BLASTX nr result

ID: Dioscorea21_contig00016653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016653
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   164   2e-86
ref|XP_004165071.1| PREDICTED: 60S acidic ribosomal protein P0-l...   162   3e-86
ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [...   162   1e-85
ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycin...   164   3e-82
emb|CAN76468.1| hypothetical protein VITISV_030042 [Vitis vinifera]   164   3e-79

>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  164 bits (415), Expect(3) = 2e-86
 Identities = 81/97 (83%), Positives = 90/97 (92%)
 Frame = -3

Query: 291 VLAKLGIRPFSYGLVVLSVYNNGSVFSPEVLDLTEDDLTEKFAVGVGMITAFSLAIS*PT 112
           +LAKLGIRPFSYGLVVLSVY+NGSVFSPEVLDLTE+DL EKFA GV M+T+ SLAIS PT
Sbjct: 177 LLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPT 236

Query: 111 LAATPHMFINGYKNVLAVAIATDYSYPQAEKVKEYLK 1
           LAA PHMFIN YKNVLAVA+AT+YS+PQA+KVKEYLK
Sbjct: 237 LAAAPHMFINAYKNVLAVAVATEYSFPQADKVKEYLK 273



 Score =  109 bits (273), Expect(3) = 2e-86
 Identities = 51/63 (80%), Positives = 60/63 (95%)
 Frame = -3

Query: 738 MAIKPSKAEKKVQYDKKLCRLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMSKNT 559
           MA+KPSKA+KK+ YD+KLC+LLDEYSQ+LI AADNVGSNQLQNIRKGLRGDSVVLM KNT
Sbjct: 1   MAVKPSKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 558 LIR 550
           +++
Sbjct: 61  MMK 63



 Score = 94.0 bits (232), Expect(3) = 2e-86
 Identities = 57/93 (61%), Positives = 59/93 (63%), Gaps = 33/93 (35%)
 Frame = -2

Query: 469 GNVGLIFTKGDLKEVSEEVAKYKV---------------------------------LNI 389
           GNVGLIFTKGDLKEVSEEVAKYKV                                 LNI
Sbjct: 87  GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNI 146

Query: 388 PTKINKGTVEIITPVELIRKG*KVGSSEAALLS 290
           PTKINKGTVEIITPVELI+KG KVGSSEAALL+
Sbjct: 147 PTKINKGTVEIITPVELIKKGDKVGSSEAALLA 179


>ref|XP_004165071.1| PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus]
          Length = 320

 Score =  162 bits (410), Expect(3) = 3e-86
 Identities = 80/96 (83%), Positives = 89/96 (92%)
 Frame = -3

Query: 291 VLAKLGIRPFSYGLVVLSVYNNGSVFSPEVLDLTEDDLTEKFAVGVGMITAFSLAIS*PT 112
           +LAKLGIRPFSYGLVVLSVY+NGSVFSP+VLDLTEDDL EKFA+GV M+T+ SLAIS PT
Sbjct: 177 LLAKLGIRPFSYGLVVLSVYDNGSVFSPQVLDLTEDDLLEKFALGVSMVTSLSLAISYPT 236

Query: 111 LAATPHMFINGYKNVLAVAIATDYSYPQAEKVKEYL 4
           LAA PHM IN YKN+LAVA+ATDYS+PQAEKVKEYL
Sbjct: 237 LAAAPHMLINAYKNLLAVAVATDYSFPQAEKVKEYL 272



 Score =  111 bits (277), Expect(3) = 3e-86
 Identities = 53/63 (84%), Positives = 60/63 (95%)
 Frame = -3

Query: 738 MAIKPSKAEKKVQYDKKLCRLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMSKNT 559
           MAIKP+KAEKKV YD KLC+LLDEYSQVL+VAADNVGSNQLQNIRKGLRGDS+VLM KNT
Sbjct: 1   MAIKPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNT 60

Query: 558 LIR 550
           +++
Sbjct: 61  MMK 63



 Score = 94.0 bits (232), Expect(3) = 3e-86
 Identities = 57/93 (61%), Positives = 59/93 (63%), Gaps = 33/93 (35%)
 Frame = -2

Query: 469 GNVGLIFTKGDLKEVSEEVAKYKV---------------------------------LNI 389
           GNVGLIFTKGDLKEVSEEVAKYKV                                 LNI
Sbjct: 87  GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNI 146

Query: 388 PTKINKGTVEIITPVELIRKG*KVGSSEAALLS 290
           PTKINKGTVEIITPVELI+KG KVGSSEAALL+
Sbjct: 147 PTKINKGTVEIITPVELIKKGDKVGSSEAALLA 179


>ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  162 bits (411), Expect(3) = 1e-85
 Identities = 79/97 (81%), Positives = 90/97 (92%)
 Frame = -3

Query: 291 VLAKLGIRPFSYGLVVLSVYNNGSVFSPEVLDLTEDDLTEKFAVGVGMITAFSLAIS*PT 112
           +LAKLGIRPFSYGLVVLSVY+NGSVFSPEVLDLTE+DL EKFA GV M+T+ SLAIS PT
Sbjct: 177 LLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPT 236

Query: 111 LAATPHMFINGYKNVLAVAIATDYSYPQAEKVKEYLK 1
           LAA PHMF+N YKNVL+VA+ATDYS+PQA+KVKE+LK
Sbjct: 237 LAAAPHMFVNAYKNVLSVAVATDYSFPQADKVKEFLK 273



