g004940 [Sorghum bicolor]
          Length = 337

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 60/144 (41%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
 Frame = +2

Query: 2   KKRSCRRRLSDHNARRRKPPPDLISFNSGRF-SPFFDDRCHMNPIWNTA----CPTMNST 166
           KKRSCRRRLSDHNARRRKP PD  +F S R  S  FDDR  ++ +WN A         S 
Sbjct: 120 KKRSCRRRLSDHNARRRKPQPDAFTFASARLPSSLFDDRRQISFVWNKAPVSHVRPFTSP 179

Query: 167 WDDASLDFKLMPTRVSWIKSAKTGTFNEDLRCLSFKLSNTCPSLRNDLDRLLSFKGATAE 346
           WD +S D KL   + +   S K GT    +      +SN  P+L +  D     K     
Sbjct: 180 WDSSS-DLKLPHAKETREVSTKVGTITGQVHLDKSHMSNAIPTLSHGKDEPWPMK----- 233

Query: 347 ALIQGPGASDVSPNLDGALDLQRA 418
               GP  S  +   DGA DLQRA
Sbjct: 234 ----GPDMSITASKFDGAPDLQRA 253


>sp|Q653Z5.1|SPL11_ORYSJ RecName: Full=Squamosa promoter-binding-like protein 11
           gi|52075926|dbj|BAD45872.1| putative squamosa promoter
           binding protein-homolog 4 [Oryza sativa Japonica Group]
           gi|125598137|gb|EAZ37917.1| hypothetical protein
           OsJ_22267 [Oryza sativa Japonica Group]
          Length = 343

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
 Frame = +2

Query: 2   KKRSCRRRLSDHNARRRKPPPDLISFNSGRF-SPFFDDRCHMNPIWNTACP------TMN 160
           +KRSCRRRLSDHNARRRKP  D+ +F SG      FDDR  ++  W+   P      T +
Sbjct: 123 EKRSCRRRLSDHNARRRKPQTDVFAFGSGTLPRSLFDDRQQISFAWDNNAPLNHANTTSS 182

Query: 161 STWDDASLDFKLMPTRVSWIKSAKTGTFNEDLRCLSFKLSNTCPSLRNDLDRLLSFKGAT 340
           S+W   + D +L        +S K G  + ++R     LSN  P+L +D + LL  KGA 
Sbjct: 183 SSW---TSDLQLSQVMDISKRSRKAGADSANIR-----LSNALPTLCHDTNELLPIKGA- 233

Query: 341 AEALIQGPGASDVSPNLDGALDLQRA 418
                    AS+ +  LDGALD+QRA
Sbjct: 234 --------DASETASKLDGALDVQRA 251


>dbj|BAJ86264.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326530422|dbj|BAJ97637.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 474

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
 Frame = +2

Query: 2   KKRSCRRRLSDHNARRRKPPPDLISFNSGRFSP-FFDDRCHMNPIWNTACPTM-----NS 163
           KKRSCRRRL+DHN+RRRKP P+ ISF+S R S  F+D R   N ++  A         +S
Sbjct: 242 KKRSCRRRLNDHNSRRRKPQPEAISFSSSRMSTMFYDARQQPNFLFGQAPYVQMRSCGSS 301

Query: 164 TWDDASLDFKLMPTRVSWIKSAKTGTFNEDLRCLSFKLS-NTCP-SLRNDLDRLLSFKGA 337
           +WD+    FK+  T+  W+K   T    + +   S ++S N  P    +  D  ++FKG 
Sbjct: 302 SWDEPG-GFKVTHTKAPWLKPT-TAAGVDGMHLSSQQMSDNVMPHGAHHGFDGFMAFKGT 359

Query: 338 TAEALIQGPGASDVSPNLDGALDLQRA 418
           + +   QG  AS V+PN  GA DLQ A
Sbjct: 360 STKFPNQGVQASAVAPNSSGAPDLQHA 386


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