BLASTX nr result

ID: Dioscorea21_contig00016672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016672
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465582.1| hypothetical protein SORBIDRAFT_01g041560 [S...   102   2e-19
ref|NP_001140296.1| uncharacterized protein LOC100272341 [Zea ma...    96   2e-17
ref|XP_002466546.1| hypothetical protein SORBIDRAFT_01g009720 [S...    94   3e-17
gb|AAM23241.1|AC092553_7 Putative transposase [Oryza sativa Japo...    93   1e-16
ref|XP_002902804.1| conserved hypothetical protein [Phytophthora...    92   2e-16

>ref|XP_002465582.1| hypothetical protein SORBIDRAFT_01g041560 [Sorghum bicolor]
           gi|241919436|gb|EER92580.1| hypothetical protein
           SORBIDRAFT_01g041560 [Sorghum bicolor]
          Length = 271

 Score =  102 bits (253), Expect = 2e-19
 Identities = 66/266 (24%), Positives = 114/266 (42%)
 Frame = +2

Query: 77  RWTKEMDNVLIPLLADMARSGLKVDKSFKRQAFVEAANVMNSRFPTACMDANNVENHMRT 256
           RWT      ++  +  +  +G++ DK F      + A  +   F    +    + NH+R 
Sbjct: 2   RWTNVSSGFILRRMCQLIATGVRTDKGFNEVHLNQVARALQE-FSGNEVTGTQIYNHLRK 60

Query: 257 LKQKYQDIKKLMNLSGVGWNDTEKKLVLEDETYRTYVEGQPKAKEYLNKPIPYFEELRLV 436
            +QK+  I KL  LSG  WN+    +VLE+E Y  +++  PK  EYLNKPI +F+E++++
Sbjct: 61  WRQKWIKISKLRELSGALWNEECSMIVLEEEHYNGHIKAHPKDAEYLNKPIQHFKEMQII 120

Query: 437 AGDDHATGDYARTIYDQFGSAPVEDETAPLPTASLDGEPMDXXXXXXXXXXXXXXXXXXX 616
            G+  ATG YA    +  G+ P +   + L T   D                        
Sbjct: 121 FGNGQATGKYAMGSNEALGT-PSDFVESSLKTEVTDDTRGGKIEGTEPTKSEPGAGGKRK 179

Query: 617 XXXXXNGENVQGENIGVQIGQLVASIDRSKKKTWKEKLADALWDMEGYSDDDMEMVYNSL 796
                  + V    +   +  +  +I  +K +     L DA+  M G+SD+ +   Y  L
Sbjct: 180 RSVLSEEDVVLFTGMTQAVNNVADAIRETKVEDSHPDLYDAVMFMPGFSDEALLCAYGQL 239

Query: 797 IENKKEAENFYLRKPSLQKRWIDNFI 874
           ++N  +   F     S +  W+  F+
Sbjct: 240 LDNNAQGSAFVKMNHSHRLLWLRTFL 265


>ref|NP_001140296.1| uncharacterized protein LOC100272341 [Zea mays]
           gi|194698888|gb|ACF83528.1| unknown [Zea mays]
          Length = 295

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 54/166 (32%), Positives = 85/166 (51%)
 Frame = +2

Query: 47  GEKRKGTPNKRWTKEMDNVLIPLLADMARSGLKVDKSFKRQAFVEAANVMNSRFPTACMD 226
           G  ++G    RWT  M   ++  +  +  SG++ DK FK     + A  +   F  + + 
Sbjct: 63  GTDQRGRGAMRWTSVMSAFVLRRMCQLISSGVRTDKGFKEVHLNQVAKALQE-FIGSEVT 121

Query: 227 ANNVENHMRTLKQKYQDIKKLMNLSGVGWNDTEKKLVLEDETYRTYVEGQPKAKEYLNKP 406
              V NH+R  +Q++  + KL  LSG  W++    + LEDE Y  +++  PK  E+LNKP
Sbjct: 122 GTQVYNHLRKWRQRWMRVAKLRELSGANWDEDLCMISLEDEHYNGHIKAHPKDAEFLNKP 181

Query: 407 IPYFEELRLVAGDDHATGDYARTIYDQFGSAPVEDETAPLPTASLD 544
           I  ++E+  + G   ATG YA    +  GS P E  T+ + T SLD
Sbjct: 182 IENYKEMMTIFGTGLATGKYAMGSNEALGS-PCEVATSSVKTDSLD 226


>ref|XP_002466546.1| hypothetical protein SORBIDRAFT_01g009720 [Sorghum bicolor]
           gi|241920400|gb|EER93544.1| hypothetical protein
           SORBIDRAFT_01g009720 [Sorghum bicolor]
          Length = 325