 Score =  108 bits (270), Expect(3) = 1e-85
 Identities = 50/63 (79%), Positives = 60/63 (95%)
 Frame = -3

Query: 738 MAIKPSKAEKKVQYDKKLCRLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMSKNT 559
           MA+KPSKA+KK+ YD+KLC+LLDEY+Q+LI AADNVGSNQLQNIRKGLRGDSVVLM KNT
Sbjct: 1   MAVKPSKADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 558 LIR 550
           +++
Sbjct: 61  MMK 63



 Score = 94.0 bits (232), Expect(3) = 1e-85
 Identities = 57/93 (61%), Positives = 59/93 (63%), Gaps = 33/93 (35%)
 Frame = -2

Query: 469 GNVGLIFTKGDLKEVSEEVAKYKV---------------------------------LNI 389
           GNVGLIFT+GDLKEVSEEVAKYKV                                 LNI
Sbjct: 87  GNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNI 146

Query: 388 PTKINKGTVEIITPVELIRKG*KVGSSEAALLS 290
           PTKINKGTVEIITPVELIRKG KVGSSEAALL+
Sbjct: 147 PTKINKGTVEIITPVELIRKGDKVGSSEAALLA 179


>ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
           gi|255641162|gb|ACU20858.1| unknown [Glycine max]
          Length = 319

 Score =  164 bits (414), Expect(3) = 3e-82
 Identities = 80/97 (82%), Positives = 89/97 (91%)
 Frame = -3

Query: 291 VLAKLGIRPFSYGLVVLSVYNNGSVFSPEVLDLTEDDLTEKFAVGVGMITAFSLAIS*PT 112
           +LAKLGIRPFSYGLVVLSVY+NGSVFSPEVLDLTEDDL EKFA GV M+T+ SLAIS PT
Sbjct: 177 LLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPT 236

Query: 111 LAATPHMFINGYKNVLAVAIATDYSYPQAEKVKEYLK 1
           LAA PHMF+N YKNVLAVA+ TDYS+P+A+KVKEYLK
Sbjct: 237 LAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLK 273



 Score = 96.3 bits (238), Expect(3) = 3e-82
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = -3

Query: 738 MAIKPSKAEKKVQYDKKLCRLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMSKNT 559
           MA K +KAEKK+ YD KLC L++EY Q+L+V +DNVGSNQLQNIRKGLRGDSVVLM KNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 558 LIR 550
           +++
Sbjct: 61  MMK 63



 Score = 94.0 bits (232), Expect(3) = 3e-82
 Identities = 57/93 (61%), Positives = 59/93 (63%), Gaps = 33/93 (35%)
 Frame = -2

Query: 469 GNVGLIFTKGDLKEVSEEVAKYKV---------------------------------LNI 389
           GNVGLIFTKGDLKEVSEEVAKYKV                                 LNI
Sbjct: 87  GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNI 146

Query: 388 PTKINKGTVEIITPVELIRKG*KVGSSEAALLS 290
           PTKINKGTVEIITPVELI+KG KVGSSEAALL+
Sbjct: 147 PTKINKGTVEIITPVELIKKGDKVGSSEAALLA 179


>emb|CAN76468.1| hypothetical protein VITISV_030042 [Vitis vinifera]
          Length = 303

 Score =  164 bits (415), Expect(3) = 3e-79
 Identities = 81/97 (83%), Positives = 90/97 (92%)
 Frame = -3

Query: 291 VLAKLGIRPFSYGLVVLSVYNNGSVFSPEVLDLTEDDLTEKFAVGVGMITAFSLAIS*PT 112
           +LAKLGIRPFSYGLVVLSVY+NGSVFSPEVLDLTE+DL EKFA GV M+T+ SLAIS PT
Sbjct: 160 LLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPT 219

Query: 111 LAATPHMFINGYKNVLAVAIATDYSYPQAEKVKEYLK 1
           LAA PHMFIN YKNVLAVA+AT+YS+PQA+KVKEYLK
Sbjct: 220 LAAAPHMFINAYKNVLAVAVATEYSFPQADKVKEYLK 256



 Score =  109 bits (273), Expect(3) = 3e-79
 Identities = 51/63 (80%), Positives = 60/63 (95%)
 Frame = -3

Query: 738 MAIKPSKAEKKVQYDKKLCRLLDEYSQVLIVAADNVGSNQLQNIRKGLRGDSVVLMSKNT 559
           MA+KPSKA+KK+ YD+KLC+LLDEYSQ+LI AADNVGSNQLQNIRKGLRGDSVVLM KNT
Sbjct: 1   MAVKPSKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 558 LIR 550
           +++
Sbjct: 61  MMK 63



 Score = 69.7 bits (169), Expect(3) = 3e-79
 Identities = 44/82 (53%), Positives = 48/82 (58%), Gaps = 33/82 (40%)
 Frame = -2

Query: 436 LKEVSEEVAKYKV---------------------------------LNIPTKINKGTVEI 356
           ++EVSEEVAKYKV                                 LNIPTKINKGTVEI
Sbjct: 81  IREVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEI 140

Query: 355 ITPVELIRKG*KVGSSEAALLS 290
           ITPVELI+KG KVGSSEAALL+
Sbjct: 141 ITPVELIKKGDKVGSSEAALLA 162


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