BLASTX nr result

ID: Dioscorea21_contig00016647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016647
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...   126   7e-27
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...   125   1e-26
ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-25
ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|2...   119   8e-25
gb|AFW72506.1| hypothetical protein ZEAMMB73_355079 [Zea mays]        118   2e-24

>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
            gi|449498657|ref|XP_004160597.1| PREDICTED: WD
            repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score =  126 bits (317), Expect = 7e-27
 Identities = 84/215 (39%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
 Frame = -3

Query: 961  SQISASFTTSGDHVISASEDSQVYIWRYGIDSRPSRRKGVIPVTQSYEYFHCKDVTVAVP 782
            SQISA  +++G +VISASEDS VY+W++  DSRPSR KGV  V +SYE+FHC+DV+VA+P
Sbjct: 725  SQISACLSSNGRYVISASEDSHVYVWKHEADSRPSRSKGV-TVVRSYEHFHCQDVSVAIP 783

Query: 781  WPGMNVGTTTAAQNDRLND-------LDETFQANF---NLQSEANEQEGMPTYRCTNGSQ 632
            WPGM  G T    +D   D       +DE   AN     +++E   ++ +    CTN   
Sbjct: 784  WPGM--GDTWGLNDDYCGDDNVIENHIDEVSSANHPPSPVEAENGSEDSVLASGCTNSPL 841

Query: 631  QDCILNTNSSNFGDRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNA 452
               + +  +S F DRIS                                          +
Sbjct: 842  HGTLSSATNSYFFDRISATWPEEKLILNTRNNRSPHSSMDIA-----------------S 884

Query: 451  GMFLQSSSALGLVIVTAGRGGEIKIHQNFGLPVRI 347
            GMF Q SSA G+VIVTAG  GEI+  QNFG PV+I
Sbjct: 885  GMF-QGSSAWGMVIVTAGLRGEIRTFQNFGFPVKI 918


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
            gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 944

 Score =  125 bits (315), Expect = 1e-26
 Identities = 83/213 (38%), Positives = 105/213 (49%), Gaps = 8/213 (3%)
 Frame = -3

Query: 961  SQISASFTTSGDHVISASEDSQVYIWRYGIDSRPSRRKGVIPVTQSYEYFHCKDVTVAVP 782
            SQISAS T +G +V+SASEDS VY+W++  +SRPSR KGV  +T+SYE+FHC+DV+VA+P
Sbjct: 752  SQISASLTANGKYVVSASEDSYVYVWKHEAESRPSRNKGV-TITRSYEHFHCQDVSVAIP 810

Query: 781  WPGMN-----VGTTTAAQNDRLNDLDETFQANF---NLQSEANEQEGMPTYRCTNGSQQD 626
            WPGM        T    QN   N LDE   AN     ++  ++         CTN     
Sbjct: 811  WPGMGDIWGLQDTLPGEQNGLDNHLDEVSIANHPPTPVEEISSNNGSQSLSGCTNSPLNG 870

Query: 625  CILNTNSSNFGDRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNAGM 446
             I +  +  F DRIS                                          A  
Sbjct: 871  IICSATNGYFFDRISATWPEEKLNLATRTWSPRSSVDI-------------------ASG 911

Query: 445  FLQSSSALGLVIVTAGRGGEIKIHQNFGLPVRI 347
              Q+ SA G+VIVTAG  GEI+  QNFGLPVRI
Sbjct: 912  MSQNMSAYGMVIVTAGLRGEIRTFQNFGLPVRI 944


>ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|222860577|gb|EEE98124.1|
            predicted protein [Populus trichocarpa]
          Length = 882

 Score =  122 bits (305), Expect = 2e-25
 Identities = 85/212 (40%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
 Frame = -3

Query: 961  SQISASFTTSGDHVISASEDSQVYIWRYGIDSRPSRRKGVIPVTQSYEYFHCKDVTVAVP 782
            SQISAS TT+G +V+SASEDS VY+W++  DSR SR KGV  +T+SYE+F C+DV+VA+P
Sbjct: 691  SQISASLTTNGKYVVSASEDSYVYVWKHEADSRLSRSKGV-TITRSYEHFLCQDVSVAIP 749

