BLASTX nr result

ID: Dioscorea21_contig00016644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016644
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301660.1| cc-nbs-lrr resistance protein [Populus trich...   102   4e-20
ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichoca...   101   5e-20
ref|XP_002336233.1| cc-nbs-lrr resistance protein [Populus trich...   101   7e-20
ref|XP_002457824.1| hypothetical protein SORBIDRAFT_03g014426 [S...   100   9e-20
ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...   100   1e-19

>ref|XP_002301660.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222843386|gb|EEE80933.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1082

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   EWQAVLEHETRKLQHTENKIKPELWLSYVDLPTHLKKCFAFCAIYPKDHDIDEVELIQLW 181
           EW AV E E   L+   +KI P L LSY +L  HLK+CFA+CAI+PKD  +   EL+ LW
Sbjct: 381 EWIAVKESEIWDLREEASKILPALRLSYTNLSPHLKQCFAYCAIFPKDRVMGREELVALW 440

Query: 182 MAHGLIASQKGNDMEVEGREIFTELIRRSLLQYHYYLRASTIGRV-CKMHDLI 337
           MA+G I+ +K  D+ V G EIF EL+ RS LQ    ++    G + CKMHDL+
Sbjct: 441 MANGFISCRKEMDLHVMGIEIFNELVGRSFLQ---EVQDDGFGNITCKMHDLM 490


>ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844631|gb|EEE82178.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 968

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   EWQAVLEHETRKLQHTENKIKPELWLSYVDLPTHLKKCFAFCAIYPKDHDIDEVELIQLW 181
           +W AV E E   L+   +KI P L LSY +L  HLK+CFA+CAI+PKDH +   EL+ LW
Sbjct: 266 QWIAVKESEIWDLREEASKILPALRLSYTNLSPHLKQCFAYCAIFPKDHVMSREELVALW 325

Query: 182 MAHGLIASQKGNDMEVEGREIFTELIRRSLLQYHYYLRASTIGRV-CKMHDLI 337
           MA+G I+ ++  D+ V G EIF EL+ RS +Q    +     G + CKMHDL+
Sbjct: 326 MANGFISCRREMDLHVIGIEIFNELVGRSFMQ---EVEDDGFGNITCKMHDLM 375


>ref|XP_002336233.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832784|gb|EEE71261.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 808

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/112 (49%), Positives = 70/112 (62%)
 Frame = +2

Query: 2   EWQAVLEHETRKLQHTENKIKPELWLSYVDLPTHLKKCFAFCAIYPKDHDIDEVELIQLW 181
           +W AV E E   L+   +KI P L LSY +L  HLK+CFA+CAI+PKDH +   EL+ LW
Sbjct: 381 QWIAVKESEIWDLREEASKILPALRLSYTNLSPHLKQCFAYCAIFPKDHVMRREELVALW 440

Query: 182 MAHGLIASQKGNDMEVEGREIFTELIRRSLLQYHYYLRASTIGRVCKMHDLI 337
           MA+G I+ +K  D+ V G EIF EL+ RS LQ         I   CKMHDL+
Sbjct: 441 MANGFISCKKEMDLHVMGIEIFNELVGRSFLQEVEDDGFDNI--TCKMHDLM 490


>ref|XP_002457824.1| hypothetical protein SORBIDRAFT_03g014426 [Sorghum bicolor]
           gi|241929799|gb|EES02944.1| hypothetical protein
           SORBIDRAFT_03g014426 [Sorghum bicolor]
          Length = 1619

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   EWQAVLEHETRKLQHT-ENKIKPELWLSYVDLPTHLKKCFAFCAIYPKDHDIDEVELIQL 178
           EW+AV   +++ + H  E+KI P L LSY DLP+++K+CFAFCA+YPKD +ID   LIQL
Sbjct: 385 EWKAV---QSKSIAHNKEDKILPILKLSYDDLPSYMKQCFAFCAVYPKDTEIDMEHLIQL 441

Query: 179 WMAHGLIASQKGNDMEVEGREIFTELIRRSLLQYHYYLRASTIG---------RVCKMHD 331
           WMA+G +  +K   +E  G+ IF EL+ RS  Q    ++  + G           CK+HD
Sbjct: 442 WMANGFVPKEKDIRLETTGKHIFQELVSRSFFQDVKQIKGDSEGSDVDWYCPSTTCKIHD 501

Query: 332 LI 337
           L+
Sbjct: 502 LM 503


>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1063

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   EWQAVLEHETRKLQHTENKIKPELWLSYVDLPTHLKKCFAFCAIYPKDHDIDEVELIQLW 181
           +W AV E E   L+   +KI P L LSY +L  HLK+CFA+CAI+PKDH +   EL+ LW
Sbjct: 347 QWIAVKESEIWDLREEASKILPALRLSYTNLSPHLKQCFAYCAIFPKDHVMRREELVALW 406

Query: 182 MAHGLIASQKGNDMEVEGREIFTELIRRSLLQYHYYLRASTIGRV-CKMHDLI 337
           MA+G I+ ++  ++ V G EIF EL+ RS LQ    +     G + CKMHDL+
Sbjct: 407 MANGFISGRREMNLHVMGIEIFNELVGRSFLQ---EVGDDGFGNITCKMHDLV 456


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