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 2/271 (0%)
 Frame = +2

Query: 71  NKRWTKEMDNVLIPLLADMARSGLKVDKSFKRQAFVEAANVMNSRFPTACMDANNVENHM 250
           N RWT  M   ++  +  +   G++ DK FK     + A  ++  F    +    V NH+
Sbjct: 55  NLRWTDPMSGFVLRHMCQLITIGVRTDKGFKEVHLNQVAKALHE-FSGQEVTGTQVYNHL 113

Query: 251 RTLKQKYQDIKKLMNLSGVGWNDTEKKLVLEDETYRTYVEGQPKAKEYLNKPIPYFEELR 430
           R  +Q++  + KL  LSG  W++    +VLE+E Y  + +  PK  E LNKPI +++++ 
Sbjct: 114 RKWRQRWVRVTKLRELSGALWDEDACMIVLEEEHYNGHTQAHPKDAELLNKPIQHYKQMM 173

Query: 431 LVAGDDHATGDYARTIYDQFGSAP--VEDETAPLPTASLDGEPMDXXXXXXXXXXXXXXX 604
           ++ G+  ATG YA    +  G+     E    P PT  L G+                  
Sbjct: 174 IIFGNGQATGKYAMGSNEPLGTPSDFAESSLKPNPTELLSGK----TDTVDATKPEVVVG 229

Query: 605 XXXXXXXXXNGENVQGENIGVQIGQLVASIDRSKKKTWKEKLADALWDMEGYSDDDMEMV 784
                    + + V    +   +  +  +I  +K +    +L  A+  + G++D+ +   
Sbjct: 230 NKRKRSVLADEDVVLFTGMADAVRDVADAIRSTKVEDSHLELYAAVMYVPGFTDEALMCA 289

Query: 785 YNSLIENKKEAENFYLRKPSLQKRWIDNFIA 877
           Y  L++NK     F     S +  W+  F+A
Sbjct: 290 YGHLLDNKALGTTFVKMVDSHRVLWLRTFLA 320


>gb|AAM23241.1|AC092553_7 Putative transposase [Oryza sativa Japonica Group]
           gi|21326484|gb|AAM47612.1|AC122147_1 Putative
           transposase [Oryza sativa Japonica Group]
           gi|110288571|gb|ABB46678.2| transposon protein,
           putative, CACTA, En/Spm sub-class [Oryza sativa Japonica
           Group]
          Length = 535

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 46/167 (27%), Positives = 83/167 (49%)
 Frame = +2

Query: 14  LIRMNNTEGTQGEKRKGTPNKRWTKEMDNVLIPLLADMARSGLKVDKSFKRQAFVEAANV 193
           L+ M+N  G     + G+ +  WT  M + ++  LA++   G +    FK       A  
Sbjct: 254 LMEMDNNSG-----KGGSTHASWTSAMSSFMLSHLANVVAGGTRTSSGFKAVHLNACARA 308

Query: 194 MNSRFPTACMDANNVENHMRTLKQKYQDIKKLMNLSGVGWNDTEKKLVLEDETYRTYVEG 373
           +N RF  + +    ++NH++T ++K+  I +L  +S  GW++    + L+DE Y  Y+E 
Sbjct: 309 VNERF-NSTLTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGYIED 367

Query: 374 QPKAKEYLNKPIPYFEELRLVAGDDHATGDYARTIYDQFGSAPVEDE 514
                 Y NKP+ ++ E+  + G   ATG YA+      G+  V+D+
Sbjct: 368 HKADANYFNKPLAHYGEMLTIFGSTMATGKYAKDSSSVLGTEDVQDD 414


>ref|XP_002902804.1| conserved hypothetical protein [Phytophthora infestans T30-4]
           gi|262097922|gb|EEY55974.1| conserved hypothetical
           protein [Phytophthora infestans T30-4]
          Length = 201

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 43/136 (31%), Positives = 76/136 (55%)
 Frame = +2

Query: 80  WTKEMDNVLIPLLADMARSGLKVDKSFKRQAFVEAANVMNSRFPTACMDANNVENHMRTL 259
           W  +MD  L+  + D A++G + D  FK++A+V     MN RF    +    ++  ++TL
Sbjct: 14  WDLDMDVFLVEAMTDQAKTGKRADSGFKKEAWVAVHESMNERFNKE-LTIQQIKTRVQTL 72

Query: 260 KQKYQDIKKLMNLSGVGWNDTEKKLVLEDETYRTYVEGQPKAKEYLNKPIPYFEELRLVA 439
           K KY  I  ++ +SG GW+     +++ D+ +  YV   PKA +Y  K +PY+E+L  + 
Sbjct: 73  KSKYTTISHMLRVSGFGWDTNHNVVLVHDDVWDRYVSEHPKAIDYRKKAVPYYEDLVDLF 132

Query: 440 GDDHATGDYARTIYDQ 487
              +ATG++A ++  Q
Sbjct: 133 EGTYATGEHALSLTSQ 148


Top