Query: 781  WPGMN-----VGTTTAAQNDRLNDLDETFQANF--NLQSEANEQEGMPTYRCTNGSQQDC 623
            WPGM        T +  QN   N LDE    N       EA+ +       CTN      
Sbjct: 750  WPGMADTWGLQDTLSGEQNGLDNHLDEVSIVNHPPTPVEEASNEGSQSLTGCTNSPMNGI 809

Query: 622  ILNTNSSNFGDRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNAGMF 443
            I +  +  F DRIS                                        SN    
Sbjct: 810  ISSATNGYFFDRIS-----------------ATWPEEKLDLATRTRSHHASVDISNG--L 850

Query: 442  LQSSSALGLVIVTAGRGGEIKIHQNFGLPVRI 347
             Q+ SA G+VIVTAG  GEI+  QNFGLPVRI
Sbjct: 851  SQNVSAYGMVIVTAGLRGEIRTFQNFGLPVRI 882


>ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|222869816|gb|EEF06947.1|
            predicted protein [Populus trichocarpa]
          Length = 799

 Score =  119 bits (299), Expect = 8e-25
 Identities = 84/212 (39%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
 Frame = -3

Query: 961  SQISASFTTSGDHVISASEDSQVYIWRYGIDSRPSRRKGVIPVTQSYEYFHCKDVTVAVP 782
            SQISAS T +G +V+SASEDS VY+W++  DSR SR KGV  VT SYE+FHC+D +VA+P
Sbjct: 608  SQISASLTANGKYVVSASEDSYVYVWKHEADSRLSRSKGV-TVTSSYEHFHCQDASVAIP 666

Query: 781  WPGMN-----VGTTTAAQNDRLNDLDETFQANF--NLQSEANEQEGMPTYRCTNGSQQDC 623
            WPGM        T +  Q+   N LDE    N       EA+ +       CTN      
Sbjct: 667  WPGMGDTWELQDTLSGEQSGLDNHLDEVSIVNHPPTPVEEASIEGSQSLSGCTNSPLNGI 726

Query: 622  ILNTNSSNFGDRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNAGMF 443
            I +  +  F DRIS                                        SN    
Sbjct: 727  ISSATNGYFFDRIS-----------------ATWPEEKLNLATRTRSPHASVDISNG--L 767

Query: 442  LQSSSALGLVIVTAGRGGEIKIHQNFGLPVRI 347
             +S SA G+VIVTAG  GEI+  QNFGLPVRI
Sbjct: 768  SESVSAYGMVIVTAGLRGEIRTFQNFGLPVRI 799


>gb|AFW72506.1| hypothetical protein ZEAMMB73_355079 [Zea mays]
          Length = 783

 Score =  118 bits (296), Expect = 2e-24
 Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
 Frame = -3

Query: 961  SQISASFTTSGDHVISASEDSQVYIWRYGIDSRPSRRKGVIPVTQSYEYFHCKDVTVAVP 782
            SQISA    +G ++ISASEDS VYIWR     +PSR+KG++ VT S+EYFHC+ VTVAV 
Sbjct: 602  SQISACLAGNGRYIISASEDSHVYIWRNNDGPKPSRKKGIVSVTDSHEYFHCQSVTVAVT 661

Query: 781  WPGMNVGTTTAAQNDRLNDLDETFQANFNLQSEANEQEGMP--TYRCTNGSQQDCILNTN 608
            WP  +   T      +  +L+   +   +LQ++  + + MP   YR TN +      N +
Sbjct: 662  WPFASTAMTCLMNPGKQEELERGSEPQ-DLQTKLAKAQEMPDVEYRSTNITS-----NNS 715

Query: 607  SSNFGDRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSNAGMFLQSSS 428
            + N GDR S                                        +N G    + S
Sbjct: 716  NHNNGDRTS-------------------PTWPEKLNTPPNQSLRATTCHANEGDQALNRS 756

Query: 427  ALGLVIVTAGRGGEIKIHQNFGLPVRI 347
            A GLVIVTAGRGG+I+  QNFG PVR+
Sbjct: 757  AWGLVIVTAGRGGQIRTFQNFGFPVRV 783